RNA–Protein interactions for RNA: ENST00000466732.2

VPS13D-203, Transcript of vacuolar protein sorting 13 homolog D, humanhuman

TSL 5

Gene VPS13D, Length 377 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS13D-203ENST00000466732 SIDT1Q9NXL6 827 aaKnown RBP5.08□□□□□ -1.6
VPS13D-203ENST00000466732 C11orf21Q9P2W6 132 aa5.08□□□□□ -1.6
VPS13D-203ENST00000466732 ANKRD6Q9Y2G4 727 aa5.08□□□□□ -1.6
VPS13D-203ENST00000466732 PCDHA3Q9Y5H8 950 aa5.08□□□□□ -1.6
VPS13D-203ENST00000466732 SLC16A6O15403 523 aa5.07□□□□□ -1.6
VPS13D-203ENST00000466732 ABLIM3O94929 683 aa5.07□□□□□ -1.6
VPS13D-203ENST00000466732 ARIH2O95376 493 aa5.07□□□□□ -1.6
VPS13D-203ENST00000466732 PF4V1P10720 104 aa5.07□□□□□ -1.6
VPS13D-203ENST00000466732 FDXRP22570 491 aa5.07□□□□□ -1.6
VPS13D-203ENST00000466732 CYP2C19P33261 490 aa5.07□□□□□ -1.6
VPS13D-203ENST00000466732 HK3P52790 923 aa5.07□□□□□ -1.6
VPS13D-203ENST00000466732 INHBEP58166 350 aa5.07□□□□□ -1.6
VPS13D-203ENST00000466732 NOGQ13253 232 aa5.07□□□□□ -1.6
VPS13D-203ENST00000466732 PGS1Q32NB8 556 aa5.07□□□□□ -1.6
VPS13D-203ENST00000466732 COLGALT2Q8IYK4 626 aa5.07□□□□□ -1.6
VPS13D-203ENST00000466732 AOPEPQ8N6M6 819 aa5.07□□□□□ -1.6
VPS13D-203ENST00000466732 SLC17A8Q8NDX2 589 aa5.07□□□□□ -1.6
VPS13D-203ENST00000466732 NUP88Q99567 741 aaPredicted RBP5.07□□□□□ -1.6
VPS13D-203ENST00000466732 IMPG2Q9BZV3 1241 aa5.07□□□□□ -1.6
VPS13D-203ENST00000466732 TBCCD1Q9NVR7 557 aa5.07□□□□□ -1.6
VPS13D-203ENST00000466732 CTTNBP2NLQ9P2B4 639 aa5.07□□□□□ -1.6
VPS13D-203ENST00000466732 MAST3O60307 1309 aa5.06□□□□□ -1.6
VPS13D-203ENST00000466732 A0A1W2PS29 197 aa5.06□□□□□ -1.6
VPS13D-203ENST00000466732 ESRRBO95718 433 aa5.06□□□□□ -1.6
VPS13D-203ENST00000466732 LMNAP02545 664 aaKnown RBP5.06□□□□□ -1.6
VPS13D-203ENST00000466732 FTLP02792 175 aaPredicted RBP5.06□□□□□ -1.6
VPS13D-203ENST00000466732 ANXA1P04083 346 aa5.06□□□□□ -1.6
VPS13D-203ENST00000466732 FTH1P19P0C7X4 201 aa5.06□□□□□ -1.6
VPS13D-203ENST00000466732 KCNA2P16389 499 aa5.06□□□□□ -1.6
VPS13D-203ENST00000466732 PRDX5P30044 214 aa5.06□□□□□ -1.6
VPS13D-203ENST00000466732 MPLP40238 635 aa5.06□□□□□ -1.6
