RNA–Protein interactions for RNA: ENST00000467171.2

APOBEC1-202, Transcript of apolipoprotein B mRNA editing enzyme catalytic subunit 1, humanhuman

TSL 1 (best)

Gene APOBEC1, Length 861 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
APOBEC1-202ENST00000467171 CLEC16AQ2KHT3 1053 aa10.21□□□□□ -0.77
APOBEC1-202ENST00000467171 KIZQ2M2Z5 673 aa10.21□□□□□ -0.77
APOBEC1-202ENST00000467171 DEFB115Q30KQ5 88 aa10.21□□□□□ -0.77
APOBEC1-202ENST00000467171 SLC10A6Q3KNW5 377 aa10.21□□□□□ -0.77
APOBEC1-202ENST00000467171 SPOPLQ6IQ16 392 aa10.21□□□□□ -0.77
APOBEC1-202ENST00000467171 ACAD10Q6JQN1 1059 aa10.21□□□□□ -0.77
APOBEC1-202ENST00000467171 RUFY4Q6ZNE9 571 aa10.21□□□□□ -0.77
APOBEC1-202ENST00000467171 RPAINQ86UA6 219 aa10.21□□□□□ -0.77
APOBEC1-202ENST00000467171 CREG2Q8IUH2 290 aa10.21□□□□□ -0.77
APOBEC1-202ENST00000467171 C7orf31Q8N865 590 aa10.21□□□□□ -0.77
APOBEC1-202ENST00000467171 CXorf38Q8TB03 319 aa10.21□□□□□ -0.77
APOBEC1-202ENST00000467171 SLC35G2Q8TBE7 412 aa10.21□□□□□ -0.77
APOBEC1-202ENST00000467171 FAM84AQ96KN4 292 aa10.21□□□□□ -0.77
APOBEC1-202ENST00000467171 CAPNS2Q96L46 248 aa10.21□□□□□ -0.77
APOBEC1-202ENST00000467171 ACAP3Q96P50 834 aa10.21□□□□□ -0.77
APOBEC1-202ENST00000467171 ARID3AQ99856 593 aa10.21□□□□□ -0.77
APOBEC1-202ENST00000467171 CCDC94Q9BW85 323 aaPredicted RBP10.21□□□□□ -0.77
APOBEC1-202ENST00000467171 PRKD2Q9BZL6 878 aa10.21□□□□□ -0.77
APOBEC1-202ENST00000467171 ARHGAP39Q9C0H5 1083 aa10.21□□□□□ -0.77
APOBEC1-202ENST00000467171 ABCB6Q9NP58 842 aa10.21□□□□□ -0.77
APOBEC1-202ENST00000467171 SEPT11Q9NVA2 429 aaKnown RBP10.21□□□□□ -0.77
APOBEC1-202ENST00000467171 GTF3C4Q9UKN8 822 aa10.21□□□□□ -0.77
APOBEC1-202ENST00000467171 GABRQQ9UN88 632 aa10.21□□□□□ -0.77
APOBEC1-202ENST00000467171 MROH7Q68CQ1 1323 aa10.21□□□□□ -0.78
APOBEC1-202ENST00000467171 TREHO43280 583 aa10.2□□□□□ -0.78
APOBEC1-202ENST00000467171 SRGAP2O75044 1071 aa10.2□□□□□ -0.78
APOBEC1-202ENST00000467171 CSDE1O75534 798 aaKnown RBP10.2□□□□□ -0.78
APOBEC1-202ENST00000467171 TBC1D8O95759 1140 aa10.2□□□□□ -0.78
APOBEC1-202ENST00000467171 MYBL1P10243 752 aa10.2□□□□□ -0.78
APOBEC1-202ENST00000467171 RARBP10826 455 aa10.2□□□□□ -0.78
APOBEC1-202ENST00000467171 UNGP13051 313 aaPredicted RBP10.2□□□□□ -0.78
