RNA–Protein interactions for RNA: ENST00000468136.5

MSH5-213, Transcript of mutS homolog 5, humanhuman

TSL 2

Gene MSH5, Length 690 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MSH5-213ENST00000468136 FTCDO95954 541 aa10.87□□□□□ -0.67
MSH5-213ENST00000468136 CST3P01034 146 aaPredicted RBP10.87□□□□□ -0.67
MSH5-213ENST00000468136 CTNNA2P26232 953 aa10.87□□□□□ -0.67
MSH5-213ENST00000468136 HOXA11P31270 313 aaPredicted RBP10.87□□□□□ -0.67
MSH5-213ENST00000468136 WNT7BP56706 349 aa10.87□□□□□ -0.67
MSH5-213ENST00000468136 SNX17Q15036 470 aa10.87□□□□□ -0.67
MSH5-213ENST00000468136 KIZQ2M2Z5 673 aa10.87□□□□□ -0.67
MSH5-213ENST00000468136 TAF3Q5VWG9 929 aa10.87□□□□□ -0.67
MSH5-213ENST00000468136 JADE1Q6IE81 842 aa10.87□□□□□ -0.67
MSH5-213ENST00000468136 MCOLN2Q8IZK6 566 aa10.87□□□□□ -0.67
MSH5-213ENST00000468136 C1orf127Q8N9H9 656 aa10.87□□□□□ -0.67
MSH5-213ENST00000468136 ZNF564Q8TBZ8 553 aaPredicted RBP10.87□□□□□ -0.67
MSH5-213ENST00000468136 MAIP1Q8WWC4 291 aa10.87□□□□□ -0.67
MSH5-213ENST00000468136 CAPNS2Q96L46 248 aa10.87□□□□□ -0.67
MSH5-213ENST00000468136 MMS19Q96T76 1030 aa10.87□□□□□ -0.67
MSH5-213ENST00000468136 BUD13Q9BRD0 619 aaKnown RBP eCLIP10.87□□□□□ -0.679e-11■■■□□ 16.6
MSH5-213ENST00000468136 PARD6BQ9BYG5 372 aa10.87□□□□□ -0.67
MSH5-213ENST00000468136 CELF4Q9BZC1 486 aaKnown RBP10.87□□□□□ -0.67
MSH5-213ENST00000468136 FAM49AQ9H0Q0 323 aaPredicted RBP10.87□□□□□ -0.67
MSH5-213ENST00000468136 CNTN3Q9P232 1028 aa10.87□□□□□ -0.67
MSH5-213ENST00000468136 WDR35Q9P2L0 1181 aa10.87□□□□□ -0.67
MSH5-213ENST00000468136 CNOT8Q9UFF9 292 aaKnown RBP10.87□□□□□ -0.67
MSH5-213ENST00000468136 SBDSQ9Y3A5 250 aaKnown RBP eCLIP10.87□□□□□ -0.67
MSH5-213ENST00000468136 TRPV2Q9Y5S1 764 aa10.87□□□□□ -0.67
MSH5-213ENST00000468136 SQORQ9Y6N5 450 aa10.87□□□□□ -0.67
MSH5-213ENST00000468136 MYO1FO00160 1098 aa10.86□□□□□ -0.67
MSH5-213ENST00000468136 TLR3O15455 904 aaKnown RBP10.86□□□□□ -0.67
MSH5-213ENST00000468136 HMGCRP04035 888 aa10.86□□□□□ -0.67
MSH5-213ENST00000468136 KRT19P08727 400 aa10.86□□□□□ -0.67
MSH5-213ENST00000468136 KCNE1P15382 129 aa10.86□□□□□ -0.67
MSH5-213ENST00000468136 TNFRSF8P28908 595 aa10.86□□□□□ -0.67
MSH5-213ENST00000468136 MAN1A1P33908 653 aa10.86□□□□□ -0.67
MSH5-213ENST00000468136 ASPAP45381 313 aa10.86□□□□□ -0.67
MSH5-213ENST00000468136 GSCP56915 257 aaPredicted RBP10.86□□□□□ -0.67
MSH5-213ENST00000468136 NOMO3P69849 1222 aa10.86□□□□□ -0.67
MSH5-213ENST00000468136 MRPS6P82932 125 aaKnown RBP10.86□□□□□ -0.67
MSH5-213ENST00000468136 INCA1Q0VD86 236 aa10.86□□□□□ -0.67
MSH5-213ENST00000468136 PTP4A2Q12974 167 aa10.86□□□□□ -0.67
MSH5-213ENST00000468136 SEZ6Q53EL9 994 aa10.86□□□□□ -0.67
MSH5-213ENST00000468136 XKR4Q5GH76 650 aa10.86□□□□□ -0.67
MSH5-213ENST00000468136 SPOPLQ6IQ16 392 aa10.86□□□□□ -0.67
MSH5-213ENST00000468136 FBXO38Q6PIJ6 1188 aa10.86□□□□□ -0.67
MSH5-213ENST00000468136 RNF180Q86T96 592 aa10.86□□□□□ -0.67
MSH5-213ENST00000468136 UNC93AQ86WB7 457 aa10.86□□□□□ -0.67
MSH5-213ENST00000468136 GPIHBP1Q8IV16 184 aa10.86□□□□□ -0.67
MSH5-213ENST00000468136 USP38Q8NB14 1042 aa10.86□□□□□ -0.67
MSH5-213ENST00000468136 KLHDC9Q8NEP7 349 aa10.86□□□□□ -0.67
MSH5-213ENST00000468136 GADD45GIP1Q8TAE8 222 aaPredicted RBP10.86□□□□□ -0.67
