RNA–Protein interactions for RNA: ENST00000464541.5

PTCD3-205, Transcript of pentatricopeptide repeat domain 3, humanhuman

TSL 5

Gene PTCD3, Length 890 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTCD3-205ENST00000464541 GFOD2Q3B7J2 385 aa7.57□□□□□ -1.2
PTCD3-205ENST00000464541 LCE5AQ5TCM9 118 aa7.57□□□□□ -1.2
PTCD3-205ENST00000464541 DDX17Q92841 729 aaKnown RBP7.57□□□□□ -1.2
PTCD3-205ENST00000464541 FUBP1Q96AE4 644 aaKnown RBP7.57□□□□□ -1.2
PTCD3-205ENST00000464541 SLC35A4Q96G79 324 aa7.57□□□□□ -1.2
PTCD3-205ENST00000464541 KLHL32Q96NJ5 620 aa7.57□□□□□ -1.2
PTCD3-205ENST00000464541 MMRN2Q9H8L6 949 aa7.57□□□□□ -1.2
PTCD3-205ENST00000464541 GPR35Q9HC97 309 aa7.57□□□□□ -1.2
PTCD3-205ENST00000464541 GABBR1Q9UBS5 961 aa7.57□□□□□ -1.2
PTCD3-205ENST00000464541 MYADML2A6NDP7 307 aa7.56□□□□□ -1.2
PTCD3-205ENST00000464541 PRPF3O43395 683 aaKnown RBP7.56□□□□□ -1.2
PTCD3-205ENST00000464541 B3GALT2O43825 422 aa7.56□□□□□ -1.2
PTCD3-205ENST00000464541 CDKL5O76039 1030 aa7.56□□□□□ -1.2
PTCD3-205ENST00000464541 RARBP10826 455 aa7.56□□□□□ -1.2
PTCD3-205ENST00000464541 GDF5P43026 501 aa7.56□□□□□ -1.2
PTCD3-205ENST00000464541 POU6F2P78424 691 aaPredicted RBP7.56□□□□□ -1.2
PTCD3-205ENST00000464541 GUCY1B3Q02153 619 aa7.56□□□□□ -1.2
PTCD3-205ENST00000464541 ZNF844Q08AG5 666 aa7.56□□□□□ -1.2
PTCD3-205ENST00000464541 B3GNTL1Q67FW5 361 aaPredicted RBP7.56□□□□□ -1.2
PTCD3-205ENST00000464541 KCNV1Q6PIU1 500 aa7.56□□□□□ -1.2
PTCD3-205ENST00000464541 DAAM2Q86T65 1068 aa7.56□□□□□ -1.2
PTCD3-205ENST00000464541 AMER2Q8N7J2 671 aa7.56□□□□□ -1.2
PTCD3-205ENST00000464541 PROKR1Q8TCW9 393 aa7.56□□□□□ -1.2
PTCD3-205ENST00000464541 ZSWIM1Q9BR11 485 aa7.56□□□□□ -1.2
PTCD3-205ENST00000464541 KRTAP4-9Q9BYQ8 210 aa7.56□□□□□ -1.2
PTCD3-205ENST00000464541 TMEM60Q9H2L4 133 aa7.56□□□□□ -1.2
PTCD3-205ENST00000464541 CENPVL1A0A0U1RR11 272 aa7.55□□□□□ -1.2
PTCD3-205ENST00000464541 CYR61O00622 381 aa7.55□□□□□ -1.2
PTCD3-205ENST00000464541 TUSC2O75896 110 aa7.55□□□□□ -1.2
PTCD3-205ENST00000464541 MATN4O95460 622 aa7.55□□□□□ -1.2
PTCD3-205ENST00000464541 FOSP01100 380 aaPredicted RBP7.55□□□□□ -1.2
