RNA–Protein interactions for RNA: ENST00000461897.5

COL4A6-204, Transcript of collagen type IV alpha 6 chain, humanhuman

TSL 1 (best)

Gene COL4A6, Length 1,889 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL4A6-204ENST00000461897 IRF5Q13568 498 aa13.29□□□□□ -0.28
COL4A6-204ENST00000461897 CYP1B1Q16678 543 aa13.29□□□□□ -0.28
COL4A6-204ENST00000461897 EFCAB12Q6NXP0 572 aa13.29□□□□□ -0.28
COL4A6-204ENST00000461897 RHPN2Q8IUC4 686 aa13.29□□□□□ -0.28
COL4A6-204ENST00000461897 LINC01465Q8N7H1 131 aa13.29□□□□□ -0.28
COL4A6-204ENST00000461897 TMC2Q8TDI7 906 aa13.29□□□□□ -0.28
COL4A6-204ENST00000461897 IPO4Q8TEX9 1081 aaKnown RBP13.29□□□□□ -0.28
COL4A6-204ENST00000461897 LENG1Q96BZ8 264 aaPredicted RBP13.29□□□□□ -0.28
COL4A6-204ENST00000461897 HHIPL1Q96JK4 782 aa13.29□□□□□ -0.28
COL4A6-204ENST00000461897 POP1Q99575 1024 aaKnown RBP13.29□□□□□ -0.28
COL4A6-204ENST00000461897 CENPHQ9H3R5 247 aa13.29□□□□□ -0.28
COL4A6-204ENST00000461897 TUT1Q9H6E5 874 aaKnown RBP13.29□□□□□ -0.28
COL4A6-204ENST00000461897 ERVK-5Q9HDB9 667 aa13.29□□□□□ -0.28
COL4A6-204ENST00000461897 TOPORSQ9NS56 1045 aaPredicted RBP13.29□□□□□ -0.28
COL4A6-204ENST00000461897 TAS2R14Q9NYV8 317 aa13.29□□□□□ -0.28
COL4A6-204ENST00000461897 PCDHA3Q9Y5H8 950 aa13.29□□□□□ -0.28
COL4A6-204ENST00000461897 A0A0B4J269 797 aa13.28□□□□□ -0.28
COL4A6-204ENST00000461897 TNPO2O14787 897 aaKnown RBP13.28□□□□□ -0.28
COL4A6-204ENST00000461897 GZMAP12544 262 aa13.28□□□□□ -0.28
COL4A6-204ENST00000461897 ABCB4P21439 1286 aa13.28□□□□□ -0.28
COL4A6-204ENST00000461897 DRD4P21917 467 aa13.28□□□□□ -0.28
COL4A6-204ENST00000461897 TMOD1P28289 359 aa13.28□□□□□ -0.28
COL4A6-204ENST00000461897 MMP13P45452 471 aa13.28□□□□□ -0.28
COL4A6-204ENST00000461897 WNT7BP56706 349 aa13.28□□□□□ -0.28
COL4A6-204ENST00000461897 TNFAIP8L3Q5GJ75 292 aa13.28□□□□□ -0.28
COL4A6-204ENST00000461897 OLFML2BQ68BL8 750 aa13.28□□□□□ -0.28
COL4A6-204ENST00000461897 CRELD2Q6UXH1 353 aaPredicted RBP13.28□□□□□ -0.28
COL4A6-204ENST00000461897 PALB2Q86YC2 1186 aa13.28□□□□□ -0.28
COL4A6-204ENST00000461897 CCDC13Q8IYE1 715 aa13.28□□□□□ -0.28
COL4A6-204ENST00000461897 SOCS4Q8WXH5 440 aa13.28□□□□□ -0.28
COL4A6-204ENST00000461897 CD101Q93033 1021 aa13.28□□□□□ -0.28
