RNA–Protein interactions for RNA: ENST00000466351.1

CDHR3-204, Transcript of cadherin related family member 3, humanhuman

TSL 3

Gene CDHR3, Length 362 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDHR3-204ENST00000466351 DRG1Q9Y295 367 aaKnown RBP7.29□□□□□ -1.24
CDHR3-204ENST00000466351 NEU2Q9Y3R4 380 aa7.29□□□□□ -1.24
CDHR3-204ENST00000466351 NR2E1Q9Y466 385 aa7.29□□□□□ -1.24
CDHR3-204ENST00000466351 CEP83Q9Y592 693 aa7.29□□□□□ -1.24
CDHR3-204ENST00000466351 CD2APQ9Y5K6 639 aa7.29□□□□□ -1.24
CDHR3-204ENST00000466351 MGAMO43451 1857 aa7.29□□□□□ -1.24
CDHR3-204ENST00000466351 PDCD11Q14690 1871 aaKnown RBP7.29□□□□□ -1.24
CDHR3-204ENST00000466351 ZNF236Q9UL36 1845 aa7.29□□□□□ -1.24
CDHR3-204ENST00000466351 CNTNAP2Q9UHC6 1331 aa7.28□□□□□ -1.24
CDHR3-204ENST00000466351 IGKV6-21A0A0C4DH24 114 aa7.28□□□□□ -1.24
CDHR3-204ENST00000466351 A0A1B0GUA9 196 aa7.28□□□□□ -1.24
CDHR3-204ENST00000466351 TCRBV5S1A1TA0A578 114 aa7.28□□□□□ -1.24
CDHR3-204ENST00000466351 NFKBIEO00221 500 aa7.28□□□□□ -1.24
CDHR3-204ENST00000466351 OGTO15294 1046 aa7.28□□□□□ -1.24
CDHR3-204ENST00000466351 B4GALT4O60513 344 aa7.28□□□□□ -1.24
CDHR3-204ENST00000466351 MAFO75444 373 aaPredicted RBP7.28□□□□□ -1.24
CDHR3-204ENST00000466351 LGR5O75473 907 aa7.28□□□□□ -1.24
CDHR3-204ENST00000466351 DNAJC8O75937 253 aaPredicted RBP7.28□□□□□ -1.24
CDHR3-204ENST00000466351 TJP3O95049 919 aa7.28□□□□□ -1.24
CDHR3-204ENST00000466351 IL18RAPO95256 599 aa7.28□□□□□ -1.24
CDHR3-204ENST00000466351 SLC25A27O95847 323 aa7.28□□□□□ -1.24
CDHR3-204ENST00000466351 KRT5P13647 590 aa7.28□□□□□ -1.24
CDHR3-204ENST00000466351 DRD4P21917 467 aa7.28□□□□□ -1.24
CDHR3-204ENST00000466351 GLRA2P23416 452 aa7.28□□□□□ -1.24
CDHR3-204ENST00000466351 GNA15P30679 374 aa7.28□□□□□ -1.24
CDHR3-204ENST00000466351 POLR2BP30876 1174 aaKnown RBP7.28□□□□□ -1.24
CDHR3-204ENST00000466351 HPDP32754 393 aaPredicted RBP7.28□□□□□ -1.24
CDHR3-204ENST00000466351 TIE1P35590 1138 aa7.28□□□□□ -1.24
CDHR3-204ENST00000466351 MARCKSL1P49006 195 aa7.28□□□□□ -1.24
CDHR3-204ENST00000466351 ALDH5A1P51649 535 aaPredicted RBP7.28□□□□□ -1.24
CDHR3-204ENST00000466351 MRPS25P82663 173 aaKnown RBP7.28□□□□□ -1.24
