RNA–Protein interactions for RNA: ENST00000462236.1

COPS3-204, Transcript of COP9 signalosome subunit 3, humanhuman

TSL 5

Gene COPS3, Length 551 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COPS3-204ENST00000462236 GPR3P46089 330 aa5.97□□□□□ -1.45
COPS3-204ENST00000462236 NEK2P51955 445 aa5.97□□□□□ -1.45
COPS3-204ENST00000462236 CHRNDQ07001 517 aa5.97□□□□□ -1.45
COPS3-204ENST00000462236 DLX2Q07687 328 aaPredicted RBP5.97□□□□□ -1.45
COPS3-204ENST00000462236 TNFAIP1Q13829 316 aa5.97□□□□□ -1.45
COPS3-204ENST00000462236 UGT8Q16880 541 aa5.97□□□□□ -1.45
COPS3-204ENST00000462236 WDR72Q3MJ13 1102 aa5.97□□□□□ -1.45
COPS3-204ENST00000462236 VWA3BQ502W6 1294 aa5.97□□□□□ -1.45
COPS3-204ENST00000462236 FAM26FQ5R3K3 315 aa5.97□□□□□ -1.45
COPS3-204ENST00000462236 ZNF648Q5T619 568 aaPredicted RBP5.97□□□□□ -1.45
COPS3-204ENST00000462236 TMEM200BQ69YZ2 307 aa5.97□□□□□ -1.45
COPS3-204ENST00000462236 GRAMD4Q6IC98 578 aa5.97□□□□□ -1.45
COPS3-204ENST00000462236 ANKRD23Q86SG2 305 aa5.97□□□□□ -1.45
COPS3-204ENST00000462236 STK32CQ86UX6 486 aa5.97□□□□□ -1.45
COPS3-204ENST00000462236 REXO1L1PQ8IX06 675 aa5.97□□□□□ -1.45
COPS3-204ENST00000462236 LINC01356Q8N9X3 169 aa5.97□□□□□ -1.45
COPS3-204ENST00000462236 GUCD1Q96NT3 240 aa5.97□□□□□ -1.45
COPS3-204ENST00000462236 SYT3Q9BQG1 590 aa5.97□□□□□ -1.45
COPS3-204ENST00000462236 ANKRD2Q9GZV1 360 aa5.97□□□□□ -1.45
COPS3-204ENST00000462236 SEMA4AQ9H3S1 761 aa5.97□□□□□ -1.45
COPS3-204ENST00000462236 L2HGDHQ9H9P8 463 aa5.97□□□□□ -1.45
COPS3-204ENST00000462236 VEZTQ9HBM0 779 aa5.97□□□□□ -1.45
COPS3-204ENST00000462236 FTSJ1Q9UET6 329 aa5.97□□□□□ -1.45
COPS3-204ENST00000462236 GABRQQ9UN88 632 aa5.97□□□□□ -1.45
COPS3-204ENST00000462236 GBF1Q92538 1859 aa5.96□□□□□ -1.45
COPS3-204ENST00000462236 A0A0G2JNJ9 132 aa5.96□□□□□ -1.46
COPS3-204ENST00000462236 PRSS38A1L453 326 aa5.96□□□□□ -1.46
COPS3-204ENST00000462236 NRP2O60462 931 aa5.96□□□□□ -1.46
COPS3-204ENST00000462236 OPHN1O60890 802 aa5.96□□□□□ -1.46
COPS3-204ENST00000462236 KLHL18O94889 574 aa5.96□□□□□ -1.46
COPS3-204ENST00000462236 SARSP49591 514 aaKnown RBP5.96□□□□□ -1.46
COPS3-204ENST00000462236 AFF3P51826 1226 aaKnown RBP5.96□□□□□ -1.46
