RNA–Protein interactions for RNA: ENST00000459954.1

UBQLN4-202, Transcript of ubiquilin 4, humanhuman

TSL 2

Gene UBQLN4, Length 502 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBQLN4-202ENST00000459954 PLEKHA7Q6IQ23 1121 aa6.51□□□□□ -1.37
UBQLN4-202ENST00000459954 HIBCHQ6NVY1 386 aaPredicted RBP6.51□□□□□ -1.37
UBQLN4-202ENST00000459954 RGMBQ6NW40 437 aa6.51□□□□□ -1.37
UBQLN4-202ENST00000459954 AADACL2Q6P093 401 aa6.51□□□□□ -1.37
UBQLN4-202ENST00000459954 SV2AQ7L0J3 742 aa6.51□□□□□ -1.37
UBQLN4-202ENST00000459954 ASRGL1Q7L266 308 aa6.51□□□□□ -1.37
UBQLN4-202ENST00000459954 SPATA21Q7Z572 469 aa6.51□□□□□ -1.37
UBQLN4-202ENST00000459954 ERO1BQ86YB8 467 aa6.51□□□□□ -1.37
UBQLN4-202ENST00000459954 PHF13Q86YI8 300 aaPredicted RBP6.51□□□□□ -1.37
UBQLN4-202ENST00000459954 RCOR2Q8IZ40 523 aa6.51□□□□□ -1.37
UBQLN4-202ENST00000459954 GPD1LQ8N335 351 aa6.51□□□□□ -1.37
UBQLN4-202ENST00000459954 ZCCHC9Q8N567 271 aaKnown RBP6.51□□□□□ -1.37
UBQLN4-202ENST00000459954 GADD45GIP1Q8TAE8 222 aaPredicted RBP6.51□□□□□ -1.37
UBQLN4-202ENST00000459954 ZNF398Q8TD17 642 aa6.51□□□□□ -1.37
UBQLN4-202ENST00000459954 ACER1Q8TDN7 264 aa6.51□□□□□ -1.37
UBQLN4-202ENST00000459954 DYDC1Q8WWB3 177 aa6.51□□□□□ -1.37
UBQLN4-202ENST00000459954 GPRASP2Q96D09 838 aa6.51□□□□□ -1.37
UBQLN4-202ENST00000459954 KLRG1Q96E93 195 aa6.51□□□□□ -1.37
UBQLN4-202ENST00000459954 RBM41Q96IZ5 413 aaKnown RBP6.51□□□□□ -1.37
UBQLN4-202ENST00000459954 CFAP57Q96MR6 1250 aa6.51□□□□□ -1.37
UBQLN4-202ENST00000459954 SCLT1Q96NL6 688 aa6.51□□□□□ -1.37
UBQLN4-202ENST00000459954 RAB3IPQ96QF0 476 aaPredicted RBP6.51□□□□□ -1.37
UBQLN4-202ENST00000459954 BEGAINQ9BUH8 593 aa6.51□□□□□ -1.37
UBQLN4-202ENST00000459954 CD248Q9HCU0 757 aa6.51□□□□□ -1.37
UBQLN4-202ENST00000459954 POLD4Q9HCU8 107 aa6.51□□□□□ -1.37
UBQLN4-202ENST00000459954 C1orf112Q9NSG2 853 aa6.51□□□□□ -1.37
UBQLN4-202ENST00000459954 NKIRAS1Q9NYS0 192 aa6.51□□□□□ -1.37
UBQLN4-202ENST00000459954 ASIC3Q9UHC3 531 aa6.51□□□□□ -1.37
UBQLN4-202ENST00000459954 ANAPC7Q9UJX3 599 aa6.51□□□□□ -1.37
UBQLN4-202ENST00000459954 CCPG1Q9ULG6 757 aa6.51□□□□□ -1.37
UBQLN4-202ENST00000459954 SMG5Q9UPR3 1016 aaKnown RBP6.51□□□□□ -1.37
