RNA–Protein interactions for RNA: ENST00000466538.1

CDC42BPA-211, Transcript of CDC42 binding protein kinase alpha, humanhuman

TSL 3

Gene CDC42BPA, Length 568 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDC42BPA-211ENST00000466538 POGKQ9P215 609 aa5.34□□□□□ -1.55
CDC42BPA-211ENST00000466538 FNIP2Q9P278 1114 aa5.34□□□□□ -1.55
CDC42BPA-211ENST00000466538 CORO2BQ9UQ03 480 aa5.34□□□□□ -1.55
CDC42BPA-211ENST00000466538 SH3BP1Q9Y3L3 701 aa5.34□□□□□ -1.55
CDC42BPA-211ENST00000466538 PLEKHM1Q9Y4G2 1056 aa5.34□□□□□ -1.55
CDC42BPA-211ENST00000466538 IGF2BP2Q9Y6M1 599 aaKnown RBP eCLIP5.34□□□□□ -1.55
CDC42BPA-211ENST00000466538 DUSP10Q9Y6W6 482 aa5.34□□□□□ -1.55
CDC42BPA-211ENST00000466538 POM121BA6NF01 834 aa5.33□□□□□ -1.56
CDC42BPA-211ENST00000466538 DRGXA6NNA5 263 aa5.33□□□□□ -1.56
CDC42BPA-211ENST00000466538 FGF18O76093 207 aa5.33□□□□□ -1.56
CDC42BPA-211ENST00000466538 PARP1P09874 1014 aaKnown RBP5.33□□□□□ -1.56
CDC42BPA-211ENST00000466538 BMP7P18075 431 aa5.33□□□□□ -1.56
CDC42BPA-211ENST00000466538 CNR2P34972 360 aa5.33□□□□□ -1.56
CDC42BPA-211ENST00000466538 TCF15Q12870 199 aa5.33□□□□□ -1.56
CDC42BPA-211ENST00000466538 FOXL1Q12952 345 aa5.33□□□□□ -1.56
CDC42BPA-211ENST00000466538 CHAF1AQ13111 956 aaPredicted RBP5.33□□□□□ -1.56
CDC42BPA-211ENST00000466538 SLC13A2Q13183 592 aa5.33□□□□□ -1.56
CDC42BPA-211ENST00000466538 RAB32Q13637 225 aa5.33□□□□□ -1.56
CDC42BPA-211ENST00000466538 ZRSR2Q15696 482 aaKnown RBP5.33□□□□□ -1.56
CDC42BPA-211ENST00000466538 TBC1D10BQ4KMP7 808 aaPredicted RBP5.33□□□□□ -1.56
CDC42BPA-211ENST00000466538 TCTN3Q6NUS6 607 aa5.33□□□□□ -1.56
CDC42BPA-211ENST00000466538 POLNQ7Z5Q5 900 aa5.33□□□□□ -1.56
CDC42BPA-211ENST00000466538 USP37Q86T82 979 aa5.33□□□□□ -1.56
CDC42BPA-211ENST00000466538 MYLK4Q86YV6 388 aaPredicted RBP5.33□□□□□ -1.56
CDC42BPA-211ENST00000466538 D2HGDHQ8N465 521 aa5.33□□□□□ -1.56
CDC42BPA-211ENST00000466538 CELF5Q8N6W0 485 aaKnown RBP5.33□□□□□ -1.56
CDC42BPA-211ENST00000466538 RNF152Q8N8N0 203 aa5.33□□□□□ -1.56
CDC42BPA-211ENST00000466538 ATP11CQ8NB49 1132 aa5.33□□□□□ -1.56
CDC42BPA-211ENST00000466538 SYT8Q8NBV8 401 aa5.33□□□□□ -1.56
CDC42BPA-211ENST00000466538 NUP133Q8WUM0 1156 aa5.33□□□□□ -1.56
CDC42BPA-211ENST00000466538 GNRHR2Q96P88 292 aa5.33□□□□□ -1.56
CDC42BPA-211ENST00000466538 KCNC2Q96PR1 638 aa5.33□□□□□ -1.56
