RNA–Protein interactions for RNA: ENST00000468211.6

PTCH1-210, Transcript of patched 1, humanhuman

TSL 1 (best) BASIC

Gene PTCH1, Length 1,254 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTCH1-210ENST00000468211 CD72P21854 359 aa26.62■■□□□ 1.85
PTCH1-210ENST00000468211 FCARP24071 287 aa26.62■■□□□ 1.85
PTCH1-210ENST00000468211 MSTO1Q9BUK6 570 aa26.62■■□□□ 1.85
PTCH1-210ENST00000468211 CCSER1Q9C0I3 900 aa26.62■■□□□ 1.85
PTCH1-210ENST00000468211 IKZF4Q9H2S9 585 aa26.62■■□□□ 1.85
PTCH1-210ENST00000468211 RPF1Q9H9Y2 349 aaKnown RBP26.62■■□□□ 1.85
PTCH1-210ENST00000468211 CPSF3Q9UKF6 684 aaKnown RBP26.62■■□□□ 1.85
PTCH1-210ENST00000468211 KANSL1LA0AUZ9 987 aa26.61■■□□□ 1.85
PTCH1-210ENST00000468211 MOSPD3O75425 235 aa26.61■■□□□ 1.85
PTCH1-210ENST00000468211 GTF2BQ00403 316 aa26.61■■□□□ 1.85
PTCH1-210ENST00000468211 YWHAHQ04917 246 aaPredicted RBP26.61■■□□□ 1.85
PTCH1-210ENST00000468211 TWF1Q12792 350 aa26.61■■□□□ 1.85
PTCH1-210ENST00000468211 JADE1Q6IE81 842 aa26.61■■□□□ 1.85
PTCH1-210ENST00000468211 FAM173BQ6P4H8 233 aa26.61■■□□□ 1.85
PTCH1-210ENST00000468211 MAP4K3Q8IVH8 894 aa26.61■■□□□ 1.85
PTCH1-210ENST00000468211 FAM212AQ96EL1 285 aa26.61■■□□□ 1.85
PTCH1-210ENST00000468211 SHDQ96IW2 340 aa26.61■■□□□ 1.85
PTCH1-210ENST00000468211 CRISPLD1Q9H336 500 aa26.61■■□□□ 1.85
PTCH1-210ENST00000468211 R4GN57 208 aa26.61■■□□□ 1.85
PTCH1-210ENST00000468211 GVINP1Q7Z2Y8 2422 aa26.6■■□□□ 1.85
PTCH1-210ENST00000468211 COL4A2P08572 1712 aa26.6■■□□□ 1.85
PTCH1-210ENST00000468211 DDIT3P35638 169 aa26.6■■□□□ 1.85
PTCH1-210ENST00000468211 KYAT1Q16773 422 aa26.6■■□□□ 1.85
PTCH1-210ENST00000468211 FAM78AQ5JUQ0 283 aa26.6■■□□□ 1.85
PTCH1-210ENST00000468211 SPATA1Q5VX52 437 aa26.6■■□□□ 1.85
PTCH1-210ENST00000468211 BEST2Q8NFU1 509 aa26.6■■□□□ 1.85
PTCH1-210ENST00000468211 ZSWIM3Q96MP5 696 aa26.6■■□□□ 1.85
PTCH1-210ENST00000468211 PGLYRP2Q96PD5 576 aa26.6■■□□□ 1.85
PTCH1-210ENST00000468211 TCHHQ07283 1943 aa26.6■■□□□ 1.85
PTCH1-210ENST00000468211 SPTLC1O15269 473 aa26.59■■□□□ 1.85
PTCH1-210ENST00000468211 TBCAO75347 108 aaKnown RBP26.59■■□□□ 1.85
PTCH1-210ENST00000468211 NFICP08651 508 aa26.59■■□□□ 1.85
