RNA–Protein interactions for RNA: ENST00000460408.5

RFC4-211, Transcript of replication factor C subunit 4, humanhuman

TSL 2

Gene RFC4, Length 628 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RFC4-211ENST00000460408 C1QL3Q5VWW1 255 aa4.29□□□□□ -1.72
RFC4-211ENST00000460408 APOA5Q6Q788 366 aa4.29□□□□□ -1.72
RFC4-211ENST00000460408 KRT78Q8N1N4 520 aa4.29□□□□□ -1.72
RFC4-211ENST00000460408 CELF5Q8N6W0 485 aaKnown RBP4.29□□□□□ -1.72
RFC4-211ENST00000460408 MDGA1Q8NFP4 955 aa4.29□□□□□ -1.72
RFC4-211ENST00000460408 OR52N2Q8NGI0 321 aa4.29□□□□□ -1.72
RFC4-211ENST00000460408 IL31RAQ8NI17 732 aa4.29□□□□□ -1.72
RFC4-211ENST00000460408 ANKS1AQ92625 1134 aa4.29□□□□□ -1.72
RFC4-211ENST00000460408 MTFMTQ96DP5 389 aaKnown RBP4.29□□□□□ -1.72
RFC4-211ENST00000460408 MRGPRX1Q96LB2 322 aa4.29□□□□□ -1.72
RFC4-211ENST00000460408 FBXO34Q9NWN3 711 aa4.29□□□□□ -1.72
RFC4-211ENST00000460408 STAP2Q9UGK3 403 aa4.29□□□□□ -1.72
RFC4-211ENST00000460408 TCRBV7S2A1N4TA0A589 114 aa4.28□□□□□ -1.72
RFC4-211ENST00000460408 MYO1FO00160 1098 aa4.28□□□□□ -1.72
RFC4-211ENST00000460408 PMM2O15305 246 aa4.28□□□□□ -1.72
RFC4-211ENST00000460408 MATN4O95460 622 aa4.28□□□□□ -1.72
RFC4-211ENST00000460408 NPR1P16066 1061 aa4.28□□□□□ -1.72
RFC4-211ENST00000460408 PROZP22891 400 aa4.28□□□□□ -1.72
RFC4-211ENST00000460408 PEX2P28328 305 aa4.28□□□□□ -1.72
RFC4-211ENST00000460408 PIK3CGP48736 1102 aa4.28□□□□□ -1.72
RFC4-211ENST00000460408 SCNN1GP51170 649 aa4.28□□□□□ -1.72
RFC4-211ENST00000460408 ATXN1P54253 815 aaKnown RBP4.28□□□□□ -1.72
RFC4-211ENST00000460408 TOB2Q14106 344 aaPredicted RBP4.28□□□□□ -1.72
RFC4-211ENST00000460408 POLD3Q15054 466 aaPredicted RBP4.28□□□□□ -1.72
RFC4-211ENST00000460408 ELAVL1Q15717 326 aaKnown RBP4.28□□□□□ -1.72
RFC4-211ENST00000460408 ATP2B3Q16720 1220 aa4.28□□□□□ -1.72
RFC4-211ENST00000460408 SYCP2LQ5T4T6 812 aa4.28□□□□□ -1.72
RFC4-211ENST00000460408 ZNF529Q6P280 563 aa4.28□□□□□ -1.72
RFC4-211ENST00000460408 DRICH1Q6PGQ1 229 aaPredicted RBP4.28□□□□□ -1.72
RFC4-211ENST00000460408 DARS2Q6PI48 645 aaKnown RBP4.28□□□□□ -1.72
RFC4-211ENST00000460408 HTR3DQ70Z44 454 aa4.28□□□□□ -1.72
RFC4-211ENST00000460408 MRGPREQ86SM8 312 aa4.28□□□□□ -1.72
RFC4-211ENST00000460408 FAM83AQ86UY5 434 aa4.28□□□□□ -1.72
RFC4-211ENST00000460408 ELOA2Q8IYF1 753 aaPredicted RBP4.28□□□□□ -1.72
RFC4-211ENST00000460408 SH2D3CQ8N5H7 860 aa4.28□□□□□ -1.72
RFC4-211ENST00000460408 LRTOMTQ8WZ04 291 aa4.28□□□□□ -1.72
RFC4-211ENST00000460408 ST8SIA2Q92186 375 aa4.28□□□□□ -1.72
RFC4-211ENST00000460408 MIEF2Q96C03 454 aa4.28□□□□□ -1.72
RFC4-211ENST00000460408 C1orf43Q9BWL3 253 aa4.28□□□□□ -1.72
RFC4-211ENST00000460408 NAA15Q9BXJ9 866 aaKnown RBP4.28□□□□□ -1.72
RFC4-211ENST00000460408 FAM50BQ9Y247 325 aa4.28□□□□□ -1.72
RFC4-211ENST00000460408 PCDHGB6Q9Y5F9 930 aa4.28□□□□□ -1.72
RFC4-211ENST00000460408 PCDHA1Q9Y5I3 950 aa4.28□□□□□ -1.72
RFC4-211ENST00000460408 PHGDHO43175 533 aaKnown RBP4.27□□□□□ -1.73
RFC4-211ENST00000460408 SLC43A1O75387 559 aa4.27□□□□□ -1.73
RFC4-211ENST00000460408 IPO13O94829 963 aaKnown RBP4.27□□□□□ -1.73
RFC4-211ENST00000460408 HAUS5O94927 633 aa4.27□□□□□ -1.73
RFC4-211ENST00000460408 AHSGP02765 367 aa4.27□□□□□ -1.73
RFC4-211ENST00000460408 GCP02774 474 aa4.27□□□□□ -1.73
