RNA–Protein interactions for RNA: ENST00000461113.5

HDAC4-207, Transcript of histone deacetylase 4, humanhuman

TSL 1 (best)

Gene HDAC4, Length 1,019 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC4-207ENST00000461113 THP07101 528 aa13.6□□□□□ -0.23
HDAC4-207ENST00000461113 CTSAP10619 480 aa13.6□□□□□ -0.23
HDAC4-207ENST00000461113 POU5F1Q01860 360 aaKnown RBP13.6□□□□□ -0.23
HDAC4-207ENST00000461113 PPP2R3AQ06190 1150 aa13.6□□□□□ -0.23
HDAC4-207ENST00000461113 EHHADHQ08426 723 aa13.6□□□□□ -0.23
HDAC4-207ENST00000461113 DMWDQ09019 674 aa13.6□□□□□ -0.23
HDAC4-207ENST00000461113 GRIK3Q13003 919 aa13.6□□□□□ -0.23
HDAC4-207ENST00000461113 STK4Q13043 487 aa13.6□□□□□ -0.23
HDAC4-207ENST00000461113 PTPN14Q15678 1187 aa13.6□□□□□ -0.23
HDAC4-207ENST00000461113 BMT2Q1RMZ1 405 aa13.6□□□□□ -0.23
HDAC4-207ENST00000461113 EPM2AIP1Q7L775 607 aaPredicted RBP13.6□□□□□ -0.23
HDAC4-207ENST00000461113 PPFIBP1Q86W92 1011 aa13.6□□□□□ -0.23
HDAC4-207ENST00000461113 TMEM173Q86WV6 379 aaPredicted RBP13.6□□□□□ -0.23
HDAC4-207ENST00000461113 SCFD1Q8WVM8 642 aa13.6□□□□□ -0.23
HDAC4-207ENST00000461113 TSPAN18Q96SJ8 248 aa13.6□□□□□ -0.23
HDAC4-207ENST00000461113 NUP62CLQ9H1M0 184 aa13.6□□□□□ -0.23
HDAC4-207ENST00000461113 PARD6AQ9NPB6 346 aa13.6□□□□□ -0.23
HDAC4-207ENST00000461113 TBC1D13Q9NVG8 400 aa13.6□□□□□ -0.23
HDAC4-207ENST00000461113 SPATA6Q9NWH7 488 aaPredicted RBP13.6□□□□□ -0.23
HDAC4-207ENST00000461113 EPS15L1Q9UBC2 864 aa13.6□□□□□ -0.23
HDAC4-207ENST00000461113 PCDHGA2Q9Y5H1 932 aa13.6□□□□□ -0.23
HDAC4-207ENST00000461113 STYXL1Q9Y6J8 313 aa13.6□□□□□ -0.23
HDAC4-207ENST00000461113 ZC3H11AO75152 810 aaKnown RBP eCLIP13.59□□□□□ -0.23
HDAC4-207ENST00000461113 RPL13P26373 211 aaKnown RBP13.59□□□□□ -0.23
HDAC4-207ENST00000461113 KLRC2P26717 231 aa13.59□□□□□ -0.23
HDAC4-207ENST00000461113 SCNN1GP51170 649 aa13.59□□□□□ -0.23
HDAC4-207ENST00000461113 KCNA1Q09470 495 aa13.59□□□□□ -0.23
HDAC4-207ENST00000461113 CAMK4Q16566 473 aa13.59□□□□□ -0.23
HDAC4-207ENST00000461113 ZNF658Q5TYW1 1059 aaPredicted RBP13.59□□□□□ -0.23
HDAC4-207ENST00000461113 C15orf39Q6ZRI6 1047 aa13.59□□□□□ -0.23
HDAC4-207ENST00000461113 DDX53Q86TM3 631 aaKnown RBP13.59□□□□□ -0.23