MSH5-213ENST00000468136 COG1Q8WTW3 980 aa10.86□□□□□ -0.67
MSH5-213ENST00000468136 DNAJB3Q8WWF6 145 aa10.86□□□□□ -0.67
MSH5-213ENST00000468136 ZNF606Q8WXB4 792 aa10.86□□□□□ -0.67
MSH5-213ENST00000468136 TRIB2Q92519 343 aa10.86□□□□□ -0.67
MSH5-213ENST00000468136 KIF12Q96FN5 646 aa10.86□□□□□ -0.67
MSH5-213ENST00000468136 HPDLQ96IR7 371 aa10.86□□□□□ -0.67
MSH5-213ENST00000468136 CPB2Q96IY4 423 aa10.86□□□□□ -0.67
MSH5-213ENST00000468136 CAPZA3Q96KX2 299 aa10.86□□□□□ -0.67
MSH5-213ENST00000468136 SNX27Q96L92 541 aa10.86□□□□□ -0.67
MSH5-213ENST00000468136 ZNF560Q96MR9 790 aa10.86□□□□□ -0.67
MSH5-213ENST00000468136 TSEN34Q9BSV6 310 aaKnown RBP10.86□□□□□ -0.67
MSH5-213ENST00000468136 NUP85Q9BW27 656 aa10.86□□□□□ -0.67
MSH5-213ENST00000468136 ACBD3Q9H3P7 528 aa10.86□□□□□ -0.67
MSH5-213ENST00000468136 SLITRK6Q9H5Y7 841 aa10.86□□□□□ -0.67
MSH5-213ENST00000468136 PARVAQ9NVD7 372 aa10.86□□□□□ -0.67
MSH5-213ENST00000468136 DPP3Q9NY33 737 aa10.86□□□□□ -0.67
MSH5-213ENST00000468136 TAS2R14Q9NYV8 317 aa10.86□□□□□ -0.67
MSH5-213ENST00000468136 ADAM22Q9P0K1 906 aa10.86□□□□□ -0.67
MSH5-213ENST00000468136 NOL12Q9UGY1 213 aaKnown RBP eCLIP10.86□□□□□ -0.67
MSH5-213ENST00000468136 SRRDQ9UH36 339 aa10.86□□□□□ -0.67
MSH5-213ENST00000468136 ALG6Q9Y672 507 aa10.86□□□□□ -0.67
MSH5-213ENST00000468136 V9GYY5 206 aaPredicted RBP10.86□□□□□ -0.67
MSH5-213ENST00000468136 MGAMO43451 1857 aa10.86□□□□□ -0.67
MSH5-213ENST00000468136 MOXD2PA6NHM9 499 aa10.85□□□□□ -0.67
MSH5-213ENST00000468136 GPR182O15218 404 aa10.85□□□□□ -0.67
MSH5-213ENST00000468136 TREHO43280 583 aa10.85□□□□□ -0.67
MSH5-213ENST00000468136 SRGAP2O75044 1071 aa10.85□□□□□ -0.67
MSH5-213ENST00000468136 ADAMTS4O75173 837 aa10.85□□□□□ -0.67
MSH5-213ENST00000468136 NPTXRO95502 500 aa10.85□□□□□ -0.67
MSH5-213ENST00000468136 ITGB3P05106 788 aa10.85□□□□□ -0.67
MSH5-213ENST00000468136 NFICP08651 508 aa10.85□□□□□ -0.67
MSH5-213ENST00000468136 VDRP11473 427 aa10.85□□□□□ -0.67
MSH5-213ENST00000468136 SKIP12755 728 aa10.85□□□□□ -0.67
MSH5-213ENST00000468136 MMP8P22894 467 aa10.85□□□□□ -0.67
MSH5-213ENST00000468136 CETN2P41208 172 aa10.85□□□□□ -0.67
MSH5-213ENST00000468136 RAB27AP51159 221 aa10.85□□□□□ -0.67
MSH5-213ENST00000468136 CLCN6P51797 869 aa10.85□□□□□ -0.67
MSH5-213ENST00000468136 OSTNP61366 133 aa10.85□□□□□ -0.67
MSH5-213ENST00000468136 GPS2Q13227 327 aa10.85□□□□□ -0.67
MSH5-213ENST00000468136 ZBTB6Q15916 424 aa10.85□□□□□ -0.67
MSH5-213ENST00000468136 WDR72Q3MJ13 1102 aa10.85□□□□□ -0.67
MSH5-213ENST00000468136 SEL1L2Q5TEA6 688 aa10.85□□□□□ -0.67
MSH5-213ENST00000468136 PLEKHA7Q6IQ23 1121 aa10.85□□□□□ -0.67
MSH5-213ENST00000468136 CYP4F22Q6NT55 531 aa10.85□□□□□ -0.67
MSH5-213ENST00000468136 ALKAL1Q6UXT8 129 aa10.85□□□□□ -0.67
MSH5-213ENST00000468136 MON1BQ7L1V2 547 aa10.85□□□□□ -0.67
MSH5-213ENST00000468136 MAATS1Q7Z4T9 603 aa10.85□□□□□ -0.67
MSH5-213ENST00000468136 PALB2Q86YC2 1186 aa10.85□□□□□ -0.67
MSH5-213ENST00000468136 CEP120Q8N960 986 aa10.85□□□□□ -0.67
MSH5-213ENST00000468136 LRRN4CLQ8ND94 238 aa10.85□□□□□ -0.67
MSH5-213ENST00000468136 TRPV1Q8NER1 839 aa10.85□□□□□ -0.67
MSH5-213ENST00000468136 CCDC26Q8TAB7 109 aa10.85□□□□□ -0.67
Retrieved 100 of 20,778 RNA–protein pairs in 20.8 ms