RNA–Protein interactions for RNA: ENST00000460509.1

VBP1-202, Transcript of VHL binding protein 1, humanhuman

TSL 2

Gene VBP1, Length 586 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VBP1-202ENST00000460509 PDCD4Q53EL6 469 aaKnown RBP5.9□□□□□ -1.46
VBP1-202ENST00000460509 RABL3Q5HYI8 236 aa5.9□□□□□ -1.46
VBP1-202ENST00000460509 FAM102AQ5T9C2 384 aaPredicted RBP5.9□□□□□ -1.46
VBP1-202ENST00000460509 NAIF1Q69YI7 327 aaPredicted RBP5.9□□□□□ -1.46
VBP1-202ENST00000460509 CCSAPQ6IQ19 270 aaPredicted RBP5.9□□□□□ -1.46
VBP1-202ENST00000460509 FOXR2Q6PJQ5 311 aa5.9□□□□□ -1.46
VBP1-202ENST00000460509 APOA5Q6Q788 366 aa5.9□□□□□ -1.46
VBP1-202ENST00000460509 RAB11FIP1Q6WKZ4 1283 aaPredicted RBP5.9□□□□□ -1.46
VBP1-202ENST00000460509 SPATA31D4Q6ZUB0 917 aa5.9□□□□□ -1.46
VBP1-202ENST00000460509 GDF7Q7Z4P5 450 aa5.9□□□□□ -1.46
VBP1-202ENST00000460509 NSUN7Q8NE18 718 aaKnown RBP5.9□□□□□ -1.46
VBP1-202ENST00000460509 OR56A1Q8NGH5 318 aa5.9□□□□□ -1.46
VBP1-202ENST00000460509 NUP133Q8WUM0 1156 aa5.9□□□□□ -1.46
VBP1-202ENST00000460509 KLHL32Q96NJ5 620 aa5.9□□□□□ -1.46
VBP1-202ENST00000460509 NEU1Q99519 415 aa5.9□□□□□ -1.46
VBP1-202ENST00000460509 TLR10Q9BXR5 811 aa5.9□□□□□ -1.46
VBP1-202ENST00000460509 TEX101Q9BY14 249 aa5.9□□□□□ -1.46
VBP1-202ENST00000460509 C22orf23Q9BZE7 217 aa5.9□□□□□ -1.46
VBP1-202ENST00000460509 ATP6V0A4Q9HBG4 840 aa5.9□□□□□ -1.46
VBP1-202ENST00000460509 CAMSAP3Q9P1Y5 1249 aaPredicted RBP5.9□□□□□ -1.46
VBP1-202ENST00000460509 USP25Q9UHP3 1055 aa5.9□□□□□ -1.46
VBP1-202ENST00000460509 MTO1Q9Y2Z2 717 aaKnown RBP5.9□□□□□ -1.46
VBP1-202ENST00000460509 USP19O94966 1318 aa5.9□□□□□ -1.47
VBP1-202ENST00000460509 PRSS29PA6NIE9 313 aa5.89□□□□□ -1.47
VBP1-202ENST00000460509 VPS4BO75351 444 aa5.89□□□□□ -1.47
VBP1-202ENST00000460509 HRGP04196 525 aa5.89□□□□□ -1.47
VBP1-202ENST00000460509 MYL3P08590 195 aa5.89□□□□□ -1.47
VBP1-202ENST00000460509 FCER1AP12319 257 aa5.89□□□□□ -1.47
VBP1-202ENST00000460509 BRAFP15056 766 aa5.89□□□□□ -1.47
VBP1-202ENST00000460509 NPR1P16066 1061 aa5.89□□□□□ -1.47
VBP1-202ENST00000460509 ZKSCAN1P17029 563 aaPredicted RBP5.89□□□□□ -1.47