HDAC4-207ENST00000461113 GUF1Q8N442 669 aaKnown RBP13.59□□□□□ -0.23
HDAC4-207ENST00000461113 SYAP1Q96A49 352 aaPredicted RBP13.59□□□□□ -0.23
HDAC4-207ENST00000461113 FAM212AQ96EL1 285 aa13.59□□□□□ -0.23
HDAC4-207ENST00000461113 MYADMQ96S97 322 aa13.59□□□□□ -0.23
HDAC4-207ENST00000461113 TSG101Q99816 390 aa13.59□□□□□ -0.23
HDAC4-207ENST00000461113 TMEM175Q9BSA9 504 aa13.59□□□□□ -0.23
HDAC4-207ENST00000461113 COLEC11Q9BWP8 271 aa13.59□□□□□ -0.23
HDAC4-207ENST00000461113 CLSTN2Q9H4D0 955 aa13.59□□□□□ -0.23
HDAC4-207ENST00000461113 STK39Q9UEW8 545 aa13.59□□□□□ -0.23
HDAC4-207ENST00000461113 FBXO4Q9UKT5 387 aa13.59□□□□□ -0.23
HDAC4-207ENST00000461113 FAN1Q9Y2M0 1017 aa13.59□□□□□ -0.23
HDAC4-207ENST00000461113 MEIS3P2A8K0S8 358 aa13.58□□□□□ -0.24
HDAC4-207ENST00000461113 PSMA7O14818 248 aa13.58□□□□□ -0.24
HDAC4-207ENST00000461113 INPPL1O15357 1258 aa13.58□□□□□ -0.24
HDAC4-207ENST00000461113 EXTL3O43909 919 aa13.58□□□□□ -0.24
HDAC4-207ENST00000461113 MCM4P33991 863 aa13.58□□□□□ -0.24
HDAC4-207ENST00000461113 CLCN4P51793 760 aa13.58□□□□□ -0.24
HDAC4-207ENST00000461113 SURF1Q15526 300 aa13.58□□□□□ -0.24
HDAC4-207ENST00000461113 GPD1LQ8N335 351 aa13.58□□□□□ -0.24
HDAC4-207ENST00000461113 TRIML1Q8N9V2 468 aa13.58□□□□□ -0.24
HDAC4-207ENST00000461113 KIAA0895Q8NCT3 520 aa13.58□□□□□ -0.24
HDAC4-207ENST00000461113 GLIS3Q8NEA6 775 aa13.58□□□□□ -0.24
HDAC4-207ENST00000461113 ST13P5Q8NFI4 369 aaPredicted RBP13.58□□□□□ -0.24
HDAC4-207ENST00000461113 BCL7CQ8WUZ0 217 aaPredicted RBP13.58□□□□□ -0.24
HDAC4-207ENST00000461113 NXPE3Q969Y0 559 aa13.58□□□□□ -0.24
HDAC4-207ENST00000461113 ZFP42Q96MM3 310 aa13.58□□□□□ -0.24
HDAC4-207ENST00000461113 KLHL5Q96PQ7 755 aa13.58□□□□□ -0.24
HDAC4-207ENST00000461113 FAM213AQ9BRX8 229 aa13.58□□□□□ -0.24
HDAC4-207ENST00000461113 FGFBP2Q9BYJ0 223 aa13.58□□□□□ -0.24
HDAC4-207ENST00000461113 BCO2Q9BYV7 579 aa13.58□□□□□ -0.24
HDAC4-207ENST00000461113 EPC1Q9H2F5 836 aa13.58□□□□□ -0.24
HDAC4-207ENST00000461113 PCIF1Q9H4Z3 704 aa13.58□□□□□ -0.24
HDAC4-207ENST00000461113 WDR6Q9NNW5 1121 aaKnown RBP13.58□□□□□ -0.24
HDAC4-207ENST00000461113 AGPAT3Q9NRZ7 376 aa13.58□□□□□ -0.24
HDAC4-207ENST00000461113 KIAA1468Q9P260 1216 aa13.58□□□□□ -0.24