RFC4-211ENST00000460408 MTHFD1P11586 935 aaKnown RBP4.27□□□□□ -1.73
RFC4-211ENST00000460408 MYF5P13349 255 aa4.27□□□□□ -1.73
RFC4-211ENST00000460408 GNAT2P19087 354 aa4.27□□□□□ -1.73
RFC4-211ENST00000460408 SMARCA1P28370 1054 aa4.27□□□□□ -1.73
RFC4-211ENST00000460408 PTGS2P35354 604 aa4.27□□□□□ -1.73
RFC4-211ENST00000460408 ARFIP2P53365 341 aa4.27□□□□□ -1.73
RFC4-211ENST00000460408 RABGGTBP53611 331 aa4.27□□□□□ -1.73
RFC4-211ENST00000460408 RHBDL3P58872 404 aa4.27□□□□□ -1.73
RFC4-211ENST00000460408 CREMQ03060 361 aa4.27□□□□□ -1.73
RFC4-211ENST00000460408 FSTL1Q12841 308 aa4.27□□□□□ -1.73
RFC4-211ENST00000460408 UBXN2BQ14CS0 331 aa4.27□□□□□ -1.73
RFC4-211ENST00000460408 CCDC93Q567U6 631 aa4.27□□□□□ -1.73
RFC4-211ENST00000460408 DCAF17Q5H9S7 520 aaPredicted RBP4.27□□□□□ -1.73
RFC4-211ENST00000460408 NAIF1Q69YI7 327 aaPredicted RBP4.27□□□□□ -1.73
RFC4-211ENST00000460408 IL31Q6EBC2 164 aa4.27□□□□□ -1.73
RFC4-211ENST00000460408 Q6ZRM9 215 aa4.27□□□□□ -1.73
RFC4-211ENST00000460408 UBE3BQ7Z3V4 1068 aa4.27□□□□□ -1.73
RFC4-211ENST00000460408 ZFP28Q8NHY6 868 aa4.27□□□□□ -1.73
RFC4-211ENST00000460408 BRIX1Q8TDN6 353 aaKnown RBP4.27□□□□□ -1.73
RFC4-211ENST00000460408 TFAP2CQ92754 450 aa4.27□□□□□ -1.73
RFC4-211ENST00000460408 NAF1Q96HR8 494 aaKnown RBP4.27□□□□□ -1.73
RFC4-211ENST00000460408 CPPED1Q9BRF8 314 aaPredicted RBP4.27□□□□□ -1.73
RFC4-211ENST00000460408 EPC1Q9H2F5 836 aa4.27□□□□□ -1.73
RFC4-211ENST00000460408 JKAMPQ9P055 326 aa4.27□□□□□ -1.73
RFC4-211ENST00000460408 USP25Q9UHP3 1055 aa4.27□□□□□ -1.73
RFC4-211ENST00000460408 ZDHHC8Q9ULC8 765 aa4.27□□□□□ -1.73
RFC4-211ENST00000460408 PCDHA6Q9UN73 950 aa4.27□□□□□ -1.73
RFC4-211ENST00000460408 KLRG2A4D1S0 409 aaPredicted RBP4.26□□□□□ -1.73
RFC4-211ENST00000460408 CFAP69A5D8W1 941 aa4.26□□□□□ -1.73
RFC4-211ENST00000460408 PRR5-ARHGAP8B1AHC4 643 aa4.26□□□□□ -1.73
RFC4-211ENST00000460408 KIAA0391O15091 583 aaKnown RBP4.26□□□□□ -1.73
RFC4-211ENST00000460408 TBX3O15119 743 aa4.26□□□□□ -1.73
RFC4-211ENST00000460408 RPS6KA4O75676 772 aa4.26□□□□□ -1.73
RFC4-211ENST00000460408 RHOBTB3O94955 611 aa4.26□□□□□ -1.73
RFC4-211ENST00000460408 POMCP01189 267 aa4.26□□□□□ -1.73
RFC4-211ENST00000460408 LMNAP02545 664 aaKnown RBP4.26□□□□□ -1.73
RFC4-211ENST00000460408 ALAS1P13196 640 aa4.26□□□□□ -1.73
RFC4-211ENST00000460408 TM4SF4P48230 202 aa4.26□□□□□ -1.73
RFC4-211ENST00000460408 MAN2A2P49641 1150 aa4.26□□□□□ -1.73
RFC4-211ENST00000460408 NEK3P51956 506 aa4.26□□□□□ -1.73
RFC4-211ENST00000460408 RAP2BP61225 183 aa4.26□□□□□ -1.73
RFC4-211ENST00000460408 PICALMQ13492 652 aa4.26□□□□□ -1.73
RFC4-211ENST00000460408 CNGB1Q14028 1251 aaPredicted RBP4.26□□□□□ -1.73
RFC4-211ENST00000460408 KIF22Q14807 665 aa4.26□□□□□ -1.73
RFC4-211ENST00000460408 VPS72Q15906 364 aa4.26□□□□□ -1.73
RFC4-211ENST00000460408 ATXN7L2Q5T6C5 722 aaPredicted RBP4.26□□□□□ -1.73
RFC4-211ENST00000460408 METRNLQ641Q3 311 aa4.26□□□□□ -1.73
RFC4-211ENST00000460408 ZNF365Q70YC5 407 aa4.26□□□□□ -1.73
RFC4-211ENST00000460408 C11orf96Q7Z7L8 435 aa4.26□□□□□ -1.73
RFC4-211ENST00000460408 PRIMA1Q86XR5 153 aa4.26□□□□□ -1.73
RFC4-211ENST00000460408 PDSS2Q86YH6 399 aa4.26□□□□□ -1.73
Retrieved 100 of 20,778 RNA–protein pairs in 21.2 ms