RNA–Protein interactions for RNA: ENST00000462352.5

CPNE1-221, Transcript of copine 1, humanhuman

TSL 2

Gene CPNE1, Length 625 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPNE1-221ENST00000462352 PAX3P23760 479 aa12.7□□□□□ -0.38
CPNE1-221ENST00000462352 GLUD2P49448 558 aa12.7□□□□□ -0.38
CPNE1-221ENST00000462352 ZNF165P49910 485 aa12.7□□□□□ -0.38
CPNE1-221ENST00000462352 MXI1P50539 228 aa12.7□□□□□ -0.38
CPNE1-221ENST00000462352 TRPC3Q13507 836 aa12.7□□□□□ -0.38
CPNE1-221ENST00000462352 NCOA4Q13772 614 aa12.7□□□□□ -0.38
CPNE1-221ENST00000462352 NCAPHQ15003 741 aa12.7□□□□□ -0.38
CPNE1-221ENST00000462352 SV2CQ496J9 727 aa12.7□□□□□ -0.38
CPNE1-221ENST00000462352 HSP90AA4PQ58FG1 418 aa12.7□□□□□ -0.38
CPNE1-221ENST00000462352 RTP2Q5QGT7 225 aa12.7□□□□□ -0.38
CPNE1-221ENST00000462352 PLPP4Q5VZY2 271 aa12.7□□□□□ -0.38
CPNE1-221ENST00000462352 KRT39Q6A163 491 aa12.7□□□□□ -0.38
CPNE1-221ENST00000462352 DSTYKQ6XUX3 929 aa12.7□□□□□ -0.38
CPNE1-221ENST00000462352 PDZRN4Q6ZMN7 1036 aaPredicted RBP12.7□□□□□ -0.38
CPNE1-221ENST00000462352 CEP57Q86XR8 500 aa12.7□□□□□ -0.38
CPNE1-221ENST00000462352 CREBRFQ8IUR6 639 aa12.7□□□□□ -0.38
CPNE1-221ENST00000462352 FAM114A1Q8IWE2 563 aa12.7□□□□□ -0.38
CPNE1-221ENST00000462352 AOPEPQ8N6M6 819 aa12.7□□□□□ -0.38
CPNE1-221ENST00000462352 MICAL1Q8TDZ2 1067 aa12.7□□□□□ -0.38
CPNE1-221ENST00000462352 AUTS2Q8WXX7 1259 aa12.7□□□□□ -0.38
CPNE1-221ENST00000462352 SENP8Q96LD8 212 aa12.7□□□□□ -0.38
CPNE1-221ENST00000462352 TTPALQ9BTX7 342 aa12.7□□□□□ -0.38
CPNE1-221ENST00000462352 PCDHGC5Q9Y5F6 944 aa12.7□□□□□ -0.38
CPNE1-221ENST00000462352 UTP18Q9Y5J1 556 aaKnown RBP eCLIP12.7□□□□□ -0.38
CPNE1-221ENST00000462352 MTCH2Q9Y6C9 303 aa12.7□□□□□ -0.38
CPNE1-221ENST00000462352 SYN3O14994 580 aa12.69□□□□□ -0.38
CPNE1-221ENST00000462352 HLA-DRAP01903 254 aa12.69□□□□□ -0.38
CPNE1-221ENST00000462352 URODP06132 367 aa12.69□□□□□ -0.38
CPNE1-221ENST00000462352 TKTP29401 623 aaKnown RBP12.69□□□□□ -0.38
CPNE1-221ENST00000462352 CA8P35219 290 aa12.69□□□□□ -0.38
CPNE1-221ENST00000462352 MTIF2P46199 727 aaKnown RBP12.69□□□□□ -0.38
CPNE1-221ENST00000462352 MYL6P60660 151 aa12.69□□□□□ -0.38
