RNA–Protein interactions for RNA: ENST00000460064.1

CCDC50-203, Transcript of coiled-coil domain containing 50, humanhuman

TSL 2

Gene CCDC50, Length 420 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC50-203ENST00000460064 NCK2O43639 380 aa6.68□□□□□ -1.34
CCDC50-203ENST00000460064 ABHD16AO95870 558 aa6.68□□□□□ -1.34
CCDC50-203ENST00000460064 SLC6A2P23975 617 aa6.68□□□□□ -1.34
CCDC50-203ENST00000460064 MGAT1P26572 445 aa6.68□□□□□ -1.34
CCDC50-203ENST00000460064 MXRA7P84157 204 aa6.68□□□□□ -1.34
CCDC50-203ENST00000460064 STK3Q13188 491 aa6.68□□□□□ -1.34
CCDC50-203ENST00000460064 CTBP1Q13363 440 aa6.68□□□□□ -1.34
CCDC50-203ENST00000460064 CSRP2Q16527 193 aa6.68□□□□□ -1.34
CCDC50-203ENST00000460064 TBC1D10BQ4KMP7 808 aaPredicted RBP6.68□□□□□ -1.34
CCDC50-203ENST00000460064 SLC44A4Q53GD3 710 aa6.68□□□□□ -1.34
CCDC50-203ENST00000460064 IZUMO3Q5VZ72 239 aa6.68□□□□□ -1.34
CCDC50-203ENST00000460064 TCTN3Q6NUS6 607 aa6.68□□□□□ -1.34
CCDC50-203ENST00000460064 TSHZ1Q6ZSZ6 1077 aa6.68□□□□□ -1.34
CCDC50-203ENST00000460064 USP37Q86T82 979 aa6.68□□□□□ -1.34
CCDC50-203ENST00000460064 C1QL4Q86Z23 238 aa6.68□□□□□ -1.34
CCDC50-203ENST00000460064 FUKQ8N0W3 1084 aa6.68□□□□□ -1.34
CCDC50-203ENST00000460064 MB21D1Q8N884 522 aa6.68□□□□□ -1.34
CCDC50-203ENST00000460064 MDGA1Q8NFP4 955 aa6.68□□□□□ -1.34
CCDC50-203ENST00000460064 NMD3Q96D46 503 aaKnown RBP6.68□□□□□ -1.34
CCDC50-203ENST00000460064 IMPG2Q9BZV3 1241 aa6.68□□□□□ -1.34
CCDC50-203ENST00000460064 VPS11Q9H270 941 aa6.68□□□□□ -1.34
CCDC50-203ENST00000460064 CERS4Q9HA82 394 aa6.68□□□□□ -1.34
CCDC50-203ENST00000460064 COL20A1Q9P218 1284 aa6.68□□□□□ -1.34
CCDC50-203ENST00000460064 MYO1CO00159 1063 aa6.67□□□□□ -1.34
CCDC50-203ENST00000460064 RAD17O75943 681 aa6.67□□□□□ -1.34
CCDC50-203ENST00000460064 ITGB1P05556 798 aa6.67□□□□□ -1.34
CCDC50-203ENST00000460064 ZSCAN22P10073 491 aaPredicted RBP6.67□□□□□ -1.34
CCDC50-203ENST00000460064 ZNF135P52742 658 aaPredicted RBP6.67□□□□□ -1.34
CCDC50-203ENST00000460064 GRAMD1BQ3KR37 738 aa6.67□□□□□ -1.34
CCDC50-203ENST00000460064 AMOTQ4VCS5 1084 aa6.67□□□□□ -1.34
CCDC50-203ENST00000460064 UBXN11Q5T124 520 aa6.67□□□□□ -1.34
CCDC50-203ENST00000460064 LMBRD2Q68DH5 695 aaPredicted RBP6.67□□□□□ -1.34