COPS3-204ENST00000462236 MLLT6P55198 1093 aaPredicted RBP5.96□□□□□ -1.46
COPS3-204ENST00000462236 SESN2P58004 480 aaPredicted RBP5.96□□□□□ -1.46
COPS3-204ENST00000462236 UBXN2AP68543 259 aa5.96□□□□□ -1.46
COPS3-204ENST00000462236 CD83Q01151 205 aa5.96□□□□□ -1.46
COPS3-204ENST00000462236 PRKCZQ05513 592 aa5.96□□□□□ -1.46
COPS3-204ENST00000462236 SNAPC2Q13487 334 aa5.96□□□□□ -1.46
COPS3-204ENST00000462236 NOLC1Q14978 699 aaKnown RBP eCLIP5.96□□□□□ -1.46
COPS3-204ENST00000462236 EIF4HQ15056 248 aaKnown RBP5.96□□□□□ -1.46
COPS3-204ENST00000462236 DGKDQ16760 1214 aa5.96□□□□□ -1.46
COPS3-204ENST00000462236 ZBTB41Q5SVQ8 909 aa5.96□□□□□ -1.46
COPS3-204ENST00000462236 ODR4Q5SWX8 454 aa5.96□□□□□ -1.46
COPS3-204ENST00000462236 TRMT10BQ6PF06 316 aaKnown RBP5.96□□□□□ -1.46
COPS3-204ENST00000462236 TDHQ8IZJ6 230 aa5.96□□□□□ -1.46
COPS3-204ENST00000462236 CDYL2Q8N8U2 506 aa5.96□□□□□ -1.46
COPS3-204ENST00000462236 C1orf162Q8NEQ5 155 aaPredicted RBP5.96□□□□□ -1.46
COPS3-204ENST00000462236 TDRD7Q8NHU6 1098 aaKnown RBP5.96□□□□□ -1.46
COPS3-204ENST00000462236 RAET1EQ8TD07 263 aa5.96□□□□□ -1.46
COPS3-204ENST00000462236 FUBP3Q96I24 572 aaKnown RBP eCLIP5.96□□□□□ -1.46
COPS3-204ENST00000462236 HIST1H2AHQ96KK5 128 aa5.96□□□□□ -1.46
COPS3-204ENST00000462236 ZSWIM3Q96MP5 696 aa5.96□□□□□ -1.46
COPS3-204ENST00000462236 YTHDC1Q96MU7 727 aaKnown RBP5.96□□□□□ -1.46
COPS3-204ENST00000462236 HIST1H2AJQ99878 128 aa5.96□□□□□ -1.46
COPS3-204ENST00000462236 TMEM39BQ9GZU3 492 aa5.96□□□□□ -1.46
COPS3-204ENST00000462236 CCDC8Q9H0W5 538 aaPredicted RBP5.96□□□□□ -1.46
COPS3-204ENST00000462236 MS4A5Q9H3V2 200 aa5.96□□□□□ -1.46
COPS3-204ENST00000462236 TDRD3Q9H7E2 651 aaKnown RBP5.96□□□□□ -1.46
COPS3-204ENST00000462236 Q9UFV3 132 aa5.96□□□□□ -1.46
COPS3-204ENST00000462236 CPA4Q9UI42 421 aa5.96□□□□□ -1.46
COPS3-204ENST00000462236 ZNF112Q9UJU3 913 aa5.96□□□□□ -1.46
COPS3-204ENST00000462236 VWA7Q9Y334 891 aa5.96□□□□□ -1.46
COPS3-204ENST00000462236 MRFAP1Q9Y605 127 aa5.96□□□□□ -1.46
COPS3-204ENST00000462236 APOL3O95236 402 aa5.95□□□□□ -1.46
COPS3-204ENST00000462236 IGHMBP2P38935 993 aaKnown RBP5.95□□□□□ -1.46
COPS3-204ENST00000462236 ETV4P43268 484 aa5.95□□□□□ -1.46