COL4A6-204ENST00000461897 SEC16BQ96JE7 1060 aa13.28□□□□□ -0.28
COL4A6-204ENST00000461897 ZNF668Q96K58 619 aaPredicted RBP13.28□□□□□ -0.28
COL4A6-204ENST00000461897 RUNDC3BQ96NL0 473 aa13.28□□□□□ -0.28
COL4A6-204ENST00000461897 APBA2Q99767 749 aa13.28□□□□□ -0.28
COL4A6-204ENST00000461897 ZSWIM1Q9BR11 485 aa13.28□□□□□ -0.28
COL4A6-204ENST00000461897 CCDC134Q9H6E4 229 aa13.28□□□□□ -0.28
COL4A6-204ENST00000461897 GRHL1Q9NZI5 618 aa13.28□□□□□ -0.28
COL4A6-204ENST00000461897 ANKFY1Q9P2R3 1169 aa13.28□□□□□ -0.28
COL4A6-204ENST00000461897 PARP2Q9UGN5 583 aa13.28□□□□□ -0.28
COL4A6-204ENST00000461897 AGO2Q9UKV8 859 aaKnown RBP13.28□□□□□ -0.28
COL4A6-204ENST00000461897 DCDC2CA8MYV0 355 aa13.27□□□□□ -0.28
COL4A6-204ENST00000461897 GHRP10912 638 aa13.27□□□□□ -0.28
COL4A6-204ENST00000461897 RGS2P41220 211 aa13.27□□□□□ -0.28
COL4A6-204ENST00000461897 PEX5P50542 639 aa13.27□□□□□ -0.28
COL4A6-204ENST00000461897 PMS2P54278 862 aa13.27□□□□□ -0.28
COL4A6-204ENST00000461897 MAP2K1Q02750 393 aaPredicted RBP13.27□□□□□ -0.28
COL4A6-204ENST00000461897 ENPEPQ07075 957 aa13.27□□□□□ -0.28
COL4A6-204ENST00000461897 GRM1Q13255 1194 aa13.27□□□□□ -0.28
COL4A6-204ENST00000461897 DGKDQ16760 1214 aa13.27□□□□□ -0.28
COL4A6-204ENST00000461897 QPCTQ16769 361 aa13.27□□□□□ -0.28
COL4A6-204ENST00000461897 ODF2Q5BJF6 829 aa13.27□□□□□ -0.28
COL4A6-204ENST00000461897 ZBTB41Q5SVQ8 909 aa13.27□□□□□ -0.28
COL4A6-204ENST00000461897 SLFN12LQ6IEE8 588 aa13.27□□□□□ -0.28
COL4A6-204ENST00000461897 CYP4F22Q6NT55 531 aa13.27□□□□□ -0.28
COL4A6-204ENST00000461897 ZPBP2Q6X784 338 aa13.27□□□□□ -0.28
COL4A6-204ENST00000461897 CCDC121Q6ZUS5 278 aa13.27□□□□□ -0.28
COL4A6-204ENST00000461897 ZBTB8OSQ8IWT0 167 aa13.27□□□□□ -0.28
COL4A6-204ENST00000461897 UBL4BQ8N7F7 174 aa13.27□□□□□ -0.28
COL4A6-204ENST00000461897 PRELID2Q8N945 189 aa13.27□□□□□ -0.28
COL4A6-204ENST00000461897 NLRP4Q96MN2 994 aa13.27□□□□□ -0.28
COL4A6-204ENST00000461897 XPO6Q96QU8 1125 aaKnown RBP13.27□□□□□ -0.28
COL4A6-204ENST00000461897 WNT8AQ9H1J5 351 aa13.27□□□□□ -0.28
COL4A6-204ENST00000461897 KIAA1586Q9HCI6 787 aa13.27□□□□□ -0.28
COL4A6-204ENST00000461897 TMEM8AQ9HCN3 771 aa13.27□□□□□ -0.28
COL4A6-204ENST00000461897 ATP8A1Q9Y2Q0 1164 aa13.27□□□□□ -0.28