CCDC50-203ENST00000460064 SGMS1Q86VZ5 419 aa6.67□□□□□ -1.34
CCDC50-203ENST00000460064 MYLK4Q86YV6 388 aaPredicted RBP6.67□□□□□ -1.34
CCDC50-203ENST00000460064 DDX17Q92841 729 aaKnown RBP6.67□□□□□ -1.34
CCDC50-203ENST00000460064 MSLNLQ96KJ4 702 aa6.67□□□□□ -1.34
CCDC50-203ENST00000460064 CPEB1Q9BZB8 566 aaKnown RBP6.67□□□□□ -1.34
CCDC50-203ENST00000460064 DPH1Q9BZG8 443 aa6.67□□□□□ -1.34
CCDC50-203ENST00000460064 ADAM7Q9H2U9 754 aa6.67□□□□□ -1.34
CCDC50-203ENST00000460064 SMURF2Q9HAU4 748 aa6.67□□□□□ -1.34
CCDC50-203ENST00000460064 GPR35Q9HC97 309 aa6.67□□□□□ -1.34
CCDC50-203ENST00000460064 PTPRHQ9HD43 1115 aa6.67□□□□□ -1.34
CCDC50-203ENST00000460064 TRMT13Q9NUP7 481 aaKnown RBP6.67□□□□□ -1.34
CCDC50-203ENST00000460064 PADI4Q9UM07 663 aa6.67□□□□□ -1.34
CCDC50-203ENST00000460064 LRCH1Q9Y2L9 728 aa6.67□□□□□ -1.34
CCDC50-203ENST00000460064 OTOL1A6NHN0 477 aaPredicted RBP6.66□□□□□ -1.34
CCDC50-203ENST00000460064 APOL1O14791 398 aa6.66□□□□□ -1.34
CCDC50-203ENST00000460064 UNC5CO95185 931 aa6.66□□□□□ -1.34
CCDC50-203ENST00000460064 PLATP00750 562 aa6.66□□□□□ -1.34
CCDC50-203ENST00000460064 ABCB4P21439 1286 aa6.66□□□□□ -1.34
CCDC50-203ENST00000460064 RPS16P62249 146 aaKnown RBP6.66□□□□□ -1.34
CCDC50-203ENST00000460064 HHEXQ03014 270 aa6.66□□□□□ -1.34
CCDC50-203ENST00000460064 RAB32Q13637 225 aa6.66□□□□□ -1.34
CCDC50-203ENST00000460064 DHX8Q14562 1220 aaKnown RBP6.66□□□□□ -1.34
CCDC50-203ENST00000460064 CRB2Q5IJ48 1285 aa6.66□□□□□ -1.34
CCDC50-203ENST00000460064 METTL24Q5JXM2 366 aa6.66□□□□□ -1.34
CCDC50-203ENST00000460064 FAM83BQ5T0W9 1011 aa6.66□□□□□ -1.34
CCDC50-203ENST00000460064 KLHDC7AQ5VTJ3 777 aa6.66□□□□□ -1.34
CCDC50-203ENST00000460064 HIBCHQ6NVY1 386 aaPredicted RBP6.66□□□□□ -1.34
CCDC50-203ENST00000460064 DRICH1Q6PGQ1 229 aaPredicted RBP6.66□□□□□ -1.34
CCDC50-203ENST00000460064 GLB1LQ6UWU2 654 aa6.66□□□□□ -1.34
CCDC50-203ENST00000460064 MPP5Q8N3R9 675 aa6.66□□□□□ -1.34
CCDC50-203ENST00000460064 SLC15A4Q8N697 577 aa6.66□□□□□ -1.34
CCDC50-203ENST00000460064 ATP11CQ8NB49 1132 aa6.66□□□□□ -1.34
CCDC50-203ENST00000460064 TMIEQ8NEW7 156 aa6.66□□□□□ -1.34
CCDC50-203ENST00000460064 OR10H5Q8NGA6 315 aa6.66□□□□□ -1.34
