RNA–Protein interactions for RNA: ENST00000461328.1

VARS-219, Transcript of valyl-tRNA synthetase, humanhuman

TSL 3

Gene VARS, Length 662 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VARS-219ENST00000461328 PCIF1Q9H4Z3 704 aa16.67■□□□□ 0.26
VARS-219ENST00000461328 ASB7Q9H672 318 aa16.67■□□□□ 0.26
VARS-219ENST00000461328 RBAKQ9NYW8 714 aaPredicted RBP16.67■□□□□ 0.26
VARS-219ENST00000461328 FAM120AQ9NZB2 1118 aaKnown RBP eCLIP16.67■□□□□ 0.26
VARS-219ENST00000461328 HPSEQ9Y251 543 aa16.67■□□□□ 0.26
VARS-219ENST00000461328 DERAQ9Y315 318 aa16.67■□□□□ 0.26
VARS-219ENST00000461328 UBE4BO95155 1302 aa16.67■□□□□ 0.26
VARS-219ENST00000461328 PVALEFA0A1B0GWK0 134 aa16.66■□□□□ 0.26
VARS-219ENST00000461328 A0A1W2PQ27 194 aa16.66■□□□□ 0.26
VARS-219ENST00000461328 A0A1W2PQ64 194 aa16.66■□□□□ 0.26
VARS-219ENST00000461328 A0A1W2PQD8 194 aa16.66■□□□□ 0.26
VARS-219ENST00000461328 ADRB2P07550 413 aa16.66■□□□□ 0.26
VARS-219ENST00000461328 FSHRP23945 695 aa16.66■□□□□ 0.26
VARS-219ENST00000461328 ELF1P32519 619 aa16.66■□□□□ 0.26
VARS-219ENST00000461328 PLA2G5P39877 138 aa16.66■□□□□ 0.26
VARS-219ENST00000461328 NDUFA8P51970 172 aa16.66■□□□□ 0.26
VARS-219ENST00000461328 ROR1Q01973 937 aa16.66■□□□□ 0.26
VARS-219ENST00000461328 TDGQ13569 410 aa16.66■□□□□ 0.26
VARS-219ENST00000461328 SPATA1Q5VX52 437 aa16.66■□□□□ 0.26
VARS-219ENST00000461328 ZNF280DQ6N043 979 aa16.66■□□□□ 0.26
VARS-219ENST00000461328 DSTYKQ6XUX3 929 aa16.66■□□□□ 0.26
VARS-219ENST00000461328 RTL10Q7L3V2 364 aa16.66■□□□□ 0.26
VARS-219ENST00000461328 ZNF461Q8TAF7 563 aa16.66■□□□□ 0.26
VARS-219ENST00000461328 KCNK12Q9HB15 430 aa16.66■□□□□ 0.26
VARS-219ENST00000461328 SLC39A2Q9NP94 309 aa16.66■□□□□ 0.26
VARS-219ENST00000461328 IGSF9Q9P2J2 1179 aa16.66■□□□□ 0.26
VARS-219ENST00000461328 FBXL5Q9UKA1 691 aa16.66■□□□□ 0.26
VARS-219ENST00000461328 PCDHB8Q9UN66 801 aa16.66■□□□□ 0.26
VARS-219ENST00000461328 C2CD2Q9Y426 696 aa16.66■□□□□ 0.26
VARS-219ENST00000461328 PRRG1O14668 218 aa16.65■□□□□ 0.26
VARS-219ENST00000461328 KIAA0391O15091 583 aaKnown RBP16.65■□□□□ 0.26
VARS-219ENST00000461328 EXTL3O43909 919 aa16.65■□□□□ 0.26
VARS-219ENST00000461328 NTHL1P78549 312 aa16.65■□□□□ 0.26
VARS-219ENST00000461328 TFAMQ00059 246 aaKnown RBP16.65■□□□□ 0.26
VARS-219ENST00000461328 POU5F1Q01860 360 aaKnown RBP16.65■□□□□ 0.26
VARS-219ENST00000461328 MRPL58Q14197 206 aaKnown RBP16.65■□□□□ 0.26
VARS-219ENST00000461328 BRSK2Q8IWQ3 736 aa16.65■□□□□ 0.26
VARS-219ENST00000461328 GPD1LQ8N335 351 aa16.65■□□□□ 0.26
VARS-219ENST00000461328 CCDC47Q96A33 483 aaKnown RBP16.65■□□□□ 0.26
VARS-219ENST00000461328 EPS15L1Q9UBC2 864 aa16.65■□□□□ 0.26
VARS-219ENST00000461328 WDR27A2RRH5 827 aa16.64■□□□□ 0.25
VARS-219ENST00000461328 M0QZQ0 153 aa16.64■□□□□ 0.25
VARS-219ENST00000461328 TBC1D4O60343 1298 aa16.64■□□□□ 0.25
VARS-219ENST00000461328 LRG1P02750 347 aa16.64■□□□□ 0.25
VARS-219ENST00000461328 POU2F2P09086 479 aa16.64■□□□□ 0.25
VARS-219ENST00000461328 LAMP2P13473 410 aa16.64■□□□□ 0.25
VARS-219ENST00000461328 YWHAHQ04917 246 aaPredicted RBP16.64■□□□□ 0.25
VARS-219ENST00000461328 C9orf57Q5W0N0 161 aa16.64■□□□□ 0.25
VARS-219ENST00000461328 CRELD2Q6UXH1 353 aaPredicted RBP16.64■□□□□ 0.25
