RNA–Protein interactions for RNA: ENST00000460162.1

PTPN4-207, Transcript of protein tyrosine phosphatase, non-receptor type 4, humanhuman

TSL 4

Gene PTPN4, Length 623 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPN4-207ENST00000460162 PRR23AA6NEV1 266 aa24.72■■□□□ 1.55
PTPN4-207ENST00000460162 OR6C75A6NL08 312 aa24.72■■□□□ 1.55
PTPN4-207ENST00000460162 TYMPP19971 482 aa24.72■■□□□ 1.55
PTPN4-207ENST00000460162 PRKCQQ04759 706 aa24.72■■□□□ 1.55
PTPN4-207ENST00000460162 MLF2Q15773 248 aaPredicted RBP24.72■■□□□ 1.55
PTPN4-207ENST00000460162 JADE1Q6IE81 842 aa24.72■■□□□ 1.55
PTPN4-207ENST00000460162 IQCEQ6IPM2 695 aa24.72■■□□□ 1.55
PTPN4-207ENST00000460162 DSTYKQ6XUX3 929 aa24.72■■□□□ 1.55
PTPN4-207ENST00000460162 SFR1Q86XK3 245 aa24.72■■□□□ 1.55
PTPN4-207ENST00000460162 MCRS1Q96EZ8 462 aa24.72■■□□□ 1.55
PTPN4-207ENST00000460162 DLGAP2Q9P1A6 1054 aa24.72■■□□□ 1.55
PTPN4-207ENST00000460162 SEL1LQ9UBV2 794 aa24.72■■□□□ 1.55
PTPN4-207ENST00000460162 STYXL1Q9Y6J8 313 aa24.72■■□□□ 1.55
PTPN4-207ENST00000460162 DMDP11532 3685 aa24.71■■□□□ 1.55
PTPN4-207ENST00000460162 NFICP08651 508 aa24.71■■□□□ 1.55
PTPN4-207ENST00000460162 GUCY2FP51841 1108 aa24.71■■□□□ 1.55
PTPN4-207ENST00000460162 TWF1Q12792 350 aa24.71■■□□□ 1.55
PTPN4-207ENST00000460162 TMEM132DQ14C87 1099 aa24.71■■□□□ 1.55
PTPN4-207ENST00000460162 ZC2HC1CQ53FD0 456 aaPredicted RBP24.71■■□□□ 1.55
PTPN4-207ENST00000460162 CYP4A22Q5TCH4 519 aa24.71■■□□□ 1.55
PTPN4-207ENST00000460162 RNF19BQ6ZMZ0 732 aa24.71■■□□□ 1.55
PTPN4-207ENST00000460162 FRMD5Q7Z6J6 570 aa24.71■■□□□ 1.55
PTPN4-207ENST00000460162 FAM212AQ96EL1 285 aa24.71■■□□□ 1.55
PTPN4-207ENST00000460162 DDX23Q9BUQ8 820 aaKnown RBP24.71■■□□□ 1.55
PTPN4-207ENST00000460162 ASB7Q9H672 318 aa24.71■■□□□ 1.55
PTPN4-207ENST00000460162 C2CD2Q9Y426 696 aa24.71■■□□□ 1.55
PTPN4-207ENST00000460162 YIPF1Q9Y548 306 aa24.71■■□□□ 1.55
PTPN4-207ENST00000460162 TIMM13Q9Y5L4 95 aaPredicted RBP24.71■■□□□ 1.55
PTPN4-207ENST00000460162 PATJQ8NI35 1801 aa24.7■■□□□ 1.55
PTPN4-207ENST00000460162 COL4A3Q01955 1670 aa24.7■■□□□ 1.54
PTPN4-207ENST00000460162 ANKRD63C9JTQ0 380 aa24.7■■□□□ 1.54
