RNA–Protein interactions for RNA: ENST00000465591.1

LIME1-203, Transcript of Lck interacting transmembrane adaptor 1, humanhuman

TSL 2

Gene LIME1, Length 680 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LIME1-203ENST00000465591 FAM213AQ9BRX8 229 aa23.61■■□□□ 1.37
LIME1-203ENST00000465591 C2CD2Q9Y426 696 aa23.61■■□□□ 1.37
LIME1-203ENST00000465591 ARIH1Q9Y4X5 557 aaPredicted RBP23.61■■□□□ 1.37
LIME1-203ENST00000465591 GTF3C5Q9Y5Q8 519 aaPredicted RBP23.61■■□□□ 1.37
LIME1-203ENST00000465591 ARHGEF37A1IGU5 675 aa23.6■■□□□ 1.37
LIME1-203ENST00000465591 GOLGA8IPA6NC78 632 aa23.6■■□□□ 1.37
LIME1-203ENST00000465591 GOLGA8JA6NMD2 632 aa23.6■■□□□ 1.37
LIME1-203ENST00000465591 XYLBO75191 536 aa23.6■■□□□ 1.37
LIME1-203ENST00000465591 OAZ2O95190 189 aa23.6■■□□□ 1.37
LIME1-203ENST00000465591 ASIC1P78348 528 aa23.6■■□□□ 1.37
LIME1-203ENST00000465591 ALCAMQ13740 583 aa23.6■■□□□ 1.37
LIME1-203ENST00000465591 IER5LQ5T953 404 aa23.6■■□□□ 1.37
LIME1-203ENST00000465591 CNNM4Q6P4Q7 775 aa23.6■■□□□ 1.37
LIME1-203ENST00000465591 DSTYKQ6XUX3 929 aa23.6■■□□□ 1.37
LIME1-203ENST00000465591 SYCP3Q8IZU3 236 aa23.6■■□□□ 1.37
LIME1-203ENST00000465591 FAM120AQ9NZB2 1118 aaKnown RBP eCLIP23.6■■□□□ 1.372e-14■■□□□ 12.7
LIME1-203ENST00000465591 IGSF9Q9P2J2 1179 aa23.6■■□□□ 1.37
LIME1-203ENST00000465591 VNN2O95498 520 aa23.59■■□□□ 1.37
LIME1-203ENST00000465591 OR4Q2P0C623 313 aa23.59■■□□□ 1.37
LIME1-203ENST00000465591 GARTP22102 1010 aa23.59■■□□□ 1.37
LIME1-203ENST00000465591 PLA2G5P39877 138 aa23.59■■□□□ 1.37
LIME1-203ENST00000465591 POU5F1Q01860 360 aaKnown RBP23.59■■□□□ 1.37
LIME1-203ENST00000465591 YWHAHQ04917 246 aaPredicted RBP23.59■■□□□ 1.37
LIME1-203ENST00000465591 SCARA3Q6AZY7 606 aa23.59■■□□□ 1.37
LIME1-203ENST00000465591 RNF19BQ6ZMZ0 732 aa23.59■■□□□ 1.37
LIME1-203ENST00000465591 RTL10Q7L3V2 364 aa23.59■■□□□ 1.37
LIME1-203ENST00000465591 TCEAL8Q8IYN2 117 aa23.59■■□□□ 1.37
LIME1-203ENST00000465591 SENP8Q96LD8 212 aa23.59■■□□□ 1.37
LIME1-203ENST00000465591 C7orf25Q9BPX7 421 aa23.59■■□□□ 1.37
LIME1-203ENST00000465591 BLZF1Q9H2G9 400 aa23.59■■□□□ 1.37
LIME1-203ENST00000465591 PCIF1Q9H4Z3 704 aa23.59■■□□□ 1.37