APOBEC1-202ENST00000467171 H2AFXP16104 143 aaPredicted RBP10.2□□□□□ -0.78
APOBEC1-202ENST00000467171 CST5P28325 142 aaPredicted RBP10.2□□□□□ -0.78
APOBEC1-202ENST00000467171 RPS6KA1Q15418 735 aa10.2□□□□□ -0.78
APOBEC1-202ENST00000467171 ZNF699Q32M78 642 aa10.2□□□□□ -0.78
APOBEC1-202ENST00000467171 NOTUMQ6P988 496 aa10.2□□□□□ -0.78
APOBEC1-202ENST00000467171 SLC27A1Q6PCB7 646 aa10.2□□□□□ -0.78
APOBEC1-202ENST00000467171 CATSPER4Q7RTX7 472 aa10.2□□□□□ -0.78
APOBEC1-202ENST00000467171 SESTD1Q86VW0 696 aa10.2□□□□□ -0.78
APOBEC1-202ENST00000467171 CDR2LQ86X02 465 aaPredicted RBP10.2□□□□□ -0.78
APOBEC1-202ENST00000467171 TMEM192Q8IY95 271 aa10.2□□□□□ -0.78
APOBEC1-202ENST00000467171 C1orf127Q8N9H9 656 aa10.2□□□□□ -0.78
APOBEC1-202ENST00000467171 RBBP8NLQ8NC74 664 aaPredicted RBP10.2□□□□□ -0.78
APOBEC1-202ENST00000467171 MSANTD4Q8NCY6 345 aa10.2□□□□□ -0.78
APOBEC1-202ENST00000467171 KLHDC9Q8NEP7 349 aa10.2□□□□□ -0.78
APOBEC1-202ENST00000467171 DNAJB3Q8WWF6 145 aa10.2□□□□□ -0.78
APOBEC1-202ENST00000467171 TRIM11Q96F44 468 aa10.2□□□□□ -0.78
APOBEC1-202ENST00000467171 CPB2Q96IY4 423 aa10.2□□□□□ -0.78
APOBEC1-202ENST00000467171 VCPIP1Q96JH7 1222 aa10.2□□□□□ -0.78
APOBEC1-202ENST00000467171 PBKQ96KB5 322 aa10.2□□□□□ -0.78
APOBEC1-202ENST00000467171 FAM49AQ9H0Q0 323 aaPredicted RBP10.2□□□□□ -0.78
APOBEC1-202ENST00000467171 THAP2Q9H0W7 228 aa10.2□□□□□ -0.78
APOBEC1-202ENST00000467171 CYP3A43Q9HB55 503 aa10.2□□□□□ -0.78
APOBEC1-202ENST00000467171 AVENQ9NQS1 362 aaPredicted RBP10.2□□□□□ -0.78
APOBEC1-202ENST00000467171 UTP3Q9NQZ2 479 aaKnown RBP eCLIP10.2□□□□□ -0.78
APOBEC1-202ENST00000467171 UVRAGQ9P2Y5 699 aa10.2□□□□□ -0.78
APOBEC1-202ENST00000467171 PUF60Q9UHX1 559 aaKnown RBP10.2□□□□□ -0.78
APOBEC1-202ENST00000467171 SIX4Q9UIU6 781 aa10.2□□□□□ -0.78
APOBEC1-202ENST00000467171 STXBP5LQ9Y2K9 1186 aa10.2□□□□□ -0.78
APOBEC1-202ENST00000467171 PCDHB4Q9Y5E5 795 aa10.2□□□□□ -0.78
APOBEC1-202ENST00000467171 UMODL1Q5DID0 1318 aa10.19□□□□□ -0.78
APOBEC1-202ENST00000467171 MYADML2A6NDP7 307 aa10.19□□□□□ -0.78
APOBEC1-202ENST00000467171 TULP1O00294 542 aaPredicted RBP10.19□□□□□ -0.78
APOBEC1-202ENST00000467171 AOC2O75106 756 aa10.19□□□□□ -0.78
APOBEC1-202ENST00000467171 ADAMTS4O75173 837 aa10.19□□□□□ -0.78
APOBEC1-202ENST00000467171 KIF4AO95239 1232 aa10.19□□□□□ -0.78