CPNE1-221ENST00000462352 DSG1Q02413 1049 aa12.69□□□□□ -0.38
CPNE1-221ENST00000462352 MYO1EQ12965 1108 aa12.69□□□□□ -0.38
CPNE1-221ENST00000462352 SMC1AQ14683 1233 aaKnown RBP12.69□□□□□ -0.38
CPNE1-221ENST00000462352 PTPN14Q15678 1187 aa12.69□□□□□ -0.38
CPNE1-221ENST00000462352 CBWD6Q4V339 395 aa12.69□□□□□ -0.38
CPNE1-221ENST00000462352 CBWD3Q5JTY5 395 aa12.69□□□□□ -0.38
CPNE1-221ENST00000462352 CBWD5Q5RIA9 395 aa12.69□□□□□ -0.38
CPNE1-221ENST00000462352 CDKAL1Q5VV42 579 aa12.69□□□□□ -0.38
CPNE1-221ENST00000462352 KIAA0319Q5VV43 1072 aa12.69□□□□□ -0.38
CPNE1-221ENST00000462352 PDE12Q6L8Q7 609 aaKnown RBP12.69□□□□□ -0.38
CPNE1-221ENST00000462352 KIAA1841Q6NSI8 718 aa12.69□□□□□ -0.38
CPNE1-221ENST00000462352 DHX40Q8IX18 779 aaKnown RBP12.69□□□□□ -0.38
CPNE1-221ENST00000462352 TAS1R2Q8TE23 839 aa12.69□□□□□ -0.38
CPNE1-221ENST00000462352 HPDLQ96IR7 371 aa12.69□□□□□ -0.38
CPNE1-221ENST00000462352 XYLT2Q9H1B5 865 aa12.69□□□□□ -0.38
CPNE1-221ENST00000462352 NGRNQ9NPE2 291 aaKnown RBP12.69□□□□□ -0.38
CPNE1-221ENST00000462352 MRPL17Q9NRX2 175 aaKnown RBP12.69□□□□□ -0.38
CPNE1-221ENST00000462352 FANCLQ9NW38 375 aa12.69□□□□□ -0.38
CPNE1-221ENST00000462352 MAGEC2Q9UBF1 373 aaPredicted RBP12.69□□□□□ -0.38
CPNE1-221ENST00000462352 PCDHB8Q9UN66 801 aa12.69□□□□□ -0.38
CPNE1-221ENST00000462352 IRAK3Q9Y616 596 aa12.69□□□□□ -0.38
CPNE1-221ENST00000462352 SCN1AP35498 2009 aa12.69□□□□□ -0.38
CPNE1-221ENST00000462352 ZC3H11BA0A1B0GUI2 810 aaPredicted RBP12.68□□□□□ -0.38
CPNE1-221ENST00000462352 C2orf71A6NGG8 1288 aa12.68□□□□□ -0.38
CPNE1-221ENST00000462352 HIDE1A8MVS5 230 aa12.68□□□□□ -0.38
CPNE1-221ENST00000462352 KCNJ18B7U540 433 aa12.68□□□□□ -0.38
CPNE1-221ENST00000462352 C2CD2LO14523 706 aa12.68□□□□□ -0.38
CPNE1-221ENST00000462352 CYB561D2O14569 222 aa12.68□□□□□ -0.38
CPNE1-221ENST00000462352 LILRB3O75022 631 aa12.68□□□□□ -0.38
CPNE1-221ENST00000462352 CXCL14O95715 111 aa12.68□□□□□ -0.38
CPNE1-221ENST00000462352 STAU1O95793 577 aaKnown RBP12.68□□□□□ -0.38
CPNE1-221ENST00000462352 CAVIN2O95810 425 aa12.68□□□□□ -0.38
CPNE1-221ENST00000462352 AFPP02771 609 aaKnown RBP12.68□□□□□ -0.38
CPNE1-221ENST00000462352 ODC1P11926 461 aa12.68□□□□□ -0.38