CDC42BPA-211ENST00000466538 REXO4Q9GZR2 422 aaKnown RBP5.33□□□□□ -1.56
CDC42BPA-211ENST00000466538 SMURF2Q9HAU4 748 aa5.33□□□□□ -1.56
CDC42BPA-211ENST00000466538 A1CFQ9NQ94 594 aaKnown RBP5.33□□□□□ -1.56
CDC42BPA-211ENST00000466538 STK32BQ9NY57 414 aa5.33□□□□□ -1.56
CDC42BPA-211ENST00000466538 COL20A1Q9P218 1284 aa5.33□□□□□ -1.56
CDC42BPA-211ENST00000466538 ZFR2Q9UPR6 939 aaKnown RBP5.33□□□□□ -1.56
CDC42BPA-211ENST00000466538 AGFG2O95081 481 aa5.32□□□□□ -1.56
CDC42BPA-211ENST00000466538 ZSCAN22P10073 491 aaPredicted RBP5.32□□□□□ -1.56
CDC42BPA-211ENST00000466538 CKBP12277 381 aa5.32□□□□□ -1.56
CDC42BPA-211ENST00000466538 XRCC6P12956 609 aaKnown RBP eCLIP5.32□□□□□ -1.56
CDC42BPA-211ENST00000466538 MSX2P35548 267 aaPredicted RBP5.32□□□□□ -1.56
CDC42BPA-211ENST00000466538 CTBP1Q13363 440 aa5.32□□□□□ -1.56
CDC42BPA-211ENST00000466538 DHX8Q14562 1220 aaKnown RBP5.32□□□□□ -1.56
CDC42BPA-211ENST00000466538 GRAMD1BQ3KR37 738 aa5.32□□□□□ -1.56
CDC42BPA-211ENST00000466538 FAM83BQ5T0W9 1011 aa5.32□□□□□ -1.56
CDC42BPA-211ENST00000466538 NAIF1Q69YI7 327 aaPredicted RBP5.32□□□□□ -1.56
CDC42BPA-211ENST00000466538 XRRA1Q6P2D8 792 aa5.32□□□□□ -1.56
CDC42BPA-211ENST00000466538 GLB1LQ6UWU2 654 aa5.32□□□□□ -1.56
CDC42BPA-211ENST00000466538 BEND5Q7L4P6 421 aa5.32□□□□□ -1.56
CDC42BPA-211ENST00000466538 CIR1Q86X95 450 aaPredicted RBP5.32□□□□□ -1.56
CDC42BPA-211ENST00000466538 ELOA2Q8IYF1 753 aaPredicted RBP5.32□□□□□ -1.56
CDC42BPA-211ENST00000466538 TBC1D15Q8TC07 691 aa5.32□□□□□ -1.56
CDC42BPA-211ENST00000466538 ADAM7Q9H2U9 754 aa5.32□□□□□ -1.56
CDC42BPA-211ENST00000466538 SRRDQ9UH36 339 aa5.32□□□□□ -1.56
CDC42BPA-211ENST00000466538 LRCH1Q9Y2L9 728 aa5.32□□□□□ -1.56
CDC42BPA-211ENST00000466538 A0A087WWL8 130 aa5.31□□□□□ -1.56
CDC42BPA-211ENST00000466538 KLRG2A4D1S0 409 aaPredicted RBP5.31□□□□□ -1.56
CDC42BPA-211ENST00000466538 GOLGA6L6A8MZA4 724 aa5.31□□□□□ -1.56
CDC42BPA-211ENST00000466538 DIRC3C9JPN6 131 aa5.31□□□□□ -1.56
CDC42BPA-211ENST00000466538 MYO1CO00159 1063 aa5.31□□□□□ -1.56
CDC42BPA-211ENST00000466538 CYP2C9P11712 490 aa5.31□□□□□ -1.56
CDC42BPA-211ENST00000466538 TSHRP16473 764 aa5.31□□□□□ -1.56
CDC42BPA-211ENST00000466538 PHKA1P46020 1223 aa5.31□□□□□ -1.56
CDC42BPA-211ENST00000466538 PSMC1P62191 440 aaKnown RBP5.31□□□□□ -1.56