APOBEC1-202ENST00000467171 FTCDO95954 541 aa10.19□□□□□ -0.78
APOBEC1-202ENST00000467171 GNRH1P01148 92 aa10.19□□□□□ -0.78
APOBEC1-202ENST00000467171 NFICP08651 508 aa10.19□□□□□ -0.78
APOBEC1-202ENST00000467171 C6orf222P0C671 652 aaPredicted RBP10.19□□□□□ -0.78
APOBEC1-202ENST00000467171 MAP2K2P36507 400 aa10.19□□□□□ -0.78
APOBEC1-202ENST00000467171 ASPAP45381 313 aa10.19□□□□□ -0.78
APOBEC1-202ENST00000467171 OSTNP61366 133 aa10.19□□□□□ -0.78
APOBEC1-202ENST00000467171 CENPCQ03188 943 aa10.19□□□□□ -0.78
APOBEC1-202ENST00000467171 CACNB2Q08289 660 aaPredicted RBP10.19□□□□□ -0.78
APOBEC1-202ENST00000467171 TMEM132DQ14C87 1099 aa10.19□□□□□ -0.78
APOBEC1-202ENST00000467171 SNX17Q15036 470 aa10.19□□□□□ -0.78
APOBEC1-202ENST00000467171 CFAP221Q4G0U5 840 aa10.19□□□□□ -0.78
APOBEC1-202ENST00000467171 GNASQ5JWF2 1037 aa10.19□□□□□ -0.78
APOBEC1-202ENST00000467171 TEX35Q5T0J7 233 aa10.19□□□□□ -0.78
APOBEC1-202ENST00000467171 MAP3K21Q5TCX8 1036 aa10.19□□□□□ -0.78
APOBEC1-202ENST00000467171 TAF3Q5VWG9 929 aa10.19□□□□□ -0.78
APOBEC1-202ENST00000467171 JADE1Q6IE81 842 aa10.19□□□□□ -0.78
APOBEC1-202ENST00000467171 C11orf63Q6NUN7 778 aa10.19□□□□□ -0.78
APOBEC1-202ENST00000467171 TMEM270Q6UE05 265 aa10.19□□□□□ -0.78
APOBEC1-202ENST00000467171 MMGT1Q8N4V1 131 aa10.19□□□□□ -0.78
APOBEC1-202ENST00000467171 TTC39CQ8N584 583 aa10.19□□□□□ -0.78
APOBEC1-202ENST00000467171 COG1Q8WTW3 980 aa10.19□□□□□ -0.78
APOBEC1-202ENST00000467171 ARHGEF26Q96DR7 871 aa10.19□□□□□ -0.78
APOBEC1-202ENST00000467171 RPS6KC1Q96S38 1066 aa10.19□□□□□ -0.78
APOBEC1-202ENST00000467171 PPP1R16BQ96T49 567 aa10.19□□□□□ -0.78
APOBEC1-202ENST00000467171 MMS19Q96T76 1030 aa10.19□□□□□ -0.78
APOBEC1-202ENST00000467171 OSMRQ99650 979 aa10.19□□□□□ -0.78
APOBEC1-202ENST00000467171 BCO2Q9BYV7 579 aa10.19□□□□□ -0.78
APOBEC1-202ENST00000467171 NOL12Q9UGY1 213 aaKnown RBP eCLIP10.19□□□□□ -0.78
APOBEC1-202ENST00000467171 SRRDQ9UH36 339 aa10.19□□□□□ -0.78
APOBEC1-202ENST00000467171 GTF2IRD1Q9UHL9 959 aa10.19□□□□□ -0.78
APOBEC1-202ENST00000467171 ITGA11Q9UKX5 1188 aa10.19□□□□□ -0.78
APOBEC1-202ENST00000467171 RAB21Q9UL25 225 aa10.19□□□□□ -0.78
APOBEC1-202ENST00000467171 V9GYY5 206 aaPredicted RBP10.19□□□□□ -0.78
Retrieved 100 of 20,778 RNA–protein pairs in 38.6 ms