VBP1-202ENST00000460509 ADAM17P78536 824 aa5.89□□□□□ -1.47
VBP1-202ENST00000460509 HSD11B2P80365 405 aa5.89□□□□□ -1.47
VBP1-202ENST00000460509 PURAQ00577 322 aaKnown RBP5.89□□□□□ -1.47
VBP1-202ENST00000460509 R3HDM1Q15032 1099 aaKnown RBP5.89□□□□□ -1.47
VBP1-202ENST00000460509 SPATS1Q496A3 300 aa5.89□□□□□ -1.47
VBP1-202ENST00000460509 AGAP9Q5VTM2 703 aa5.89□□□□□ -1.47
VBP1-202ENST00000460509 SLC30A10Q6XR72 485 aa5.89□□□□□ -1.47
VBP1-202ENST00000460509 HTR3DQ70Z44 454 aa5.89□□□□□ -1.47
VBP1-202ENST00000460509 PRRT2Q7Z6L0 340 aaPredicted RBP5.89□□□□□ -1.47
VBP1-202ENST00000460509 TMPRSS6Q8IU80 811 aa5.89□□□□□ -1.47
VBP1-202ENST00000460509 ZFPM1Q8IX07 1006 aa5.89□□□□□ -1.47
VBP1-202ENST00000460509 RHOT2Q8IXI1 618 aa5.89□□□□□ -1.47
VBP1-202ENST00000460509 PDPRQ8NCN5 879 aa5.89□□□□□ -1.47
VBP1-202ENST00000460509 PJA1Q8NG27 643 aa5.89□□□□□ -1.47
VBP1-202ENST00000460509 IL31RAQ8NI17 732 aa5.89□□□□□ -1.47
VBP1-202ENST00000460509 PLEKHG4BQ96PX9 1271 aa5.89□□□□□ -1.47
VBP1-202ENST00000460509 PNKPQ96T60 521 aa5.89□□□□□ -1.47
VBP1-202ENST00000460509 PCGF6Q9BYE7 350 aa5.89□□□□□ -1.47
VBP1-202ENST00000460509 LRRC27Q9C0I9 530 aa5.89□□□□□ -1.47
VBP1-202ENST00000460509 RNPEPQ9H4A4 650 aa5.89□□□□□ -1.47
VBP1-202ENST00000460509 KIAA1586Q9HCI6 787 aa5.89□□□□□ -1.47
VBP1-202ENST00000460509 RLIMQ9NVW2 624 aa5.89□□□□□ -1.47
VBP1-202ENST00000460509 PARPBPQ9NWS1 579 aa5.89□□□□□ -1.47
VBP1-202ENST00000460509 AURKAIP1Q9NWT8 199 aaPredicted RBP5.89□□□□□ -1.47
VBP1-202ENST00000460509 OGDHLQ9ULD0 1010 aa5.89□□□□□ -1.47
VBP1-202ENST00000460509 A0A1B0GTW7 788 aa5.88□□□□□ -1.47
VBP1-202ENST00000460509 CCDC194A0A1B0GVG4 234 aa5.88□□□□□ -1.47
VBP1-202ENST00000460509 DIRC3C9JPN6 131 aa5.88□□□□□ -1.47
VBP1-202ENST00000460509 M0QYG6 137 aa5.88□□□□□ -1.47
VBP1-202ENST00000460509 TRIM24O15164 1050 aa5.88□□□□□ -1.47
VBP1-202ENST00000460509 PMM2O15305 246 aa5.88□□□□□ -1.47
VBP1-202ENST00000460509 TBC1D4O60343 1298 aa5.88□□□□□ -1.47
VBP1-202ENST00000460509 GPANK1O95872 356 aa5.88□□□□□ -1.47
VBP1-202ENST00000460509 ANXA1P04083 346 aa5.88□□□□□ -1.47
VBP1-202ENST00000460509 GCSHP23434 173 aa5.88□□□□□ -1.47
