RNA–Protein interactions for RNA: ENST00000461221.5

BRCA1-205, Transcript of BRCA1, DNA repair associated, humanhuman

TSL 1 (best)

Gene BRCA1, Length 5,693 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
BRCA1-205ENST00000461221 SLC26A4O43511 780 aa9.4□□□□□ -0.9
BRCA1-205ENST00000461221 PGK2P07205 417 aa9.4□□□□□ -0.9
BRCA1-205ENST00000461221 ALOX15P16050 662 aaPredicted RBP9.4□□□□□ -0.9
BRCA1-205ENST00000461221 ACADSP16219 412 aa9.4□□□□□ -0.9
BRCA1-205ENST00000461221 RRM2P31350 389 aa9.4□□□□□ -0.9
BRCA1-205ENST00000461221 GUCA1AP43080 201 aaPredicted RBP9.4□□□□□ -0.9
BRCA1-205ENST00000461221 CRKP46108 304 aa9.4□□□□□ -0.9
BRCA1-205ENST00000461221 NPEPPSP55786 919 aa9.4□□□□□ -0.9
BRCA1-205ENST00000461221 PURAQ00577 322 aaKnown RBP9.4□□□□□ -0.9
BRCA1-205ENST00000461221 PDK1Q15118 436 aa9.4□□□□□ -0.9
BRCA1-205ENST00000461221 EPHA7Q15375 998 aa9.4□□□□□ -0.9
BRCA1-205ENST00000461221 TMEM47Q9BQJ4 181 aa9.4□□□□□ -0.9
BRCA1-205ENST00000461221 TRPC7Q9HCX4 862 aa9.4□□□□□ -0.9
BRCA1-205ENST00000461221 ARHGEF3Q9NR81 526 aa9.4□□□□□ -0.9
BRCA1-205ENST00000461221 UTP6Q9NYH9 597 aaKnown RBP9.4□□□□□ -0.9
BRCA1-205ENST00000461221 SMARCAL1Q9NZC9 954 aa9.4□□□□□ -0.9
BRCA1-205ENST00000461221 IL1RAPL1Q9NZN1 696 aa9.4□□□□□ -0.9
BRCA1-205ENST00000461221 NDUFA13Q9P0J0 144 aa9.4□□□□□ -0.9
BRCA1-205ENST00000461221 CAMSAP3Q9P1Y5 1249 aaPredicted RBP9.4□□□□□ -0.9
BRCA1-205ENST00000461221 AMACRQ9UHK6 382 aa9.4□□□□□ -0.9
BRCA1-205ENST00000461221 HEATR9A2RTY3 570 aa9.4□□□□□ -0.9
BRCA1-205ENST00000461221 XPO1O14980 1071 aaKnown RBP9.4□□□□□ -0.9
BRCA1-205ENST00000461221 MTSS1O43312 755 aa9.4□□□□□ -0.9
BRCA1-205ENST00000461221 SOAT2O75908 522 aa9.4□□□□□ -0.9
BRCA1-205ENST00000461221 ATP1A1P05023 1023 aaKnown RBP9.4□□□□□ -0.9
BRCA1-205ENST00000461221 APRTP07741 180 aa9.4□□□□□ -0.9
BRCA1-205ENST00000461221 PSMA4P25789 261 aaKnown RBP9.4□□□□□ -0.9
BRCA1-205ENST00000461221 USP11P51784 963 aa9.4□□□□□ -0.9
BRCA1-205ENST00000461221 RBP5P82980 135 aa9.4□□□□□ -0.9
BRCA1-205ENST00000461221 CCDC81Q6ZN84 652 aa9.4□□□□□ -0.9
BRCA1-205ENST00000461221 ANKRD49Q8WVL7 239 aa9.4□□□□□ -0.9