HDAC4-207ENST00000461113 R3HCC1Q9Y3T6 440 aaKnown RBP13.58□□□□□ -0.24
HDAC4-207ENST00000461113 ZNF233A6NK53 670 aa13.57□□□□□ -0.24
HDAC4-207ENST00000461113 PDXKO00764 312 aa13.57□□□□□ -0.24
HDAC4-207ENST00000461113 ABLIM1O14639 778 aa13.57□□□□□ -0.24
HDAC4-207ENST00000461113 SLC30A4O14863 429 aa13.57□□□□□ -0.24
HDAC4-207ENST00000461113 EXOC3O60645 756 aa13.57□□□□□ -0.24
HDAC4-207ENST00000461113 IL18RAPO95256 599 aa13.57□□□□□ -0.24
HDAC4-207ENST00000461113 KCNA4P22459 653 aa13.57□□□□□ -0.24
HDAC4-207ENST00000461113 OR1G1P47890 313 aa13.57□□□□□ -0.24
HDAC4-207ENST00000461113 ACOT2P49753 483 aa13.57□□□□□ -0.24
HDAC4-207ENST00000461113 CYP2J2P51589 502 aa13.57□□□□□ -0.24
HDAC4-207ENST00000461113 STARD6P59095 220 aa13.57□□□□□ -0.24
HDAC4-207ENST00000461113 TUSC3Q13454 348 aa13.57□□□□□ -0.24
HDAC4-207ENST00000461113 SEZ6Q53EL9 994 aa13.57□□□□□ -0.24
HDAC4-207ENST00000461113 SLC39A4Q6P5W5 647 aa13.57□□□□□ -0.24
HDAC4-207ENST00000461113 USP37Q86T82 979 aa13.57□□□□□ -0.24
HDAC4-207ENST00000461113 CEP120Q8N960 986 aa13.57□□□□□ -0.24
HDAC4-207ENST00000461113 XXYLT1Q8NBI6 393 aa13.57□□□□□ -0.24
HDAC4-207ENST00000461113 ZBTB44Q8NCP5 570 aa13.57□□□□□ -0.24
HDAC4-207ENST00000461113 SPATA20Q8TB22 786 aa13.57□□□□□ -0.24
HDAC4-207ENST00000461113 CACTINQ8WUQ7 758 aaKnown RBP13.57□□□□□ -0.24
HDAC4-207ENST00000461113 DDX27Q96GQ7 796 aaKnown RBP13.57□□□□□ -0.24
HDAC4-207ENST00000461113 IGSF21Q96ID5 467 aa13.57□□□□□ -0.24
HDAC4-207ENST00000461113 UROC1Q96N76 676 aa13.57□□□□□ -0.24
HDAC4-207ENST00000461113 EMILIN2Q9BXX0 1053 aa13.57□□□□□ -0.24
HDAC4-207ENST00000461113 ASB7Q9H672 318 aa13.57□□□□□ -0.24
HDAC4-207ENST00000461113 NRDE2Q9H7Z3 1164 aa13.57□□□□□ -0.24
HDAC4-207ENST00000461113 SLC2A4RGQ9NR83 387 aa13.57□□□□□ -0.24
HDAC4-207ENST00000461113 ZSCAN32Q9NX65 697 aa13.57□□□□□ -0.24
HDAC4-207ENST00000461113 HSPBP1Q9NZL4 362 aa13.57□□□□□ -0.24
HDAC4-207ENST00000461113 GMEB2Q9UKD1 530 aa13.57□□□□□ -0.24
HDAC4-207ENST00000461113 MAN1B1Q9UKM7 699 aa13.57□□□□□ -0.24
HDAC4-207ENST00000461113 ANGPTL2Q9UKU9 493 aa13.57□□□□□ -0.24
HDAC4-207ENST00000461113 MAPK8IP1Q9UQF2 711 aa13.57□□□□□ -0.24
Retrieved 100 of 20,778 RNA–protein pairs in 41.5 ms