RNA–Protein interactions for RNA: ENST00000460035.1

CCDC12-204, Transcript of coiled-coil domain containing 12, humanhuman

TSL 2

Gene CCDC12, Length 572 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC12-204ENST00000460035 SPTLC1O15269 473 aa11.7□□□□□ -0.54
CCDC12-204ENST00000460035 TRIM49P0CI25 452 aa11.7□□□□□ -0.54
CCDC12-204ENST00000460035 TRIM49CP0CI26 452 aa11.7□□□□□ -0.54
CCDC12-204ENST00000460035 FGFR3P22607 806 aa11.7□□□□□ -0.54
CCDC12-204ENST00000460035 KLRC2P26717 231 aa11.7□□□□□ -0.54
CCDC12-204ENST00000460035 ERCC5P28715 1186 aaPredicted RBP11.7□□□□□ -0.54
CCDC12-204ENST00000460035 TKTP29401 623 aaKnown RBP11.7□□□□□ -0.54
CCDC12-204ENST00000460035 PNPLA4P41247 253 aa11.7□□□□□ -0.54
CCDC12-204ENST00000460035 GCLMP48507 274 aa11.7□□□□□ -0.54
CCDC12-204ENST00000460035 NRIP1P48552 1158 aa11.7□□□□□ -0.54
CCDC12-204ENST00000460035 DSG1Q02413 1049 aa11.7□□□□□ -0.54
CCDC12-204ENST00000460035 MYO1EQ12965 1108 aa11.7□□□□□ -0.54
CCDC12-204ENST00000460035 PTPN14Q15678 1187 aa11.7□□□□□ -0.54
CCDC12-204ENST00000460035 STX1AQ16623 288 aa11.7□□□□□ -0.54
CCDC12-204ENST00000460035 SV2CQ496J9 727 aa11.7□□□□□ -0.54
CCDC12-204ENST00000460035 DCAF17Q5H9S7 520 aaPredicted RBP11.7□□□□□ -0.54
CCDC12-204ENST00000460035 RTP2Q5QGT7 225 aa11.7□□□□□ -0.54
CCDC12-204ENST00000460035 KIAA0319Q5VV43 1072 aa11.7□□□□□ -0.54
CCDC12-204ENST00000460035 SCARA3Q6AZY7 606 aa11.7□□□□□ -0.54
CCDC12-204ENST00000460035 PRSS55Q6UWB4 352 aaPredicted RBP11.7□□□□□ -0.54
CCDC12-204ENST00000460035 PDZRN4Q6ZMN7 1036 aaPredicted RBP11.7□□□□□ -0.54
CCDC12-204ENST00000460035 APPL2Q8NEU8 664 aa11.7□□□□□ -0.54
CCDC12-204ENST00000460035 MAFAQ8NHW3 353 aaPredicted RBP11.7□□□□□ -0.54
CCDC12-204ENST00000460035 CXorf38Q8TB03 319 aa11.7□□□□□ -0.54
CCDC12-204ENST00000460035 BORCS6Q96GS4 357 aa11.7□□□□□ -0.54
CCDC12-204ENST00000460035 HPDLQ96IR7 371 aa11.7□□□□□ -0.54
CCDC12-204ENST00000460035 SUSD3Q96L08 255 aa11.7□□□□□ -0.54
CCDC12-204ENST00000460035 SENP8Q96LD8 212 aa11.7□□□□□ -0.54
CCDC12-204ENST00000460035 ZNF560Q96MR9 790 aa11.7□□□□□ -0.54
CCDC12-204ENST00000460035 EMILIN2Q9BXX0 1053 aa11.7□□□□□ -0.54
CCDC12-204ENST00000460035 METTL14Q9HCE5 456 aaKnown RBP11.7□□□□□ -0.54
CCDC12-204ENST00000460035 CHST7Q9NS84 486 aa11.7□□□□□ -0.54