PTCH1-210ENST00000468211 GJA1P17302 382 aa26.59■■□□□ 1.85
PTCH1-210ENST00000468211 SCP2P22307 547 aa26.59■■□□□ 1.85
PTCH1-210ENST00000468211 ACOT2P49753 483 aa26.59■■□□□ 1.85
PTCH1-210ENST00000468211 PRKCQQ04759 706 aa26.59■■□□□ 1.85
PTCH1-210ENST00000468211 PDZD4Q76G19 769 aaPredicted RBP26.59■■□□□ 1.85
PTCH1-210ENST00000468211 C1orf210Q8IVY1 113 aa26.59■■□□□ 1.85
PTCH1-210ENST00000468211 ELSPBP1Q96BH3 223 aa26.59■■□□□ 1.85
PTCH1-210ENST00000468211 FBXO2Q9UK22 296 aaPredicted RBP26.59■■□□□ 1.85
PTCH1-210ENST00000468211 TICRRQ7Z2Z1 1910 aa26.59■■□□□ 1.85
PTCH1-210ENST00000468211 ZNF292O60281 2723 aa26.58■■□□□ 1.85
PTCH1-210ENST00000468211 SHISA7A6NL88 538 aa26.58■■□□□ 1.85
PTCH1-210ENST00000468211 PFKPQ01813 784 aa26.58■■□□□ 1.85
PTCH1-210ENST00000468211 RESTQ13127 1097 aa26.58■■□□□ 1.85
PTCH1-210ENST00000468211 UBXN2BQ14CS0 331 aa26.58■■□□□ 1.85
PTCH1-210ENST00000468211 DSTYKQ6XUX3 929 aa26.58■■□□□ 1.85
PTCH1-210ENST00000468211 DYMQ7RTS9 669 aa26.58■■□□□ 1.85
PTCH1-210ENST00000468211 MAML2Q8IZL2 1156 aaPredicted RBP26.58■■□□□ 1.85
PTCH1-210ENST00000468211 ZNF512Q96ME7 567 aaPredicted RBP26.58■■□□□ 1.85
PTCH1-210ENST00000468211 CLIC6Q96NY7 704 aa26.58■■□□□ 1.85
PTCH1-210ENST00000468211 MAFFQ9ULX9 164 aa26.58■■□□□ 1.85
PTCH1-210ENST00000468211 YIPF1Q9Y548 306 aa26.58■■□□□ 1.85
PTCH1-210ENST00000468211 ZNF197O14709 1029 aa26.57■■□□□ 1.84
PTCH1-210ENST00000468211 MICAL2O94851 1124 aa26.57■■□□□ 1.84
PTCH1-210ENST00000468211 SP9P0CG40 484 aa26.57■■□□□ 1.84
PTCH1-210ENST00000468211 MYL4P12829 197 aa26.57■■□□□ 1.84
PTCH1-210ENST00000468211 EPHA5P54756 1037 aa26.57■■□□□ 1.84
PTCH1-210ENST00000468211 LILRA4P59901 499 aa26.57■■□□□ 1.84
PTCH1-210ENST00000468211 GRM2Q14416 872 aa26.57■■□□□ 1.84
PTCH1-210ENST00000468211 CYP4A22Q5TCH4 519 aa26.57■■□□□ 1.84
PTCH1-210ENST00000468211 C9orf57Q5W0N0 161 aa26.57■■□□□ 1.84
PTCH1-210ENST00000468211 IQCEQ6IPM2 695 aa26.57■■□□□ 1.84
PTCH1-210ENST00000468211 SFR1Q86XK3 245 aa26.57■■□□□ 1.84
PTCH1-210ENST00000468211 ADSSL1Q8N142 457 aa26.57■■□□□ 1.84
PTCH1-210ENST00000468211 ASB16Q96NS5 453 aa26.57■■□□□ 1.84