VPS13D-203ENST00000466732 MAP2K6P52564 334 aa5.06□□□□□ -1.6
VPS13D-203ENST00000466732 ZNF844Q08AG5 666 aa5.06□□□□□ -1.6
VPS13D-203ENST00000466732 PIN1Q13526 163 aaPredicted RBP5.06□□□□□ -1.6
VPS13D-203ENST00000466732 SMN1Q16637 294 aaKnown RBP5.06□□□□□ -1.6
VPS13D-203ENST00000466732 HEATR3Q7Z4Q2 680 aa5.06□□□□□ -1.6
VPS13D-203ENST00000466732 FAM90A1Q86YD7 464 aa5.06□□□□□ -1.6
VPS13D-203ENST00000466732 CFAP52Q8N1V2 620 aa5.06□□□□□ -1.6
VPS13D-203ENST00000466732 SLC44A3Q8N4M1 653 aa5.06□□□□□ -1.6
VPS13D-203ENST00000466732 PDPRQ8NCN5 879 aa5.06□□□□□ -1.6
VPS13D-203ENST00000466732 NSUN7Q8NE18 718 aaKnown RBP5.06□□□□□ -1.6
VPS13D-203ENST00000466732 MVB12AQ96EY5 273 aa5.06□□□□□ -1.6
VPS13D-203ENST00000466732 PTCD3Q96EY7 689 aaKnown RBP5.06□□□□□ -1.6
VPS13D-203ENST00000466732 C1orf43Q9BWL3 253 aa5.06□□□□□ -1.6
VPS13D-203ENST00000466732 BRD9Q9H8M2 597 aa5.06□□□□□ -1.6
VPS13D-203ENST00000466732 CASS4Q9NQ75 786 aa5.06□□□□□ -1.6
VPS13D-203ENST00000466732 GNL3LQ9NVN8 582 aaKnown RBP5.06□□□□□ -1.6
VPS13D-203ENST00000466732 ABCF2Q9UG63 623 aa5.06□□□□□ -1.6
VPS13D-203ENST00000466732 TRGV11A0A075B6L2 103 aa5.05□□□□□ -1.6
VPS13D-203ENST00000466732 PRAMEF33A0A0G2JMD5 474 aa5.05□□□□□ -1.6
VPS13D-203ENST00000466732 E2F8A0AVK6 867 aa5.05□□□□□ -1.6
VPS13D-203ENST00000466732 PRSS29PA6NIE9 313 aa5.05□□□□□ -1.6
VPS13D-203ENST00000466732 E9PLN8 166 aa5.05□□□□□ -1.6
VPS13D-203ENST00000466732 PRAMEF10O60809 474 aa5.05□□□□□ -1.6
VPS13D-203ENST00000466732 GNAI3P08754 354 aa5.05□□□□□ -1.6
VPS13D-203ENST00000466732 CT47B1P0C2W7 299 aaPredicted RBP5.05□□□□□ -1.6
VPS13D-203ENST00000466732 ADRA1BP35368 520 aa5.05□□□□□ -1.6
VPS13D-203ENST00000466732 PSMC1P62191 440 aaKnown RBP5.05□□□□□ -1.6
VPS13D-203ENST00000466732 GNAI1P63096 354 aa5.05□□□□□ -1.6
VPS13D-203ENST00000466732 MPP3Q13368 585 aa5.05□□□□□ -1.6
VPS13D-203ENST00000466732 SP5Q6BEB4 398 aaPredicted RBP5.05□□□□□ -1.6
VPS13D-203ENST00000466732 CLNKQ7Z7G1 428 aa5.05□□□□□ -1.6
VPS13D-203ENST00000466732 PDSS2Q86YH6 399 aa5.05□□□□□ -1.6
VPS13D-203ENST00000466732 SCAMP4Q969E2 229 aa5.05□□□□□ -1.6
VPS13D-203ENST00000466732 TMEM125Q96AQ2 219 aa5.05□□□□□ -1.6
VPS13D-203ENST00000466732 LRIG1Q96JA1 1093 aa5.05□□□□□ -1.6