LIME1-203ENST00000465591 CYP4F11Q9HBI6 524 aa23.59■■□□□ 1.37
LIME1-203ENST00000465591 DPP3Q9NY33 737 aa23.59■■□□□ 1.37
LIME1-203ENST00000465591 CFAP45Q9UL16 551 aa23.59■■□□□ 1.37
LIME1-203ENST00000465591 DUSP12Q9UNI6 340 aa23.59■■□□□ 1.37
LIME1-203ENST00000465591 PRRG1O14668 218 aa23.58■■□□□ 1.37
LIME1-203ENST00000465591 ADCY1Q08828 1119 aa23.58■■□□□ 1.37
LIME1-203ENST00000465591 HTR4Q13639 388 aa23.58■■□□□ 1.37
LIME1-203ENST00000465591 TPGS2Q68CL5 300 aa23.58■■□□□ 1.37
LIME1-203ENST00000465591 POTEHQ6S545 545 aa23.58■■□□□ 1.37
LIME1-203ENST00000465591 BRSK2Q8IWQ3 736 aa23.58■■□□□ 1.37
LIME1-203ENST00000465591 SUGP1Q8IWZ8 645 aaKnown RBP23.58■■□□□ 1.37
LIME1-203ENST00000465591 FGF13Q92913 245 aa23.58■■□□□ 1.37
LIME1-203ENST00000465591 RPP25Q9BUL9 199 aaKnown RBP23.58■■□□□ 1.37
LIME1-203ENST00000465591 LRRC27Q9C0I9 530 aa23.58■■□□□ 1.37
LIME1-203ENST00000465591 AFF4Q9UHB7 1163 aaKnown RBP23.58■■□□□ 1.37
LIME1-203ENST00000465591 CDH7Q9ULB5 785 aa23.58■■□□□ 1.37
LIME1-203ENST00000465591 INSL5Q9Y5Q6 135 aa23.58■■□□□ 1.37
LIME1-203ENST00000465591 ZFP91-CNTFA0A0A6YYC7 529 aaPredicted RBP23.57■■□□□ 1.36
LIME1-203ENST00000465591 ANHXE9PGG2 379 aa23.57■■□□□ 1.36
LIME1-203ENST00000465591 NRG2O14511 850 aaPredicted RBP23.57■■□□□ 1.36
LIME1-203ENST00000465591 IL18RAPO95256 599 aa23.57■■□□□ 1.36
LIME1-203ENST00000465591 CPB1P15086 417 aa23.57■■□□□ 1.36
LIME1-203ENST00000465591 TYMPP19971 482 aa23.57■■□□□ 1.36
LIME1-203ENST00000465591 ELF1P32519 619 aa23.57■■□□□ 1.36
LIME1-203ENST00000465591 AMPD3Q01432 767 aa23.57■■□□□ 1.36
LIME1-203ENST00000465591 EHHADHQ08426 723 aa23.57■■□□□ 1.36
LIME1-203ENST00000465591 SLC5A9Q2M3M2 681 aa23.57■■□□□ 1.36
LIME1-203ENST00000465591 PABPC1LQ4VXU2 614 aaKnown RBP23.57■■□□□ 1.36
LIME1-203ENST00000465591 EPM2AIP1Q7L775 607 aaPredicted RBP23.57■■□□□ 1.36
LIME1-203ENST00000465591 GRAMD1CQ8IYS0 662 aa23.57■■□□□ 1.36
LIME1-203ENST00000465591 SLC44A3Q8N4M1 653 aa23.57■■□□□ 1.36
LIME1-203ENST00000465591 TMEM209Q96SK2 561 aa23.57■■□□□ 1.36
LIME1-203ENST00000465591 CRISPLD1Q9H336 500 aa23.57■■□□□ 1.36
LIME1-203ENST00000465591 TMEM206Q9H813 350 aa23.57■■□□□ 1.36
LIME1-203ENST00000465591 FAM13BQ9NYF5 915 aa23.57■■□□□ 1.36