CDHR3-204ENST00000466351 ACTN3Q08043 901 aaPredicted RBP7.28□□□□□ -1.24
CDHR3-204ENST00000466351 ZNF211Q13398 564 aaPredicted RBP7.28□□□□□ -1.24
CDHR3-204ENST00000466351 MAMLD1Q13495 774 aa7.28□□□□□ -1.24
CDHR3-204ENST00000466351 SLC29A2Q14542 456 aa7.28□□□□□ -1.24
CDHR3-204ENST00000466351 TMEM132BQ14DG7 1078 aa7.28□□□□□ -1.24
CDHR3-204ENST00000466351 SPDYAQ5MJ70 313 aa7.28□□□□□ -1.24
CDHR3-204ENST00000466351 SWT1Q5T5J6 900 aaKnown RBP7.28□□□□□ -1.24
CDHR3-204ENST00000466351 LHX8Q68G74 356 aa7.28□□□□□ -1.24
CDHR3-204ENST00000466351 SWSAP1Q6NVH7 229 aa7.28□□□□□ -1.24
CDHR3-204ENST00000466351 PPP1R21Q6ZMI0 780 aa7.28□□□□□ -1.24
CDHR3-204ENST00000466351 RGS9BPQ6ZS82 235 aa7.28□□□□□ -1.24
CDHR3-204ENST00000466351 PPP1R3FQ6ZSY5 799 aaPredicted RBP7.28□□□□□ -1.24
CDHR3-204ENST00000466351 PLPPR4Q7Z2D5 763 aa7.28□□□□□ -1.24
CDHR3-204ENST00000466351 PCGF5Q86SE9 256 aa7.28□□□□□ -1.24
CDHR3-204ENST00000466351 CCDC125Q86Z20 511 aa7.28□□□□□ -1.24
CDHR3-204ENST00000466351 ZBTB8OSQ8IWT0 167 aa7.28□□□□□ -1.24
CDHR3-204ENST00000466351 ZCCHC9Q8N567 271 aaKnown RBP7.28□□□□□ -1.24
CDHR3-204ENST00000466351 TMEM35BQ8NCS4 154 aa7.28□□□□□ -1.24
CDHR3-204ENST00000466351 DDX55Q8NHQ9 600 aaKnown RBP eCLIP7.28□□□□□ -1.24
CDHR3-204ENST00000466351 GTF3C2Q8WUA4 911 aaPredicted RBP7.28□□□□□ -1.24
CDHR3-204ENST00000466351 AFG1LQ8WV93 481 aa7.28□□□□□ -1.24
CDHR3-204ENST00000466351 RNF25Q96BH1 459 aaPredicted RBP7.28□□□□□ -1.24
CDHR3-204ENST00000466351 CCDC127Q96BQ5 260 aa7.28□□□□□ -1.24
CDHR3-204ENST00000466351 SGSM3Q96HU1 749 aa7.28□□□□□ -1.24
CDHR3-204ENST00000466351 WRNIP1Q96S55 665 aa7.28□□□□□ -1.24
CDHR3-204ENST00000466351 NCAPGQ9BPX3 1015 aa7.28□□□□□ -1.24
CDHR3-204ENST00000466351 FAM213AQ9BRX8 229 aa7.28□□□□□ -1.24
CDHR3-204ENST00000466351 NIF3L1Q9GZT8 377 aa7.28□□□□□ -1.24
CDHR3-204ENST00000466351 CCDC113Q9H0I3 377 aa7.28□□□□□ -1.24
CDHR3-204ENST00000466351 LHX5Q9H2C1 402 aa7.28□□□□□ -1.24
CDHR3-204ENST00000466351 VRTNQ9H8Y1 702 aa7.28□□□□□ -1.24
CDHR3-204ENST00000466351 SSU72Q9NP77 194 aaKnown RBP7.28□□□□□ -1.24
CDHR3-204ENST00000466351 SAMD15Q9P1V8 674 aa7.28□□□□□ -1.24
CDHR3-204ENST00000466351 SNX24Q9Y343 169 aa7.28□□□□□ -1.24
CDHR3-204ENST00000466351 AFG3L2Q9Y4W6 797 aa7.28□□□□□ -1.24