VARS-219ENST00000461328 EPM2AIP1Q7L775 607 aaPredicted RBP16.64■□□□□ 0.25
VARS-219ENST00000461328 HS2ST1Q7LGA3 356 aa16.64■□□□□ 0.25
VARS-219ENST00000461328 USP37Q86T82 979 aa16.64■□□□□ 0.25
VARS-219ENST00000461328 ZSWIM2Q8NEG5 633 aa16.64■□□□□ 0.25
VARS-219ENST00000461328 CCDC34Q96HJ3 373 aa16.64■□□□□ 0.25
VARS-219ENST00000461328 KCNH6Q9H252 994 aa16.64■□□□□ 0.25
VARS-219ENST00000461328 GOLPH3LQ9H4A5 285 aa16.64■□□□□ 0.25
VARS-219ENST00000461328 DPP3Q9NY33 737 aa16.64■□□□□ 0.25
VARS-219ENST00000461328 MYO10Q9HD67 2058 aa16.63■□□□□ 0.25
VARS-219ENST00000461328 PPEF2O14830 753 aa16.63■□□□□ 0.25
VARS-219ENST00000461328 ABLIM3O94929 683 aa16.63■□□□□ 0.25
VARS-219ENST00000461328 PDGFBP01127 241 aaPredicted RBP16.63■□□□□ 0.25
VARS-219ENST00000461328 MYL1P05976 194 aa16.63■□□□□ 0.25
VARS-219ENST00000461328 ODC1P11926 461 aa16.63■□□□□ 0.25
VARS-219ENST00000461328 CPB1P15086 417 aa16.63■□□□□ 0.25
VARS-219ENST00000461328 ATF2P15336 505 aa16.63■□□□□ 0.25
VARS-219ENST00000461328 AARSP49588 968 aaKnown RBP eCLIP16.63■□□□□ 0.25
VARS-219ENST00000461328 CYP2J2P51589 502 aa16.63■□□□□ 0.25
VARS-219ENST00000461328 EHHADHQ08426 723 aa16.63■□□□□ 0.25
VARS-219ENST00000461328 KMT5BQ4FZB7 885 aa16.63■□□□□ 0.25
VARS-219ENST00000461328 TPGS2Q68CL5 300 aa16.63■□□□□ 0.25
VARS-219ENST00000461328 NT5DC4Q86YG4 428 aa16.63■□□□□ 0.25
VARS-219ENST00000461328 EFCAB13Q8IY85 973 aa16.63■□□□□ 0.25
VARS-219ENST00000461328 ZNF507Q8TCN5 953 aa16.63■□□□□ 0.25
VARS-219ENST00000461328 SCFD1Q8WVM8 642 aa16.63■□□□□ 0.25
VARS-219ENST00000461328 RSAD2Q8WXG1 361 aa16.63■□□□□ 0.25
VARS-219ENST00000461328 NXPE3Q969Y0 559 aa16.63■□□□□ 0.25
VARS-219ENST00000461328 CYP4F11Q9HBI6 524 aa16.63■□□□□ 0.25
VARS-219ENST00000461328 AGPAT3Q9NRZ7 376 aa16.63■□□□□ 0.25
VARS-219ENST00000461328 HCFC1R1Q9NWW0 138 aa16.63■□□□□ 0.25
VARS-219ENST00000461328 HSPBP1Q9NZL4 362 aa16.63■□□□□ 0.25
VARS-219ENST00000461328 DUSP12Q9UNI6 340 aa16.63■□□□□ 0.25
VARS-219ENST00000461328 TIMM13Q9Y5L4 95 aaPredicted RBP16.63■□□□□ 0.25
VARS-219ENST00000461328 ZFP37Q9Y6Q3 630 aaPredicted RBP16.63■□□□□ 0.25
VARS-219ENST00000461328 FAM237AA0A1B0GTK4 181 aa16.62■□□□□ 0.25
VARS-219ENST00000461328 ARHGEF37A1IGU5 675 aa16.62■□□□□ 0.25
VARS-219ENST00000461328 ZNF233A6NK53 670 aa16.62■□□□□ 0.25
VARS-219ENST00000461328 RPN1P04843 607 aaKnown RBP16.62■□□□□ 0.25
VARS-219ENST00000461328 TMEM191BP0C7N4 346 aa16.62■□□□□ 0.25
VARS-219ENST00000461328 PAX3P23760 479 aa16.62■□□□□ 0.25
VARS-219ENST00000461328 HOXD13P35453 343 aa16.62■□□□□ 0.25
VARS-219ENST00000461328 PABPC1LQ4VXU2 614 aaKnown RBP16.62■□□□□ 0.25
VARS-219ENST00000461328 KRBA2Q6ZNG9 492 aa16.62■□□□□ 0.25
VARS-219ENST00000461328 CACTINQ8WUQ7 758 aaKnown RBP16.62■□□□□ 0.25
VARS-219ENST00000461328 ZNF560Q96MR9 790 aa16.62■□□□□ 0.25
VARS-219ENST00000461328 OXCT2Q9BYC2 517 aaPredicted RBP16.62■□□□□ 0.25
VARS-219ENST00000461328 MFSD1Q9H3U5 465 aa16.62■□□□□ 0.25
VARS-219ENST00000461328 DNMT3BQ9UBC3 853 aaKnown RBP16.62■□□□□ 0.25
VARS-219ENST00000461328 FBXL21Q9UKT6 434 aa16.62■□□□□ 0.25
VARS-219ENST00000461328 CDH7Q9ULB5 785 aa16.62■□□□□ 0.25
VARS-219ENST00000461328 R3HCC1Q9Y3T6 440 aaKnown RBP16.62■□□□□ 0.25
Retrieved 100 of 20,778 RNA–protein pairs in 40.4 ms