CPNE1-221ENST00000462352 EEF1GP26641 437 aaKnown RBP12.68□□□□□ -0.38
CPNE1-221ENST00000462352 ATICP31939 592 aa12.68□□□□□ -0.38
CPNE1-221ENST00000462352 PIK3CAP42336 1068 aa12.68□□□□□ -0.38
CPNE1-221ENST00000462352 FMO5P49326 533 aa12.68□□□□□ -0.38
CPNE1-221ENST00000462352 KCNH2Q12809 1159 aa12.68□□□□□ -0.38
CPNE1-221ENST00000462352 KCNJ12Q14500 433 aa12.68□□□□□ -0.38
CPNE1-221ENST00000462352 BMS1Q14692 1282 aaKnown RBP12.68□□□□□ -0.38
CPNE1-221ENST00000462352 IQCB1Q15051 598 aa12.68□□□□□ -0.38
CPNE1-221ENST00000462352 ZNF699Q32M78 642 aa12.68□□□□□ -0.38
CPNE1-221ENST00000462352 TCP11X2Q5H9J9 407 aa12.68□□□□□ -0.38
CPNE1-221ENST00000462352 LRSAM1Q6UWE0 723 aa12.68□□□□□ -0.38
CPNE1-221ENST00000462352 GPR65Q8IYL9 337 aa12.68□□□□□ -0.38
CPNE1-221ENST00000462352 MRPL43Q8N983 215 aaKnown RBP12.68□□□□□ -0.38
CPNE1-221ENST00000462352 FBXL13Q8NEE6 735 aa12.68□□□□□ -0.38
CPNE1-221ENST00000462352 APPL2Q8NEU8 664 aa12.68□□□□□ -0.38
CPNE1-221ENST00000462352 LNX1Q8TBB1 728 aaPredicted RBP12.68□□□□□ -0.38
CPNE1-221ENST00000462352 RIN2Q8WYP3 895 aaPredicted RBP12.68□□□□□ -0.38
CPNE1-221ENST00000462352 PIK3R5Q8WYR1 880 aa12.68□□□□□ -0.38
CPNE1-221ENST00000462352 GDAP2Q9NXN4 497 aa12.68□□□□□ -0.38
CPNE1-221ENST00000462352 SSX2IPQ9Y2D8 614 aa12.68□□□□□ -0.38
CPNE1-221ENST00000462352 TIMM13Q9Y5L4 95 aaPredicted RBP12.68□□□□□ -0.38
CPNE1-221ENST00000462352 SNX9Q9Y5X1 595 aa12.68□□□□□ -0.38
CPNE1-221ENST00000462352 VWA8A3KMH1 1905 aa12.67□□□□□ -0.38
CPNE1-221ENST00000462352 ARHGEF37A1IGU5 675 aa12.67□□□□□ -0.38
CPNE1-221ENST00000462352 SMTNL1A8MU46 457 aa12.67□□□□□ -0.38
CPNE1-221ENST00000462352 PMM2O15305 246 aa12.67□□□□□ -0.38
CPNE1-221ENST00000462352 N4BP1O75113 896 aaKnown RBP12.67□□□□□ -0.38
CPNE1-221ENST00000462352 LRRN2O75325 713 aa12.67□□□□□ -0.38
CPNE1-221ENST00000462352 ASS1P00966 412 aaKnown RBP12.67□□□□□ -0.38
CPNE1-221ENST00000462352 FOSL2P15408 326 aa12.67□□□□□ -0.38
CPNE1-221ENST00000462352 TYMPP19971 482 aa12.67□□□□□ -0.38
CPNE1-221ENST00000462352 MYL7Q01449 175 aa12.67□□□□□ -0.38
CPNE1-221ENST00000462352 PSMD5Q16401 504 aa12.67□□□□□ -0.38
CPNE1-221ENST00000462352 SGSM1Q2NKQ1 1148 aa12.67□□□□□ -0.38
Retrieved 100 of 20,778 RNA–protein pairs in 18.3 ms