RNA–Protein interactions for RNA: ENST00000458268.5

USP39-209, Transcript of ubiquitin specific peptidase 39, humanhuman

TSL 4

Gene USP39, Length 751 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP39-209ENST00000458268 ZNF233A6NK53 670 aa20.2■□□□□ 0.82
USP39-209ENST00000458268 LOC730098B7Z3J9 87 aa20.2■□□□□ 0.82
USP39-209ENST00000458268 PRRG1O14668 218 aa20.2■□□□□ 0.82
USP39-209ENST00000458268 SPTLC1O15269 473 aa20.2■□□□□ 0.82
USP39-209ENST00000458268 TGFB1I1O43294 461 aa20.2■□□□□ 0.82
USP39-209ENST00000458268 ZMYND10O75800 440 aa20.2■□□□□ 0.82
USP39-209ENST00000458268 ITGB3P05106 788 aa20.2■□□□□ 0.82
USP39-209ENST00000458268 ODC1P11926 461 aa20.2■□□□□ 0.82
USP39-209ENST00000458268 POLR2BP30876 1174 aaKnown RBP20.2■□□□□ 0.82
USP39-209ENST00000458268 GBP2P32456 591 aaPredicted RBP20.2■□□□□ 0.82
USP39-209ENST00000458268 ELF1P32519 619 aa20.2■□□□□ 0.82
USP39-209ENST00000458268 YWHAHQ04917 246 aaPredicted RBP20.2■□□□□ 0.82
USP39-209ENST00000458268 BFSP1Q12934 665 aa20.2■□□□□ 0.82
USP39-209ENST00000458268 RAB33AQ14088 237 aa20.2■□□□□ 0.82
USP39-209ENST00000458268 KIAA0895Q8NCT3 520 aa20.2■□□□□ 0.82
USP39-209ENST00000458268 CACTINQ8WUQ7 758 aaKnown RBP20.2■□□□□ 0.82
USP39-209ENST00000458268 MTMR12Q9C0I1 747 aa20.2■□□□□ 0.82
USP39-209ENST00000458268 AGAP1Q9UPQ3 857 aa20.2■□□□□ 0.82
USP39-209ENST00000458268 R3HCC1Q9Y3T6 440 aaKnown RBP20.2■□□□□ 0.82
USP39-209ENST00000458268 TSC2P49815 1807 aa20.2■□□□□ 0.82
USP39-209ENST00000458268 FAM237AA0A1B0GTK4 181 aa20.19■□□□□ 0.82
USP39-209ENST00000458268 OR4Q2P0C623 313 aa20.19■□□□□ 0.82
USP39-209ENST00000458268 DLATP10515 647 aaKnown RBP20.19■□□□□ 0.82
USP39-209ENST00000458268 TAF6P49848 677 aa20.19■□□□□ 0.82
USP39-209ENST00000458268 LILRA4P59901 499 aa20.19■□□□□ 0.82
USP39-209ENST00000458268 KNOP1Q1ED39 458 aaKnown RBP20.19■□□□□ 0.82
USP39-209ENST00000458268 OVOS1Q6IE37 1185 aa20.19■□□□□ 0.82
USP39-209ENST00000458268 HDAC7Q8WUI4 952 aa20.19■□□□□ 0.82
USP39-209ENST00000458268 CCDC34Q96HJ3 373 aa20.19■□□□□ 0.82
USP39-209ENST00000458268 ANKRD36BP1Q96IX9 119 aa20.19■□□□□ 0.82
USP39-209ENST00000458268 CYP4F11Q9HBI6 524 aa20.19■□□□□ 0.82
USP39-209ENST00000458268 MAPK8IP1Q9UQF2 711 aa20.19■□□□□ 0.82
USP39-209ENST00000458268 DOCK6Q96HP0 2047 aa20.19■□□□□ 0.82
USP39-209ENST00000458268 WDR27A2RRH5 827 aa20.18■□□□□ 0.82
USP39-209ENST00000458268 KIAA0391O15091 583 aaKnown RBP20.18■□□□□ 0.82
USP39-209ENST00000458268 DCXO43602 365 aa20.18■□□□□ 0.82
USP39-209ENST00000458268 EXOC3O60645 756 aa20.18■□□□□ 0.82
USP39-209ENST00000458268 PNOCQ13519 176 aa20.18■□□□□ 0.82
USP39-209ENST00000458268 SNRNP35Q16560 246 aaKnown RBP20.18■□□□□ 0.82
USP39-209ENST00000458268 C15orf39Q6ZRI6 1047 aa20.18■□□□□ 0.82