BRCA1-205ENST00000461221 WNK4Q96J92 1243 aa9.4□□□□□ -0.9
BRCA1-205ENST00000461221 PRRG3Q9BZD7 231 aa9.4□□□□□ -0.9
BRCA1-205ENST00000461221 MTIF3Q9H2K0 278 aaKnown RBP9.4□□□□□ -0.9
BRCA1-205ENST00000461221 PRDM5Q9NQX1 630 aaPredicted RBP9.4□□□□□ -0.9
BRCA1-205ENST00000461221 CTNNAL1Q9UBT7 734 aa9.4□□□□□ -0.9
BRCA1-205ENST00000461221 EIF3LQ9Y262 564 aaKnown RBP9.4□□□□□ -0.9
BRCA1-205ENST00000461221 NEU2Q9Y3R4 380 aa9.4□□□□□ -0.9
BRCA1-205ENST00000461221 MORC2Q9Y6X9 1032 aaPredicted RBP9.4□□□□□ -0.9
BRCA1-205ENST00000461221 ALDH1A2O94788 518 aa9.4□□□□□ -0.9
BRCA1-205ENST00000461221 MYCP01106 439 aaPredicted RBP9.4□□□□□ -0.9
BRCA1-205ENST00000461221 FCER1AP12319 257 aa9.4□□□□□ -0.9
BRCA1-205ENST00000461221 ACADSBP45954 432 aa9.4□□□□□ -0.9
BRCA1-205ENST00000461221 NECTIN1Q15223 517 aa9.4□□□□□ -0.9
BRCA1-205ENST00000461221 CNGA2Q16280 664 aa9.4□□□□□ -0.9
BRCA1-205ENST00000461221 APOBEC3FQ8IUX4 373 aaKnown RBP9.4□□□□□ -0.9
BRCA1-205ENST00000461221 FAM9CQ8IZT9 166 aa9.4□□□□□ -0.9
BRCA1-205ENST00000461221 SH3RF3Q8TEJ3 882 aaPredicted RBP9.4□□□□□ -0.9
BRCA1-205ENST00000461221 XPO6Q96QU8 1125 aaKnown RBP9.4□□□□□ -0.9
BRCA1-205ENST00000461221 STRBPQ96SI9 672 aaKnown RBP9.4□□□□□ -0.9
BRCA1-205ENST00000461221 MUC3BQ9H195 1237 aa9.4□□□□□ -0.9
BRCA1-205ENST00000461221 KRT84Q9NSB2 600 aa9.4□□□□□ -0.9
BRCA1-205ENST00000461221 ABCC2Q92887 1545 aa9.4□□□□□ -0.91
BRCA1-205ENST00000461221 TTC26A0AVF1 554 aa9.4□□□□□ -0.91
BRCA1-205ENST00000461221 USP17L10C9JJH3 530 aa9.4□□□□□ -0.91
BRCA1-205ENST00000461221 PRKCBP05771 671 aa9.4□□□□□ -0.91
BRCA1-205ENST00000461221 MAPK1P28482 360 aa9.4□□□□□ -0.91
BRCA1-205ENST00000461221 VHLP40337 213 aa9.4□□□□□ -0.91
BRCA1-205ENST00000461221 SLC16A1P53985 500 aa9.4□□□□□ -0.91
BRCA1-205ENST00000461221 KYNUQ16719 465 aa9.4□□□□□ -0.91
BRCA1-205ENST00000461221 PPP1R14AQ96A00 147 aa9.4□□□□□ -0.91
BRCA1-205ENST00000461221 NSL1Q96IY1 281 aa9.4□□□□□ -0.91
BRCA1-205ENST00000461221 ADGRA2Q96PE1 1338 aa9.4□□□□□ -0.91
BRCA1-205ENST00000461221 ECSITQ9BQ95 431 aa9.4□□□□□ -0.91
BRCA1-205ENST00000461221 FRMD8Q9BZ67 464 aaPredicted RBP9.4□□□□□ -0.91
BRCA1-205ENST00000461221 RAB6BQ9NRW1 208 aa9.4□□□□□ -0.91