UBQLN4-202ENST00000459954 STARD13Q9Y3M8 1113 aa6.51□□□□□ -1.37
UBQLN4-202ENST00000459954 GTF3C5Q9Y5Q8 519 aaPredicted RBP6.51□□□□□ -1.37
UBQLN4-202ENST00000459954 CNTNAP1P78357 1384 aa6.51□□□□□ -1.37
UBQLN4-202ENST00000459954 UMODL1Q5DID0 1318 aa6.5□□□□□ -1.37
UBQLN4-202ENST00000459954 MROH7Q68CQ1 1323 aa6.5□□□□□ -1.37
UBQLN4-202ENST00000459954 TCRBV7S2A1N4TA0A589 114 aa6.5□□□□□ -1.37
UBQLN4-202ENST00000459954 MANSC4A6NHS7 340 aaPredicted RBP6.5□□□□□ -1.37
UBQLN4-202ENST00000459954 TCP11X1B4DZS4 312 aa6.5□□□□□ -1.37
UBQLN4-202ENST00000459954 E7ENQ6 273 aa6.5□□□□□ -1.37
UBQLN4-202ENST00000459954 CXCL11O14625 94 aa6.5□□□□□ -1.37
UBQLN4-202ENST00000459954 DNALI1O14645 258 aaPredicted RBP6.5□□□□□ -1.37
UBQLN4-202ENST00000459954 LIN7AO14910 233 aaPredicted RBP6.5□□□□□ -1.37
UBQLN4-202ENST00000459954 SLC16A4O15374 487 aa6.5□□□□□ -1.37
UBQLN4-202ENST00000459954 CLDN3O15551 220 aa6.5□□□□□ -1.37
UBQLN4-202ENST00000459954 EXTL3O43909 919 aa6.5□□□□□ -1.37
UBQLN4-202ENST00000459954 ZBED4O75132 1171 aa6.5□□□□□ -1.37
UBQLN4-202ENST00000459954 DGAT1O75907 488 aa6.5□□□□□ -1.37
UBQLN4-202ENST00000459954 UBOX5O94941 541 aa6.5□□□□□ -1.37
UBQLN4-202ENST00000459954 CHRM1P11229 460 aaPredicted RBP6.5□□□□□ -1.37
UBQLN4-202ENST00000459954 BRAFP15056 766 aa6.5□□□□□ -1.37
UBQLN4-202ENST00000459954 KLRC2P26717 231 aa6.5□□□□□ -1.37
UBQLN4-202ENST00000459954 ADCY8P40145 1251 aa6.5□□□□□ -1.37
UBQLN4-202ENST00000459954 NSFP46459 744 aaKnown RBP6.5□□□□□ -1.37
UBQLN4-202ENST00000459954 NPTX2P47972 431 aa6.5□□□□□ -1.37
UBQLN4-202ENST00000459954 KCNJ1P48048 391 aa6.5□□□□□ -1.37
UBQLN4-202ENST00000459954 ZNF157P51786 506 aaPredicted RBP6.5□□□□□ -1.37
UBQLN4-202ENST00000459954 GTF2A2P52657 109 aa6.5□□□□□ -1.37
UBQLN4-202ENST00000459954 YARSP54577 528 aaKnown RBP6.5□□□□□ -1.37
UBQLN4-202ENST00000459954 NCALDP61601 193 aa6.5□□□□□ -1.37
UBQLN4-202ENST00000459954 GRM1Q13255 1194 aa6.5□□□□□ -1.37
UBQLN4-202ENST00000459954 TTLL12Q14166 644 aaPredicted RBP6.5□□□□□ -1.37
UBQLN4-202ENST00000459954 PGM5Q15124 567 aa6.5□□□□□ -1.37
UBQLN4-202ENST00000459954 ZACNQ401N2 412 aa6.5□□□□□ -1.37
UBQLN4-202ENST00000459954 CMPK2Q5EBM0 449 aa6.5□□□□□ -1.37
UBQLN4-202ENST00000459954 XKR9Q5GH70 373 aa6.5□□□□□ -1.37