PTCD3-205ENST00000464541 ACVRL1P37023 503 aa7.55□□□□□ -1.2
PTCD3-205ENST00000464541 AGFG1P52594 562 aaKnown RBP7.55□□□□□ -1.2
PTCD3-205ENST00000464541 CXADRP78310 365 aa7.55□□□□□ -1.2
PTCD3-205ENST00000464541 BLOC1S1P78537 153 aa7.55□□□□□ -1.2
PTCD3-205ENST00000464541 HSD11B2P80365 405 aa7.55□□□□□ -1.2
PTCD3-205ENST00000464541 TAP1Q03518 808 aa7.55□□□□□ -1.2
PTCD3-205ENST00000464541 RESTQ13127 1097 aa7.55□□□□□ -1.2
PTCD3-205ENST00000464541 FGL2Q14314 439 aa7.55□□□□□ -1.2
PTCD3-205ENST00000464541 PTPAQ15257 358 aa7.55□□□□□ -1.2
PTCD3-205ENST00000464541 ANO6Q4KMQ2 910 aa7.55□□□□□ -1.2
PTCD3-205ENST00000464541 FMNL3Q8IVF7 1028 aa7.55□□□□□ -1.2
PTCD3-205ENST00000464541 ZBTB34Q8NCN2 500 aa7.55□□□□□ -1.2
PTCD3-205ENST00000464541 GALNT9Q9HCQ5 603 aa7.55□□□□□ -1.2
PTCD3-205ENST00000464541 SARS2Q9NP81 518 aaKnown RBP7.55□□□□□ -1.2
PTCD3-205ENST00000464541 HSFX1Q9UBD0 423 aa7.55□□□□□ -1.2
PTCD3-205ENST00000464541 MTO1Q9Y2Z2 717 aaKnown RBP7.55□□□□□ -1.2
PTCD3-205ENST00000464541 FAM227AF5H4B4 570 aa7.54□□□□□ -1.2
PTCD3-205ENST00000464541 GNAI2P04899 355 aa7.54□□□□□ -1.2
PTCD3-205ENST00000464541 RAB1AP62820 205 aa7.54□□□□□ -1.2
PTCD3-205ENST00000464541 GPSM2P81274 684 aa7.54□□□□□ -1.2
PTCD3-205ENST00000464541 TCF15Q12870 199 aa7.54□□□□□ -1.2
PTCD3-205ENST00000464541 IGFL4Q6B9Z1 124 aa7.54□□□□□ -1.2
PTCD3-205ENST00000464541 PPP1R3BQ86XI6 285 aa7.54□□□□□ -1.2
PTCD3-205ENST00000464541 TMIEQ8NEW7 156 aa7.54□□□□□ -1.2
PTCD3-205ENST00000464541 TNPO1Q92973 898 aaKnown RBP7.54□□□□□ -1.2
PTCD3-205ENST00000464541 TSR2Q969E8 191 aaKnown RBP7.54□□□□□ -1.2
PTCD3-205ENST00000464541 PRRX2Q99811 253 aa7.54□□□□□ -1.2
PTCD3-205ENST00000464541 ADAM2Q99965 735 aa7.54□□□□□ -1.2
PTCD3-205ENST00000464541 LRFN3Q9BTN0 628 aa7.54□□□□□ -1.2
PTCD3-205ENST00000464541 C1orf43Q9BWL3 253 aa7.54□□□□□ -1.2
PTCD3-205ENST00000464541 ALOXE3Q9BYJ1 711 aa7.54□□□□□ -1.2
PTCD3-205ENST00000464541 IMPG2Q9BZV3 1241 aa7.54□□□□□ -1.2
PTCD3-205ENST00000464541 FAM204AQ9H8W3 233 aa7.54□□□□□ -1.2
PTCD3-205ENST00000464541 CNNM1Q9NRU3 951 aa7.54□□□□□ -1.2
PTCD3-205ENST00000464541 USP25Q9UHP3 1055 aa7.54□□□□□ -1.2