CCDC12-204ENST00000460035 SIX4Q9UIU6 781 aa11.7□□□□□ -0.54
CCDC12-204ENST00000460035 TIMM13Q9Y5L4 95 aaPredicted RBP11.7□□□□□ -0.54
CCDC12-204ENST00000460035 NCOR1O75376 2440 aa11.7□□□□□ -0.54
CCDC12-204ENST00000460035 ZNF638Q14966 1978 aaKnown RBP11.69□□□□□ -0.54
CCDC12-204ENST00000460035 GREB1Q4ZG55 1949 aa11.69□□□□□ -0.54
CCDC12-204ENST00000460035 DENND4CQ5VZ89 1909 aa11.69□□□□□ -0.54
CCDC12-204ENST00000460035 KPNA7A9QM74 516 aa11.69□□□□□ -0.54
CCDC12-204ENST00000460035 CYB561D2O14569 222 aa11.69□□□□□ -0.54
CCDC12-204ENST00000460035 SYN3O14994 580 aa11.69□□□□□ -0.54
CCDC12-204ENST00000460035 STX10O60499 249 aa11.69□□□□□ -0.54
CCDC12-204ENST00000460035 GNA14O95837 355 aa11.69□□□□□ -0.54
CCDC12-204ENST00000460035 CST3P01034 146 aaPredicted RBP11.69□□□□□ -0.54
CCDC12-204ENST00000460035 C4BPAP04003 597 aaKnown RBP11.69□□□□□ -0.54
CCDC12-204ENST00000460035 CCDC192P0DO97 292 aa11.69□□□□□ -0.54
CCDC12-204ENST00000460035 RPL17P18621 184 aaKnown RBP11.69□□□□□ -0.54
CCDC12-204ENST00000460035 TYRO3Q06418 890 aa11.69□□□□□ -0.54
CCDC12-204ENST00000460035 C1orf220Q5T0J3 134 aa11.69□□□□□ -0.54
CCDC12-204ENST00000460035 PDXDC1Q6P996 788 aa11.69□□□□□ -0.54
CCDC12-204ENST00000460035 SV2AQ7L0J3 742 aa11.69□□□□□ -0.54
CCDC12-204ENST00000460035 FRMD5Q7Z6J6 570 aa11.69□□□□□ -0.54
CCDC12-204ENST00000460035 GLYCTKQ8IVS8 523 aa11.69□□□□□ -0.54
CCDC12-204ENST00000460035 LRRC52Q8N7C0 313 aa11.69□□□□□ -0.54
CCDC12-204ENST00000460035 KLHL5Q96PQ7 755 aa11.69□□□□□ -0.54
CCDC12-204ENST00000460035 MED15Q96RN5 788 aa11.69□□□□□ -0.54
CCDC12-204ENST00000460035 PCDHB8Q9UN66 801 aa11.69□□□□□ -0.54
CCDC12-204ENST00000460035 REV3LO60673 3130 aa11.68□□□□□ -0.54
CCDC12-204ENST00000460035 ARHGEF37A1IGU5 675 aa11.68□□□□□ -0.54
CCDC12-204ENST00000460035 SYCE3A1L190 88 aa11.68□□□□□ -0.54
CCDC12-204ENST00000460035 H7C4K7 107 aa11.68□□□□□ -0.54
CCDC12-204ENST00000460035 M0QZQ0 153 aa11.68□□□□□ -0.54
CCDC12-204ENST00000460035 TEX28O15482 410 aa11.68□□□□□ -0.54
CCDC12-204ENST00000460035 HUS1O60921 280 aa11.68□□□□□ -0.54
CCDC12-204ENST00000460035 LILRB3O75022 631 aa11.68□□□□□ -0.54
CCDC12-204ENST00000460035 CLASP2O75122 1294 aaKnown RBP11.68□□□□□ -0.54
CCDC12-204ENST00000460035 CNPP09543 421 aaKnown RBP11.68□□□□□ -0.54