PTPN4-207ENST00000460162 PPP1R37O75864 691 aa24.7■■□□□ 1.54
PTPN4-207ENST00000460162 ODC1P11926 461 aa24.7■■□□□ 1.54
PTPN4-207ENST00000460162 EPHA5P54756 1037 aa24.7■■□□□ 1.54
PTPN4-207ENST00000460162 POU5F1Q01860 360 aaKnown RBP24.7■■□□□ 1.54
PTPN4-207ENST00000460162 PLD1Q13393 1074 aa24.7■■□□□ 1.54
PTPN4-207ENST00000460162 RRAGBQ5VZM2 374 aa24.7■■□□□ 1.54
PTPN4-207ENST00000460162 ADALQ6DHV7 355 aa24.7■■□□□ 1.54
PTPN4-207ENST00000460162 OVOS1Q6IE37 1185 aa24.7■■□□□ 1.54
PTPN4-207ENST00000460162 FAM173BQ6P4H8 233 aa24.7■■□□□ 1.54
PTPN4-207ENST00000460162 DYMQ7RTS9 669 aa24.7■■□□□ 1.54
PTPN4-207ENST00000460162 ASCL5Q7RTU5 278 aa24.7■■□□□ 1.54
PTPN4-207ENST00000460162 ZNF720Q7Z2F6 126 aa24.7■■□□□ 1.54
PTPN4-207ENST00000460162 NKD2Q969F2 451 aaPredicted RBP24.7■■□□□ 1.54
PTPN4-207ENST00000460162 ELSPBP1Q96BH3 223 aa24.7■■□□□ 1.54
PTPN4-207ENST00000460162 ZNF512Q96ME7 567 aaPredicted RBP24.7■■□□□ 1.54
PTPN4-207ENST00000460162 FOXQ1Q9C009 403 aa24.7■■□□□ 1.54
PTPN4-207ENST00000460162 ASAH2Q9NR71 780 aa24.7■■□□□ 1.54
PTPN4-207ENST00000460162 AGO2Q9UKV8 859 aaKnown RBP24.7■■□□□ 1.54
PTPN4-207ENST00000460162 TCHHQ07283 1943 aa24.69■■□□□ 1.54
PTPN4-207ENST00000460162 TISP43B9A030 160 aa24.69■■□□□ 1.54
PTPN4-207ENST00000460162 PPEF2O14830 753 aa24.69■■□□□ 1.54
PTPN4-207ENST00000460162 DCNP07585 359 aaKnown RBP24.69■■□□□ 1.54
PTPN4-207ENST00000460162 GAP43P17677 238 aa24.69■■□□□ 1.54
PTPN4-207ENST00000460162 FCARP24071 287 aa24.69■■□□□ 1.54
PTPN4-207ENST00000460162 CCR2P41597 374 aa24.69■■□□□ 1.54
PTPN4-207ENST00000460162 LILRA4P59901 499 aa24.69■■□□□ 1.54
PTPN4-207ENST00000460162 SNW1Q13573 536 aaKnown RBP24.69■■□□□ 1.54
PTPN4-207ENST00000460162 MYBPC2Q14324 1141 aa24.69■■□□□ 1.54
PTPN4-207ENST00000460162 C9orf57Q5W0N0 161 aa24.69■■□□□ 1.54
PTPN4-207ENST00000460162 TCEAL4Q96EI5 215 aa24.69■■□□□ 1.54
PTPN4-207ENST00000460162 CEP72Q9P209 647 aa24.69■■□□□ 1.54
PTPN4-207ENST00000460162 COL4A2P08572 1712 aa24.69■■□□□ 1.54
PTPN4-207ENST00000460162 CFAP54Q96N23 3096 aa24.68■■□□□ 1.54
PTPN4-207ENST00000460162 SCN1AP35498 2009 aa24.68■■□□□ 1.54
PTPN4-207ENST00000460162 KANSL1LA0AUZ9 987 aa24.68■■□□□ 1.54