COL4A6-204ENST00000461897 COL1A2P08123 1366 aa13.27□□□□□ -0.28
COL4A6-204ENST00000461897 DNAH12Q6ZR08 3092 aa13.27□□□□□ -0.28
COL4A6-204ENST00000461897 A6NJR5 290 aa13.27□□□□□ -0.29
COL4A6-204ENST00000461897 H0YHG0 523 aa13.27□□□□□ -0.29
COL4A6-204ENST00000461897 CA12O43570 354 aa13.27□□□□□ -0.29
COL4A6-204ENST00000461897 RTN2O75298 545 aa13.27□□□□□ -0.29
COL4A6-204ENST00000461897 PRKCBP05771 671 aa13.27□□□□□ -0.29
COL4A6-204ENST00000461897 DLATP10515 647 aaKnown RBP13.27□□□□□ -0.29
COL4A6-204ENST00000461897 ACOT2P49753 483 aa13.27□□□□□ -0.29
COL4A6-204ENST00000461897 GPC5P78333 572 aa13.27□□□□□ -0.29
COL4A6-204ENST00000461897 IFFO1Q0D2I5 559 aa13.27□□□□□ -0.29
COL4A6-204ENST00000461897 CETN1Q12798 172 aa13.27□□□□□ -0.29
COL4A6-204ENST00000461897 KRT39Q6A163 491 aa13.27□□□□□ -0.29
COL4A6-204ENST00000461897 TLK2Q86UE8 772 aa13.27□□□□□ -0.29
COL4A6-204ENST00000461897 ARHGEF19Q8IW93 802 aa13.27□□□□□ -0.29
COL4A6-204ENST00000461897 CACNA2D3Q8IZS8 1091 aa13.27□□□□□ -0.29
COL4A6-204ENST00000461897 C12orf50Q8NA57 414 aaPredicted RBP13.27□□□□□ -0.29
COL4A6-204ENST00000461897 SEMA4DQ92854 862 aa13.27□□□□□ -0.29
COL4A6-204ENST00000461897 RNF25Q96BH1 459 aaPredicted RBP13.27□□□□□ -0.29
COL4A6-204ENST00000461897 FAM84AQ96KN4 292 aa13.27□□□□□ -0.29
COL4A6-204ENST00000461897 MSTO1Q9BUK6 570 aa13.27□□□□□ -0.29
COL4A6-204ENST00000461897 MRPL4Q9BYD3 311 aaKnown RBP13.27□□□□□ -0.29
COL4A6-204ENST00000461897 OSBPL7Q9BZF2 842 aa13.27□□□□□ -0.29
COL4A6-204ENST00000461897 C2orf40Q9H1Z8 148 aa13.27□□□□□ -0.29
COL4A6-204ENST00000461897 COQ4Q9Y3A0 265 aa13.27□□□□□ -0.29
COL4A6-204ENST00000461897 ABLIM1O14639 778 aa13.26□□□□□ -0.29
COL4A6-204ENST00000461897 DYNC1LI2O43237 492 aaPredicted RBP13.26□□□□□ -0.29
COL4A6-204ENST00000461897 FAM189A1O60320 539 aa13.26□□□□□ -0.29
COL4A6-204ENST00000461897 CAND2O75155 1236 aa13.26□□□□□ -0.29
COL4A6-204ENST00000461897 FTLP02792 175 aaPredicted RBP13.26□□□□□ -0.29
COL4A6-204ENST00000461897 CLDN10P78369 228 aa13.26□□□□□ -0.29
COL4A6-204ENST00000461897 TFDP1Q14186 410 aa13.26□□□□□ -0.29
COL4A6-204ENST00000461897 PSMD6Q15008 389 aa13.26□□□□□ -0.29
COL4A6-204ENST00000461897 MAPK6Q16659 721 aa13.26□□□□□ -0.29
Retrieved 100 of 20,778 RNA–protein pairs in 124.3 ms