CCDC12-204ENST00000460035 ODC1P11926 461 aa11.68□□□□□ -0.54
CCDC12-204ENST00000460035 GTF2H1P32780 548 aa11.68□□□□□ -0.54
CCDC12-204ENST00000460035 GTF2F1P35269 517 aaKnown RBP eCLIP11.68□□□□□ -0.543e-7■■■□□ 14.9
CCDC12-204ENST00000460035 MARSP56192 900 aaKnown RBP11.68□□□□□ -0.54
CCDC12-204ENST00000460035 MYL6P60660 151 aa11.68□□□□□ -0.54
CCDC12-204ENST00000460035 PPP3CAQ08209 521 aa11.68□□□□□ -0.54
CCDC12-204ENST00000460035 NCOA4Q13772 614 aa11.68□□□□□ -0.54
CCDC12-204ENST00000460035 PSMD5Q16401 504 aa11.68□□□□□ -0.54
CCDC12-204ENST00000460035 ZACNQ401N2 412 aa11.68□□□□□ -0.54
CCDC12-204ENST00000460035 VARS2Q5ST30 1063 aaKnown RBP11.68□□□□□ -0.54
CCDC12-204ENST00000460035 TDRD10Q5VZ19 366 aaKnown RBP11.68□□□□□ -0.54
CCDC12-204ENST00000460035 LLGL2Q6P1M3 1020 aa11.68□□□□□ -0.54
CCDC12-204ENST00000460035 C15orf39Q6ZRI6 1047 aa11.68□□□□□ -0.54
CCDC12-204ENST00000460035 ANKS3Q6ZW76 656 aa11.68□□□□□ -0.54
CCDC12-204ENST00000460035 METTL23Q86XA0 190 aa11.68□□□□□ -0.54
CCDC12-204ENST00000460035 PALB2Q86YC2 1186 aa11.68□□□□□ -0.54
CCDC12-204ENST00000460035 LNX1Q8TBB1 728 aaPredicted RBP11.68□□□□□ -0.54
CCDC12-204ENST00000460035 PIK3R5Q8WYR1 880 aa11.68□□□□□ -0.54
CCDC12-204ENST00000460035 DNAJC25Q9H1X3 360 aa11.68□□□□□ -0.54
CCDC12-204ENST00000460035 RXFP1Q9HBX9 757 aa11.68□□□□□ -0.54
CCDC12-204ENST00000460035 APOBEC3CQ9NRW3 190 aaKnown RBP eCLIP11.68□□□□□ -0.54
CCDC12-204ENST00000460035 MAGEC2Q9UBF1 373 aaPredicted RBP11.68□□□□□ -0.54
CCDC12-204ENST00000460035 SNX9Q9Y5X1 595 aa11.68□□□□□ -0.54
CCDC12-204ENST00000460035 NCK2O43639 380 aa11.67□□□□□ -0.54
CCDC12-204ENST00000460035 HLA-DRAP01903 254 aa11.67□□□□□ -0.54
CCDC12-204ENST00000460035 ADH1AP07327 375 aa11.67□□□□□ -0.54
CCDC12-204ENST00000460035 TYMPP19971 482 aa11.67□□□□□ -0.54
CCDC12-204ENST00000460035 PIK3CAP42336 1068 aa11.67□□□□□ -0.54
CCDC12-204ENST00000460035 ARPP19P56211 112 aa11.67□□□□□ -0.54
CCDC12-204ENST00000460035 CREMQ03060 361 aa11.67□□□□□ -0.54
CCDC12-204ENST00000460035 YWHAHQ04917 246 aaPredicted RBP11.67□□□□□ -0.54
CCDC12-204ENST00000460035 HYAL1Q12794 435 aa11.67□□□□□ -0.54
CCDC12-204ENST00000460035 DUSP6Q16828 381 aa11.67□□□□□ -0.54
Retrieved 100 of 20,778 RNA–protein pairs in 52.3 ms