COPS3-204ENST00000462236 MAGEA10P43363 369 aaPredicted RBP5.95□□□□□ -1.46
COPS3-204ENST00000462236 SCAND1P57086 179 aa5.95□□□□□ -1.46
COPS3-204ENST00000462236 PPATQ06203 517 aa5.95□□□□□ -1.46
COPS3-204ENST00000462236 TOP3AQ13472 1001 aaPredicted RBP5.95□□□□□ -1.46
COPS3-204ENST00000462236 TTF1Q15361 905 aaPredicted RBP5.95□□□□□ -1.46
COPS3-204ENST00000462236 MAN2A1Q16706 1144 aa5.95□□□□□ -1.46
COPS3-204ENST00000462236 CPEB4Q17RY0 729 aaKnown RBP eCLIP5.95□□□□□ -1.46
COPS3-204ENST00000462236 ANO4Q32M45 955 aa5.95□□□□□ -1.46
COPS3-204ENST00000462236 FKBP1CQ5VVH2 108 aa5.95□□□□□ -1.46
COPS3-204ENST00000462236 KSR2Q6VAB6 950 aa5.95□□□□□ -1.46
COPS3-204ENST00000462236 CARFQ8N187 725 aa5.95□□□□□ -1.46
COPS3-204ENST00000462236 OR5AN1Q8NGI8 311 aa5.95□□□□□ -1.46
COPS3-204ENST00000462236 OR14C36Q8NHC7 312 aa5.95□□□□□ -1.46
COPS3-204ENST00000462236 DIS3LQ8TF46 1054 aaKnown RBP5.95□□□□□ -1.46
COPS3-204ENST00000462236 ZCCHC14Q8WYQ9 949 aaKnown RBP5.95□□□□□ -1.46
COPS3-204ENST00000462236 AJUBAQ96IF1 538 aa5.95□□□□□ -1.46
COPS3-204ENST00000462236 FAXDC2Q96IV6 333 aa5.95□□□□□ -1.46
COPS3-204ENST00000462236 ANO3Q9BYT9 981 aa5.95□□□□□ -1.46
COPS3-204ENST00000462236 OSBPL6Q9BZF3 934 aa5.95□□□□□ -1.46
COPS3-204ENST00000462236 MTG2Q9H4K7 406 aa5.95□□□□□ -1.46
COPS3-204ENST00000462236 SAE1Q9UBE0 346 aaPredicted RBP5.95□□□□□ -1.46
COPS3-204ENST00000462236 PLXNA1Q9UIW2 1896 aa5.95□□□□□ -1.46
COPS3-204ENST00000462236 TMPRSS11EQ9UL52 423 aa5.95□□□□□ -1.46
COPS3-204ENST00000462236 REV3LO60673 3130 aa5.95□□□□□ -1.46
COPS3-204ENST00000462236 RPTORQ8N122 1335 aa5.95□□□□□ -1.46
COPS3-204ENST00000462236 SIPA1L1O43166 1804 aa5.95□□□□□ -1.46
COPS3-204ENST00000462236 PRRC2BQ5JSZ5 2229 aaKnown RBP5.94□□□□□ -1.46
COPS3-204ENST00000462236 LCHNA4D1U4 455 aa5.94□□□□□ -1.46
COPS3-204ENST00000462236 TCP10L2B9ZVM9 353 aa5.94□□□□□ -1.46
COPS3-204ENST00000462236 NPIPB6E9PJ23 425 aa5.94□□□□□ -1.46
COPS3-204ENST00000462236 PDHXO00330 501 aa5.94□□□□□ -1.46
COPS3-204ENST00000462236 FFAR3O14843 346 aa5.94□□□□□ -1.46
COPS3-204ENST00000462236 TAF5LO75529 589 aa5.94□□□□□ -1.46
COPS3-204ENST00000462236 WDHD1O75717 1129 aaPredicted RBP5.94□□□□□ -1.46
Retrieved 100 of 20,778 RNA–protein pairs in 36.7 ms