BRCA1-205ENST00000461221 B2RBV5 119 aa9.39□□□□□ -0.91
BRCA1-205ENST00000461221 VWA5AO00534 786 aa9.39□□□□□ -0.91
BRCA1-205ENST00000461221 EIF3HO15372 352 aaKnown RBP eCLIP9.39□□□□□ -0.91
BRCA1-205ENST00000461221 LARGE1O95461 756 aa9.39□□□□□ -0.91
BRCA1-205ENST00000461221 EYA4O95677 639 aa9.39□□□□□ -0.91
BRCA1-205ENST00000461221 WEE2P0C1S8 567 aa9.39□□□□□ -0.91
BRCA1-205ENST00000461221 STX5Q13190 355 aa9.39□□□□□ -0.91
BRCA1-205ENST00000461221 KCNB1Q14721 858 aa9.39□□□□□ -0.91
BRCA1-205ENST00000461221 NCF4Q15080 339 aa9.39□□□□□ -0.91
BRCA1-205ENST00000461221 CACHD1Q5VU97 1274 aa9.39□□□□□ -0.91
BRCA1-205ENST00000461221 SDE2Q6IQ49 451 aa9.39□□□□□ -0.91
BRCA1-205ENST00000461221 KDELC2Q7Z4H8 507 aa9.39□□□□□ -0.91
BRCA1-205ENST00000461221 GPR141Q7Z602 305 aa9.39□□□□□ -0.91
BRCA1-205ENST00000461221 TTLL6Q8N841 843 aa9.39□□□□□ -0.91
BRCA1-205ENST00000461221 FAR2Q96K12 515 aa9.39□□□□□ -0.91
BRCA1-205ENST00000461221 AGAP3Q96P47 875 aa9.39□□□□□ -0.91
BRCA1-205ENST00000461221 SH3GL1Q99961 368 aa9.39□□□□□ -0.91
BRCA1-205ENST00000461221 EIF2AK1Q9BQI3 630 aaKnown RBP9.39□□□□□ -0.91
BRCA1-205ENST00000461221 RMND5AQ9H871 391 aa9.39□□□□□ -0.91
BRCA1-205ENST00000461221 MAN1C1Q9NR34 630 aa9.39□□□□□ -0.91
BRCA1-205ENST00000461221 SNX12Q9UMY4 172 aa9.39□□□□□ -0.91
BRCA1-205ENST00000461221 UTYO14607 1347 aa9.39□□□□□ -0.91
BRCA1-205ENST00000461221 POTEFA5A3E0 1075 aa9.39□□□□□ -0.91
BRCA1-205ENST00000461221 POTEIP0CG38 1075 aa9.39□□□□□ -0.91
BRCA1-205ENST00000461221 PRIM2P49643 509 aa9.39□□□□□ -0.91
BRCA1-205ENST00000461221 CACNB2Q08289 660 aaPredicted RBP9.39□□□□□ -0.91
BRCA1-205ENST00000461221 BFSP2Q13515 415 aa9.39□□□□□ -0.91
BRCA1-205ENST00000461221 ARID5BQ14865 1188 aa9.39□□□□□ -0.91
BRCA1-205ENST00000461221 IL31Q6EBC2 164 aa9.39□□□□□ -0.91
BRCA1-205ENST00000461221 FAM45BPQ6NSW5 357 aa9.39□□□□□ -0.91
BRCA1-205ENST00000461221 POTEGQ6S5H5 508 aa9.39□□□□□ -0.91
BRCA1-205ENST00000461221 POTEEQ6S8J3 1075 aa9.39□□□□□ -0.91
BRCA1-205ENST00000461221 TRPM8Q7Z2W7 1104 aa9.39□□□□□ -0.91
BRCA1-205ENST00000461221 HAUS6Q7Z4H7 955 aa9.39□□□□□ -0.91
Retrieved 100 of 20,778 RNA–protein pairs in 32.3 ms