CDHR3-204ENST00000466351 SCN4AP35499 1836 aa7.28□□□□□ -1.24
CDHR3-204ENST00000466351 GOLGA8IPA6NC78 632 aa7.27□□□□□ -1.25
CDHR3-204ENST00000466351 CFAP73A6NFT4 308 aa7.27□□□□□ -1.25
CDHR3-204ENST00000466351 GOLGA8JA6NMD2 632 aa7.27□□□□□ -1.25
CDHR3-204ENST00000466351 ZNF487B1APH4 448 aa7.27□□□□□ -1.25
CDHR3-204ENST00000466351 TRIM66O15016 1216 aa7.27□□□□□ -1.25
CDHR3-204ENST00000466351 TP73O15350 636 aa7.27□□□□□ -1.25
CDHR3-204ENST00000466351 MED7O43513 233 aa7.27□□□□□ -1.25
CDHR3-204ENST00000466351 FAM189A1O60320 539 aa7.27□□□□□ -1.25
CDHR3-204ENST00000466351 CAND2O75155 1236 aa7.27□□□□□ -1.25
CDHR3-204ENST00000466351 ZNF189O75820 626 aaPredicted RBP7.27□□□□□ -1.25
CDHR3-204ENST00000466351 TOMM70O94826 608 aa7.27□□□□□ -1.25
CDHR3-204ENST00000466351 FARP2O94887 1054 aaPredicted RBP7.27□□□□□ -1.25
CDHR3-204ENST00000466351 VNN1O95497 513 aa7.27□□□□□ -1.25
CDHR3-204ENST00000466351 STAU1O95793 577 aaKnown RBP7.27□□□□□ -1.25
CDHR3-204ENST00000466351 ITGAVP06756 1048 aa7.27□□□□□ -1.25
CDHR3-204ENST00000466351 DLATP10515 647 aaKnown RBP7.27□□□□□ -1.25
CDHR3-204ENST00000466351 TNNI1P19237 187 aa7.27□□□□□ -1.25
CDHR3-204ENST00000466351 PROZP22891 400 aa7.27□□□□□ -1.25
CDHR3-204ENST00000466351 RRM1P23921 792 aa7.27□□□□□ -1.25
CDHR3-204ENST00000466351 SKIV2L2P42285 1042 aaKnown RBP7.27□□□□□ -1.25
CDHR3-204ENST00000466351 GMPSP49915 693 aaPredicted RBP7.27□□□□□ -1.25
CDHR3-204ENST00000466351 XRCC4Q13426 336 aa7.27□□□□□ -1.25
CDHR3-204ENST00000466351 NCOA4Q13772 614 aa7.27□□□□□ -1.25
CDHR3-204ENST00000466351 AUHQ13825 339 aaKnown RBP7.27□□□□□ -1.25
CDHR3-204ENST00000466351 TFDP1Q14186 410 aa7.27□□□□□ -1.25
CDHR3-204ENST00000466351 MORF4L2Q15014 288 aa7.27□□□□□ -1.25
CDHR3-204ENST00000466351 FAM187BQ17R55 369 aa7.27□□□□□ -1.25
CDHR3-204ENST00000466351 SGSM1Q2NKQ1 1148 aa7.27□□□□□ -1.25
CDHR3-204ENST00000466351 WDR78Q5VTH9 848 aa7.27□□□□□ -1.25
CDHR3-204ENST00000466351 CRELD2Q6UXH1 353 aaPredicted RBP7.27□□□□□ -1.25
CDHR3-204ENST00000466351 ZNF365Q70YC5 407 aa7.27□□□□□ -1.25
CDHR3-204ENST00000466351 MAEAQ7L5Y9 396 aa7.27□□□□□ -1.25
CDHR3-204ENST00000466351 ANKS1BQ7Z6G8 1248 aa7.27□□□□□ -1.25
Retrieved 100 of 20,778 RNA–protein pairs in 32 ms