CCDC50-203ENST00000460064 OR52N2Q8NGI0 321 aa6.66□□□□□ -1.34
CCDC50-203ENST00000460064 ATXN2LQ8WWM7 1075 aaKnown RBP6.66□□□□□ -1.34
CCDC50-203ENST00000460064 BRI3BPQ8WY22 251 aa6.66□□□□□ -1.34
CCDC50-203ENST00000460064 MAML1Q92585 1016 aa6.66□□□□□ -1.34
CCDC50-203ENST00000460064 SCAMP4Q969E2 229 aa6.66□□□□□ -1.34
CCDC50-203ENST00000460064 KIAA1191Q96A73 305 aa6.66□□□□□ -1.34
CCDC50-203ENST00000460064 MIEF2Q96C03 454 aa6.66□□□□□ -1.34
CCDC50-203ENST00000460064 SELENOOQ9BVL4 669 aa6.66□□□□□ -1.34
CCDC50-203ENST00000460064 BRIP1Q9BX63 1249 aa6.66□□□□□ -1.34
CCDC50-203ENST00000460064 ZNF518BQ9C0D4 1074 aa6.66□□□□□ -1.34
CCDC50-203ENST00000460064 ZCCHC4Q9H5U6 513 aa6.66□□□□□ -1.34
CCDC50-203ENST00000460064 PPCSQ9HAB8 311 aa6.66□□□□□ -1.34
CCDC50-203ENST00000460064 GPRC5BQ9NZH0 403 aa6.66□□□□□ -1.34
CCDC50-203ENST00000460064 AGAP1Q9UPQ3 857 aa6.66□□□□□ -1.34
CCDC50-203ENST00000460064 PLEKHM1Q9Y4G2 1056 aa6.66□□□□□ -1.34
CCDC50-203ENST00000460064 TRIM43BA6NCK2 446 aa6.65□□□□□ -1.34
CCDC50-203ENST00000460064 FOXS1O43638 330 aa6.65□□□□□ -1.34
CCDC50-203ENST00000460064 DNAJB5O75953 348 aa6.65□□□□□ -1.34
CCDC50-203ENST00000460064 FGF18O76093 207 aa6.65□□□□□ -1.34
CCDC50-203ENST00000460064 PRSS23O95084 383 aa6.65□□□□□ -1.34
CCDC50-203ENST00000460064 GRPP07492 148 aa6.65□□□□□ -1.34
CCDC50-203ENST00000460064 CKBP12277 381 aa6.65□□□□□ -1.34
CCDC50-203ENST00000460064 TSHRP16473 764 aa6.65□□□□□ -1.34
CCDC50-203ENST00000460064 CHN2P52757 468 aa6.65□□□□□ -1.34
CCDC50-203ENST00000460064 POU6F2P78424 691 aaPredicted RBP6.65□□□□□ -1.34
CCDC50-203ENST00000460064 ZRSR2Q15696 482 aaKnown RBP6.65□□□□□ -1.34
CCDC50-203ENST00000460064 ARL13BQ3SXY8 428 aa6.65□□□□□ -1.34
CCDC50-203ENST00000460064 LIMS2Q7Z4I7 341 aa6.65□□□□□ -1.34
CCDC50-203ENST00000460064 POLNQ7Z5Q5 900 aa6.65□□□□□ -1.34
CCDC50-203ENST00000460064 CIR1Q86X95 450 aaPredicted RBP6.65□□□□□ -1.34
CCDC50-203ENST00000460064 ANKRD35Q8N283 1001 aa6.65□□□□□ -1.34
CCDC50-203ENST00000460064 DNAJC5GQ8N7S2 189 aa6.65□□□□□ -1.34
CCDC50-203ENST00000460064 RNF152Q8N8N0 203 aa6.65□□□□□ -1.34
CCDC50-203ENST00000460064 POF1BQ8WVV4 589 aa6.65□□□□□ -1.34
Retrieved 100 of 20,778 RNA–protein pairs in 27 ms