LIME1-203ENST00000465591 CACNA1HO95180 2353 aa23.56■■□□□ 1.36
LIME1-203ENST00000465591 RHOP08100 348 aa23.56■■□□□ 1.36
LIME1-203ENST00000465591 AFMP43652 599 aa23.56■■□□□ 1.36
LIME1-203ENST00000465591 FAM26FQ5R3K3 315 aa23.56■■□□□ 1.36
LIME1-203ENST00000465591 OVOS1Q6IE37 1185 aa23.56■■□□□ 1.36
LIME1-203ENST00000465591 USP37Q86T82 979 aa23.56■■□□□ 1.36
LIME1-203ENST00000465591 LEO1Q8WVC0 666 aaPredicted RBP23.56■■□□□ 1.36
LIME1-203ENST00000465591 ING5Q8WYH8 240 aa23.56■■□□□ 1.36
LIME1-203ENST00000465591 FGF14Q92915 247 aa23.56■■□□□ 1.36
LIME1-203ENST00000465591 FAM122AQ96E09 287 aa23.56■■□□□ 1.36
LIME1-203ENST00000465591 BORCS6Q96GS4 357 aa23.56■■□□□ 1.36
LIME1-203ENST00000465591 PGLYRP2Q96PD5 576 aa23.56■■□□□ 1.36
LIME1-203ENST00000465591 RBAKQ9NYW8 714 aaPredicted RBP23.56■■□□□ 1.36
LIME1-203ENST00000465591 KCNH3Q9ULD8 1083 aa23.56■■□□□ 1.36
LIME1-203ENST00000465591 NUMBLQ9Y6R0 609 aa23.56■■□□□ 1.36
LIME1-203ENST00000465591 EXTL3O43909 919 aa23.55■■□□□ 1.36
LIME1-203ENST00000465591 LRG1P02750 347 aa23.55■■□□□ 1.36
LIME1-203ENST00000465591 CUL4BQ13620 913 aa23.55■■□□□ 1.36
LIME1-203ENST00000465591 ARMCX5Q6P1M9 558 aa23.55■■□□□ 1.36
LIME1-203ENST00000465591 PARM1Q6UWI2 310 aa23.55■■□□□ 1.36
LIME1-203ENST00000465591 UNC13DQ70J99 1090 aa23.55■■□□□ 1.36
LIME1-203ENST00000465591 NPAS3Q8IXF0 933 aa23.55■■□□□ 1.36
LIME1-203ENST00000465591 PRSS33Q8NF86 280 aa23.55■■□□□ 1.36
LIME1-203ENST00000465591 NOC3LQ8WTT2 800 aaKnown RBP23.55■■□□□ 1.36
LIME1-203ENST00000465591 MAGEF1Q9HAY2 307 aa23.55■■□□□ 1.36
LIME1-203ENST00000465591 SERTAD1Q9UHV2 236 aa23.55■■□□□ 1.36
LIME1-203ENST00000465591 TULP1O00294 542 aaPredicted RBP23.54■■□□□ 1.36
LIME1-203ENST00000465591 ACTN4O43707 911 aaKnown RBP23.54■■□□□ 1.36
LIME1-203ENST00000465591 LDHAP00338 332 aaKnown RBP23.54■■□□□ 1.36
LIME1-203ENST00000465591 ODC1P11926 461 aa23.54■■□□□ 1.36
LIME1-203ENST00000465591 AVPR2P30518 371 aa23.54■■□□□ 1.36
LIME1-203ENST00000465591 TFAMQ00059 246 aaKnown RBP23.54■■□□□ 1.36
LIME1-203ENST00000465591 C1orf127Q8N9H9 656 aa23.54■■□□□ 1.36
LIME1-203ENST00000465591 OR10T2Q8NGX3 314 aa23.54■■□□□ 1.36
Retrieved 100 of 20,778 RNA–protein pairs in 28 ms