VPS13D-203ENST00000466732 VKORC1Q9BQB6 163 aa5.05□□□□□ -1.6
VPS13D-203ENST00000466732 RHOBTB2Q9BYZ6 727 aa5.05□□□□□ -1.6
VPS13D-203ENST00000466732 WDCPQ9H6R7 721 aa5.05□□□□□ -1.6
VPS13D-203ENST00000466732 SLAMF7Q9NQ25 335 aa5.05□□□□□ -1.6
VPS13D-203ENST00000466732 KMT5AQ9NQR1 393 aa5.05□□□□□ -1.6
VPS13D-203ENST00000466732 LMBRD1Q9NUN5 540 aa5.05□□□□□ -1.6
VPS13D-203ENST00000466732 RLIMQ9NVW2 624 aa5.05□□□□□ -1.6
VPS13D-203ENST00000466732 NEU2Q9Y3R4 380 aa5.05□□□□□ -1.6
VPS13D-203ENST00000466732 SALL3Q9BXA9 1300 aa5.04□□□□□ -1.6
VPS13D-203ENST00000466732 CCDC195A0A1B0GUA6 201 aa5.04□□□□□ -1.6
VPS13D-203ENST00000466732 AKAP10O43572 662 aa5.04□□□□□ -1.6
VPS13D-203ENST00000466732 SUN1O94901 812 aa5.04□□□□□ -1.6
VPS13D-203ENST00000466732 GJB1P08034 283 aa5.04□□□□□ -1.6
VPS13D-203ENST00000466732 TYRP14679 529 aa5.04□□□□□ -1.6
VPS13D-203ENST00000466732 TYRP1P17643 537 aa5.04□□□□□ -1.6
VPS13D-203ENST00000466732 PLA2G5P39877 138 aa5.04□□□□□ -1.6
VPS13D-203ENST00000466732 PIK3CGP48736 1102 aa5.04□□□□□ -1.6
VPS13D-203ENST00000466732 RAB27AP51159 221 aa5.04□□□□□ -1.6
VPS13D-203ENST00000466732 POU6F2P78424 691 aaPredicted RBP5.04□□□□□ -1.6
VPS13D-203ENST00000466732 FPGSQ05932 587 aa5.04□□□□□ -1.6
VPS13D-203ENST00000466732 PIGFQ07326 219 aa5.04□□□□□ -1.6
VPS13D-203ENST00000466732 ATAT1Q5SQI0 421 aa5.04□□□□□ -1.6
VPS13D-203ENST00000466732 TAPT1Q6NXT6 567 aa5.04□□□□□ -1.6
VPS13D-203ENST00000466732 OLFML1Q6UWY5 402 aa5.04□□□□□ -1.6
VPS13D-203ENST00000466732 Q6ZNX1 250 aa5.04□□□□□ -1.6
VPS13D-203ENST00000466732 LNX2Q8N448 690 aa5.04□□□□□ -1.6
VPS13D-203ENST00000466732 SSH3Q8TE77 659 aa5.04□□□□□ -1.6
VPS13D-203ENST00000466732 HPS3Q969F9 1004 aa5.04□□□□□ -1.6
VPS13D-203ENST00000466732 ZG16BQ96DA0 208 aa5.04□□□□□ -1.6
VPS13D-203ENST00000466732 RTFDC1Q9BY42 306 aaPredicted RBP5.04□□□□□ -1.6
VPS13D-203ENST00000466732 MRPL46Q9H2W6 279 aaKnown RBP5.04□□□□□ -1.6
VPS13D-203ENST00000466732 CFAP97Q9P2B7 532 aa5.04□□□□□ -1.6
VPS13D-203ENST00000466732 FEZ2Q9UHY8 353 aaPredicted RBP5.04□□□□□ -1.6
VPS13D-203ENST00000466732 ZNF180Q9UJW8 692 aa5.04□□□□□ -1.6
Retrieved 100 of 20,778 RNA–protein pairs in 27.6 ms