CDC42BPA-211ENST00000466538 STK3Q13188 491 aa5.31□□□□□ -1.56
CDC42BPA-211ENST00000466538 CSRP2Q16527 193 aa5.31□□□□□ -1.56
CDC42BPA-211ENST00000466538 UBXN11Q5T124 520 aa5.31□□□□□ -1.56
CDC42BPA-211ENST00000466538 HIBCHQ6NVY1 386 aaPredicted RBP5.31□□□□□ -1.56
CDC42BPA-211ENST00000466538 HTR3DQ70Z44 454 aa5.31□□□□□ -1.56
CDC42BPA-211ENST00000466538 MED25Q71SY5 747 aa5.31□□□□□ -1.56
CDC42BPA-211ENST00000466538 MICU3Q86XE3 530 aa5.31□□□□□ -1.56
CDC42BPA-211ENST00000466538 FUKQ8N0W3 1084 aa5.31□□□□□ -1.56
CDC42BPA-211ENST00000466538 FEZF2Q8TBJ5 459 aa5.31□□□□□ -1.56
CDC42BPA-211ENST00000466538 IPCEF1Q8WWN9 437 aaPredicted RBP5.31□□□□□ -1.56
CDC42BPA-211ENST00000466538 MOGAT1Q96PD6 335 aa5.31□□□□□ -1.56
CDC42BPA-211ENST00000466538 EIF2AQ9BY44 585 aaKnown RBP5.31□□□□□ -1.56
CDC42BPA-211ENST00000466538 CPEB1Q9BZB8 566 aaKnown RBP5.31□□□□□ -1.56
CDC42BPA-211ENST00000466538 WDR12Q9GZL7 423 aaKnown RBP5.31□□□□□ -1.56
CDC42BPA-211ENST00000466538 XYLT2Q9H1B5 865 aa5.31□□□□□ -1.56
CDC42BPA-211ENST00000466538 CERS4Q9HA82 394 aa5.31□□□□□ -1.56
CDC42BPA-211ENST00000466538 SLC45A2Q9UMX9 530 aa5.31□□□□□ -1.56
CDC42BPA-211ENST00000466538 A0A1W2PPC4 97 aa5.3□□□□□ -1.56
CDC42BPA-211ENST00000466538 CDHR4A6H8M9 788 aa5.3□□□□□ -1.56
CDC42BPA-211ENST00000466538 MBD3L4A6NDZ8 208 aaPredicted RBP5.3□□□□□ -1.56
CDC42BPA-211ENST00000466538 MBD3L3A6NE82 208 aaPredicted RBP5.3□□□□□ -1.56
CDC42BPA-211ENST00000466538 ZNF785A8K8V0 405 aa5.3□□□□□ -1.56
CDC42BPA-211ENST00000466538 F5H423 210 aaPredicted RBP5.3□□□□□ -1.56
CDC42BPA-211ENST00000466538 F8W8V4 182 aa5.3□□□□□ -1.56
CDC42BPA-211ENST00000466538 APOL1O14791 398 aa5.3□□□□□ -1.56
CDC42BPA-211ENST00000466538 AREL1O15033 823 aa5.3□□□□□ -1.56
CDC42BPA-211ENST00000466538 CYP27B1O15528 508 aa5.3□□□□□ -1.56
CDC42BPA-211ENST00000466538 FOXS1O43638 330 aa5.3□□□□□ -1.56
CDC42BPA-211ENST00000466538 TCEA3O75764 348 aa5.3□□□□□ -1.56
CDC42BPA-211ENST00000466538 DNAJB5O75953 348 aa5.3□□□□□ -1.56
CDC42BPA-211ENST00000466538 ANXA2P07355 339 aaKnown RBP5.3□□□□□ -1.56
CDC42BPA-211ENST00000466538 GCSHP23434 173 aa5.3□□□□□ -1.56
CDC42BPA-211ENST00000466538 SLC11A2P49281 568 aa5.3□□□□□ -1.56
CDC42BPA-211ENST00000466538 ZNF135P52742 658 aaPredicted RBP5.3□□□□□ -1.56
Retrieved 100 of 20,778 RNA–protein pairs in 26.6 ms