PTCH1-210ENST00000468211 TMEM209Q96SK2 561 aa26.57■■□□□ 1.84
PTCH1-210ENST00000468211 LTB4R2Q9NPC1 389 aa26.57■■□□□ 1.84
PTCH1-210ENST00000468211 EP300Q09472 2414 aaPredicted RBP26.57■■□□□ 1.84
PTCH1-210ENST00000468211 FAM170BA6NMN3 283 aa26.56■■□□□ 1.84
PTCH1-210ENST00000468211 XPOTO43592 962 aaKnown RBP26.56■■□□□ 1.84
PTCH1-210ENST00000468211 DUSP4Q13115 394 aa26.56■■□□□ 1.84
PTCH1-210ENST00000468211 TPRG1Q6ZUI0 275 aa26.56■■□□□ 1.84
PTCH1-210ENST00000468211 USP37Q86T82 979 aa26.56■■□□□ 1.84
PTCH1-210ENST00000468211 ELMOD1Q8N336 334 aa26.56■■□□□ 1.84
PTCH1-210ENST00000468211 SENP8Q96LD8 212 aa26.56■■□□□ 1.84
PTCH1-210ENST00000468211 TSPAN18Q96SJ8 248 aa26.56■■□□□ 1.84
PTCH1-210ENST00000468211 LRRC3Q9BY71 257 aa26.56■■□□□ 1.84
PTCH1-210ENST00000468211 DNAJC25Q9H1X3 360 aa26.56■■□□□ 1.84
PTCH1-210ENST00000468211 ST6GALNAC4Q9H4F1 302 aa26.56■■□□□ 1.84
PTCH1-210ENST00000468211 HEBP1Q9NRV9 189 aa26.56■■□□□ 1.84
PTCH1-210ENST00000468211 GTF3C5Q9Y5Q8 519 aaPredicted RBP26.56■■□□□ 1.84
PTCH1-210ENST00000468211 NCANO14594 1321 aa26.56■■□□□ 1.84
PTCH1-210ENST00000468211 PIRO00625 290 aa26.55■■□□□ 1.84
PTCH1-210ENST00000468211 TYMPP19971 482 aa26.55■■□□□ 1.84
PTCH1-210ENST00000468211 SYT1P21579 422 aa26.55■■□□□ 1.84
PTCH1-210ENST00000468211 TARSP26639 723 aaKnown RBP26.55■■□□□ 1.84
PTCH1-210ENST00000468211 CEBPZQ03701 1054 aaKnown RBP26.55■■□□□ 1.84
PTCH1-210ENST00000468211 GPR17Q13304 367 aa26.55■■□□□ 1.84
PTCH1-210ENST00000468211 ADALQ6DHV7 355 aa26.55■■□□□ 1.84
PTCH1-210ENST00000468211 OVOS1Q6IE37 1185 aa26.55■■□□□ 1.84
PTCH1-210ENST00000468211 ZNF720Q7Z2F6 126 aa26.55■■□□□ 1.84
PTCH1-210ENST00000468211 CD302Q8IX05 232 aa26.55■■□□□ 1.84
PTCH1-210ENST00000468211 TTC9BQ8N6N2 239 aa26.55■■□□□ 1.84
PTCH1-210ENST00000468211 KRI1Q8N9T8 703 aaKnown RBP26.55■■□□□ 1.84
PTCH1-210ENST00000468211 ZFP14Q9HCL3 533 aa26.55■■□□□ 1.84
PTCH1-210ENST00000468211 SLC27A5Q9Y2P5 690 aa26.55■■□□□ 1.84
PTCH1-210ENST00000468211 SRPRBQ9Y5M8 271 aaKnown RBP26.55■■□□□ 1.84
PTCH1-210ENST00000468211 STYXL1Q9Y6J8 313 aa26.55■■□□□ 1.84
PTCH1-210ENST00000468211 F5P12259 2224 aa26.54■■□□□ 1.84
Retrieved 100 of 20,778 RNA–protein pairs in 21.5 ms