PTPN4-207ENST00000460162 ACOT2P49753 483 aa24.68■■□□□ 1.54
PTPN4-207ENST00000460162 GPR17Q13304 367 aa24.68■■□□□ 1.54
PTPN4-207ENST00000460162 SLC44A4Q53GD3 710 aa24.68■■□□□ 1.54
PTPN4-207ENST00000460162 POTEHQ6S545 545 aa24.68■■□□□ 1.54
PTPN4-207ENST00000460162 CCDC73Q6ZRK6 1079 aa24.68■■□□□ 1.54
PTPN4-207ENST00000460162 SV2BQ7L1I2 683 aa24.68■■□□□ 1.54
PTPN4-207ENST00000460162 CLIC6Q96NY7 704 aa24.68■■□□□ 1.54
PTPN4-207ENST00000460162 USP28Q96RU2 1077 aa24.68■■□□□ 1.54
PTPN4-207ENST00000460162 ZSCAN16Q9H4T2 348 aaPredicted RBP24.68■■□□□ 1.54
PTPN4-207ENST00000460162 OLFML3Q9NRN5 406 aa24.68■■□□□ 1.54
PTPN4-207ENST00000460162 MTMR6Q9Y217 621 aa24.68■■□□□ 1.54
PTPN4-207ENST00000460162 ANO9A1A5B4 782 aa24.67■■□□□ 1.54
PTPN4-207ENST00000460162 K7ELQ4 463 aaPredicted RBP24.67■■□□□ 1.54
PTPN4-207ENST00000460162 PIRO00625 290 aa24.67■■□□□ 1.54
PTPN4-207ENST00000460162 VNN2O95498 520 aa24.67■■□□□ 1.54
PTPN4-207ENST00000460162 OR4Q2P0C623 313 aa24.67■■□□□ 1.54
PTPN4-207ENST00000460162 CEBPZQ03701 1054 aaKnown RBP24.67■■□□□ 1.54
PTPN4-207ENST00000460162 DNASE1L2Q92874 299 aa24.67■■□□□ 1.54
PTPN4-207ENST00000460162 DNAJC19Q96DA6 116 aa24.67■■□□□ 1.54
PTPN4-207ENST00000460162 SENP8Q96LD8 212 aa24.67■■□□□ 1.54
PTPN4-207ENST00000460162 ASB16Q96NS5 453 aa24.67■■□□□ 1.54
PTPN4-207ENST00000460162 PGLYRP2Q96PD5 576 aa24.67■■□□□ 1.54
PTPN4-207ENST00000460162 STRA6Q9BX79 667 aa24.67■■□□□ 1.54
PTPN4-207ENST00000460162 BACH2Q9BYV9 841 aa24.67■■□□□ 1.54
PTPN4-207ENST00000460162 OSBPL6Q9BZF3 934 aa24.67■■□□□ 1.54
PTPN4-207ENST00000460162 MRPL44Q9H9J2 332 aaKnown RBP24.67■■□□□ 1.54
PTPN4-207ENST00000460162 ZFP14Q9HCL3 533 aa24.67■■□□□ 1.54
PTPN4-207ENST00000460162 EXOC7Q9UPT5 735 aa24.67■■□□□ 1.54
PTPN4-207ENST00000460162 FANCMQ8IYD8 2048 aa24.67■■□□□ 1.54
PTPN4-207ENST00000460162 FAM186AA6NE01 2351 aa24.67■■□□□ 1.54
PTPN4-207ENST00000460162 RIF1Q5UIP0 2472 aaKnown RBP24.67■■□□□ 1.54
PTPN4-207ENST00000460162 MYMKA6NI61 221 aa24.66■■□□□ 1.54
PTPN4-207ENST00000460162 CYP11A1P05108 521 aa24.66■■□□□ 1.54
PTPN4-207ENST00000460162 SLC39A14Q15043 492 aa24.66■■□□□ 1.54
Retrieved 100 of 20,778 RNA–protein pairs in 22.1 ms