VBP1-202ENST00000460509 SUMO3P55854 103 aaPredicted RBP5.88□□□□□ -1.47
VBP1-202ENST00000460509 SEMA5AQ13591 1074 aa5.88□□□□□ -1.47
VBP1-202ENST00000460509 HABP2Q14520 560 aaPredicted RBP5.88□□□□□ -1.47
VBP1-202ENST00000460509 CRB2Q5IJ48 1285 aa5.88□□□□□ -1.47
VBP1-202ENST00000460509 METRNLQ641Q3 311 aa5.88□□□□□ -1.47
VBP1-202ENST00000460509 IL31Q6EBC2 164 aa5.88□□□□□ -1.47
VBP1-202ENST00000460509 CYB5RLQ6IPT4 315 aa5.88□□□□□ -1.47
VBP1-202ENST00000460509 USP37Q86T82 979 aa5.88□□□□□ -1.47
VBP1-202ENST00000460509 PDSS2Q86YH6 399 aa5.88□□□□□ -1.47
VBP1-202ENST00000460509 MAPKAPK5Q8IW41 473 aa5.88□□□□□ -1.47
VBP1-202ENST00000460509 FAM43AQ8N2R8 423 aa5.88□□□□□ -1.47
VBP1-202ENST00000460509 OR6B3Q8NGW1 331 aa5.88□□□□□ -1.47
VBP1-202ENST00000460509 IL17DQ8TAD2 202 aa5.88□□□□□ -1.47
VBP1-202ENST00000460509 SCAMP4Q969E2 229 aa5.88□□□□□ -1.47
VBP1-202ENST00000460509 MRGPRX1Q96LB2 322 aa5.88□□□□□ -1.47
VBP1-202ENST00000460509 SMOQ99835 787 aa5.88□□□□□ -1.47
VBP1-202ENST00000460509 KRTAP9-3Q9BYQ3 159 aa5.88□□□□□ -1.47
VBP1-202ENST00000460509 ZNF768Q9H5H4 540 aaKnown RBP5.88□□□□□ -1.47
VBP1-202ENST00000460509 DDX21Q9NR30 783 aaKnown RBP eCLIP5.88□□□□□ -1.47
VBP1-202ENST00000460509 SACM1LQ9NTJ5 587 aa5.88□□□□□ -1.47
VBP1-202ENST00000460509 KLHL11Q9NVR0 708 aa5.88□□□□□ -1.47
VBP1-202ENST00000460509 CPNE7Q9UBL6 633 aa5.88□□□□□ -1.47
VBP1-202ENST00000460509 SRRDQ9UH36 339 aa5.88□□□□□ -1.47
VBP1-202ENST00000460509 AGAP1Q9UPQ3 857 aa5.88□□□□□ -1.47
VBP1-202ENST00000460509 MAP3K2Q9Y2U5 619 aa5.88□□□□□ -1.47
VBP1-202ENST00000460509 TESMINQ9Y4I5 508 aa5.88□□□□□ -1.47
VBP1-202ENST00000460509 SNX13Q9Y5W8 968 aa5.88□□□□□ -1.47
VBP1-202ENST00000460509 AHRRA9YTQ3 701 aa5.87□□□□□ -1.47
VBP1-202ENST00000460509 POLRMTO00411 1230 aaKnown RBP5.87□□□□□ -1.47
VBP1-202ENST00000460509 PLSCR1O15162 318 aa5.87□□□□□ -1.47
VBP1-202ENST00000460509 NCR1O76036 304 aa5.87□□□□□ -1.47
VBP1-202ENST00000460509 UNC5CO95185 931 aa5.87□□□□□ -1.47
VBP1-202ENST00000460509 KIF20AO95235 890 aa5.87□□□□□ -1.47
VBP1-202ENST00000460509 MYF5P13349 255 aa5.87□□□□□ -1.47
Retrieved 100 of 20,778 RNA–protein pairs in 23.5 ms