UBQLN4-202ENST00000459954 WDR44Q5JSH3 913 aa6.5□□□□□ -1.37
UBQLN4-202ENST00000459954 SLFN12LQ6IEE8 588 aa6.5□□□□□ -1.37
UBQLN4-202ENST00000459954 ZNF365Q70YC5 407 aa6.5□□□□□ -1.37
UBQLN4-202ENST00000459954 MON1BQ7L1V2 547 aa6.5□□□□□ -1.37
UBQLN4-202ENST00000459954 PCGF5Q86SE9 256 aa6.5□□□□□ -1.37
UBQLN4-202ENST00000459954 NLRX1Q86UT6 975 aa6.5□□□□□ -1.37
UBQLN4-202ENST00000459954 CBWD2Q8IUF1 395 aa6.5□□□□□ -1.37
UBQLN4-202ENST00000459954 SPICE1Q8N0Z3 855 aa6.5□□□□□ -1.37
UBQLN4-202ENST00000459954 AGGF1Q8N302 714 aaeCLIP6.5□□□□□ -1.37
UBQLN4-202ENST00000459954 DNAJC5GQ8N7S2 189 aa6.5□□□□□ -1.37
UBQLN4-202ENST00000459954 DDX55Q8NHQ9 600 aaKnown RBP eCLIP6.5□□□□□ -1.37
UBQLN4-202ENST00000459954 SYTL5Q8TDW5 730 aaPredicted RBP6.5□□□□□ -1.37
UBQLN4-202ENST00000459954 MAML1Q92585 1016 aa6.5□□□□□ -1.37
UBQLN4-202ENST00000459954 INPP5DQ92835 1189 aa6.5□□□□□ -1.37
UBQLN4-202ENST00000459954 KAT5Q92993 513 aa6.5□□□□□ -1.37
UBQLN4-202ENST00000459954 ATP6V0A1Q93050 837 aa6.5□□□□□ -1.37
UBQLN4-202ENST00000459954 FAXDC2Q96IV6 333 aa6.5□□□□□ -1.37
UBQLN4-202ENST00000459954 RSRC1Q96IZ7 334 aaKnown RBP6.5□□□□□ -1.37
UBQLN4-202ENST00000459954 CDHR1Q96JP9 859 aa6.5□□□□□ -1.37
UBQLN4-202ENST00000459954 TMEM237Q96Q45 408 aa6.5□□□□□ -1.37
UBQLN4-202ENST00000459954 OSBPL8Q9BZF1 889 aa6.5□□□□□ -1.37
UBQLN4-202ENST00000459954 ZNF518BQ9C0D4 1074 aa6.5□□□□□ -1.37
UBQLN4-202ENST00000459954 TMEM39BQ9GZU3 492 aa6.5□□□□□ -1.37
UBQLN4-202ENST00000459954 KIAA1683Q9H0B3 1180 aa6.5□□□□□ -1.37
UBQLN4-202ENST00000459954 SLC38A10Q9HBR0 1119 aa6.5□□□□□ -1.37
UBQLN4-202ENST00000459954 KMT5AQ9NQR1 393 aa6.5□□□□□ -1.37
UBQLN4-202ENST00000459954 PICK1Q9NRD5 415 aa6.5□□□□□ -1.37
UBQLN4-202ENST00000459954 TXLNGQ9NUQ3 528 aa6.5□□□□□ -1.37
UBQLN4-202ENST00000459954 SAGE1Q9NXZ1 904 aa6.5□□□□□ -1.37
UBQLN4-202ENST00000459954 DONSONQ9NYP3 566 aa6.5□□□□□ -1.37
UBQLN4-202ENST00000459954 NINJ2Q9NZG7 142 aa6.5□□□□□ -1.37
UBQLN4-202ENST00000459954 KLHL14Q9P2G3 628 aa6.5□□□□□ -1.37
UBQLN4-202ENST00000459954 ARHGAP28Q9P2N2 729 aa6.5□□□□□ -1.37
UBQLN4-202ENST00000459954 CTNNAL1Q9UBT7 734 aa6.5□□□□□ -1.37
Retrieved 100 of 20,778 RNA–protein pairs in 20.6 ms