PTCD3-205ENST00000464541 SLC45A2Q9UMX9 530 aa7.54□□□□□ -1.2
PTCD3-205ENST00000464541 A0A1W2PS29 197 aa7.53□□□□□ -1.2
PTCD3-205ENST00000464541 PRSS29PA6NIE9 313 aa7.53□□□□□ -1.2
PTCD3-205ENST00000464541 E7ENX8 843 aa7.53□□□□□ -1.2
PTCD3-205ENST00000464541 ERN1O75460 977 aaKnown RBP7.53□□□□□ -1.2
PTCD3-205ENST00000464541 HMGB1P09429 215 aaKnown RBP7.53□□□□□ -1.2
PTCD3-205ENST00000464541 KCNA2P16389 499 aa7.53□□□□□ -1.2
PTCD3-205ENST00000464541 TAP2Q03519 686 aa7.53□□□□□ -1.2
PTCD3-205ENST00000464541 CYP2A13Q16696 494 aa7.53□□□□□ -1.2
PTCD3-205ENST00000464541 ARHGAP29Q52LW3 1261 aa7.53□□□□□ -1.2
PTCD3-205ENST00000464541 OVCH2Q7RTZ1 564 aa7.53□□□□□ -1.2
PTCD3-205ENST00000464541 COLGALT2Q8IYK4 626 aa7.53□□□□□ -1.2
PTCD3-205ENST00000464541 ULK2Q8IYT8 1036 aa7.53□□□□□ -1.2
PTCD3-205ENST00000464541 CFAP52Q8N1V2 620 aa7.53□□□□□ -1.2
PTCD3-205ENST00000464541 SH2D3CQ8N5H7 860 aa7.53□□□□□ -1.2
PTCD3-205ENST00000464541 PDPRQ8NCN5 879 aa7.53□□□□□ -1.2
PTCD3-205ENST00000464541 SLC17A8Q8NDX2 589 aa7.53□□□□□ -1.2
PTCD3-205ENST00000464541 TTC8Q8TAM2 541 aa7.53□□□□□ -1.2
PTCD3-205ENST00000464541 PPP1R35Q8TAP8 253 aa7.53□□□□□ -1.2
PTCD3-205ENST00000464541 CNPPD1Q9BV87 410 aa7.53□□□□□ -1.2
PTCD3-205ENST00000464541 TLR10Q9BXR5 811 aa7.53□□□□□ -1.2
PTCD3-205ENST00000464541 PRDM11Q9NQV5 511 aa7.53□□□□□ -1.2
PTCD3-205ENST00000464541 ST6GALNAC1Q9NSC7 600 aaPredicted RBP7.53□□□□□ -1.2
PTCD3-205ENST00000464541 CDYLQ9Y232 598 aa7.53□□□□□ -1.2
PTCD3-205ENST00000464541 MAP3K2Q9Y2U5 619 aa7.53□□□□□ -1.2
PTCD3-205ENST00000464541 PCDHA1Q9Y5I3 950 aa7.53□□□□□ -1.2
PTCD3-205ENST00000464541 AATKQ6ZMQ8 1374 aa7.53□□□□□ -1.2
PTCD3-205ENST00000464541 CCDC195A0A1B0GUA6 201 aa7.52□□□□□ -1.21
PTCD3-205ENST00000464541 CCDC78A2IDD5 438 aa7.52□□□□□ -1.21
PTCD3-205ENST00000464541 ZNF785A8K8V0 405 aa7.52□□□□□ -1.21
PTCD3-205ENST00000464541 PARNO95453 639 aaKnown RBP7.52□□□□□ -1.21
PTCD3-205ENST00000464541 GBX1Q14549 363 aa7.52□□□□□ -1.21
PTCD3-205ENST00000464541 ABHD17BQ5VST6 288 aa7.52□□□□□ -1.21
PTCD3-205ENST00000464541 SRGAP1Q7Z6B7 1085 aa7.52□□□□□ -1.21
Retrieved 100 of 20,778 RNA–protein pairs in 33.5 ms