USP39-209ENST00000458268 GET4Q7L5D6 327 aaPredicted RBP20.18■□□□□ 0.82
USP39-209ENST00000458268 GRASPQ7Z6J2 395 aaPredicted RBP20.18■□□□□ 0.82
USP39-209ENST00000458268 CSGALNACT2Q8N6G5 542 aa20.18■□□□□ 0.82
USP39-209ENST00000458268 XXYLT1Q8NBI6 393 aa20.18■□□□□ 0.82
USP39-209ENST00000458268 CCDC127Q96BQ5 260 aa20.18■□□□□ 0.82
USP39-209ENST00000458268 ZNF707Q96C28 371 aaPredicted RBP20.18■□□□□ 0.82
USP39-209ENST00000458268 ZNF560Q96MR9 790 aa20.18■□□□□ 0.82
USP39-209ENST00000458268 PGLYRP2Q96PD5 576 aa20.18■□□□□ 0.82
USP39-209ENST00000458268 PRKD2Q9BZL6 878 aa20.18■□□□□ 0.82
USP39-209ENST00000458268 ZDHHC7Q9NXF8 308 aa20.18■□□□□ 0.82
USP39-209ENST00000458268 CLUHO75153 1309 aa20.18■□□□□ 0.82
USP39-209ENST00000458268 ANO9A1A5B4 782 aa20.17■□□□□ 0.82
USP39-209ENST00000458268 M0QZQ0 153 aa20.17■□□□□ 0.82
USP39-209ENST00000458268 PIRO00625 290 aa20.17■□□□□ 0.82
USP39-209ENST00000458268 CYB561D2O14569 222 aa20.17■□□□□ 0.82
USP39-209ENST00000458268 TNNC2P02585 160 aa20.17■□□□□ 0.82
USP39-209ENST00000458268 MYL1P05976 194 aa20.17■□□□□ 0.82
USP39-209ENST00000458268 TNNI1P19237 187 aa20.17■□□□□ 0.82
USP39-209ENST00000458268 NTHL1P78549 312 aa20.17■□□□□ 0.82
USP39-209ENST00000458268 DPYDQ12882 1025 aa20.17■□□□□ 0.82
USP39-209ENST00000458268 PSMD2Q13200 908 aa20.17■□□□□ 0.82
USP39-209ENST00000458268 SV2CQ496J9 727 aa20.17■□□□□ 0.82
USP39-209ENST00000458268 METTL23Q86XA0 190 aa20.17■□□□□ 0.82
USP39-209ENST00000458268 NT5DC4Q86YG4 428 aa20.17■□□□□ 0.82
USP39-209ENST00000458268 C1orf127Q8N9H9 656 aa20.17■□□□□ 0.82
USP39-209ENST00000458268 CMASQ8NFW8 434 aaPredicted RBP20.17■□□□□ 0.82
USP39-209ENST00000458268 ERCC4Q92889 916 aaPredicted RBP20.17■□□□□ 0.82
USP39-209ENST00000458268 ACSF2Q96CM8 615 aaPredicted RBP20.17■□□□□ 0.82
USP39-209ENST00000458268 FNBP1Q96RU3 617 aa20.17■□□□□ 0.82
USP39-209ENST00000458268 XYLBO75191 536 aa20.16■□□□□ 0.82
USP39-209ENST00000458268 LRG1P02750 347 aa20.16■□□□□ 0.82
USP39-209ENST00000458268 ASGR2P07307 311 aa20.16■□□□□ 0.82
USP39-209ENST00000458268 ALADP13716 330 aa20.16■□□□□ 0.82
USP39-209ENST00000458268 POU5F1Q01860 360 aaKnown RBP20.16■□□□□ 0.82
USP39-209ENST00000458268 ADCY1Q08828 1119 aa20.16■□□□□ 0.82
USP39-209ENST00000458268 BMT2Q1RMZ1 405 aa20.16■□□□□ 0.82
USP39-209ENST00000458268 SLC8B1Q6J4K2 584 aa20.16■□□□□ 0.82
USP39-209ENST00000458268 ST13P5Q8NFI4 369 aaPredicted RBP20.16■□□□□ 0.82
USP39-209ENST00000458268 OR5B17Q8NGF7 314 aa20.16■□□□□ 0.82
USP39-209ENST00000458268 KIAA1586Q9HCI6 787 aa20.16■□□□□ 0.82
USP39-209ENST00000458268 LIMD1Q9UGP4 676 aa20.16■□□□□ 0.82
USP39-209ENST00000458268 CIZ1Q9ULV3 898 aaPredicted RBP20.16■□□□□ 0.82
USP39-209ENST00000458268 PTPRJQ12913 1337 aa20.16■□□□□ 0.82
USP39-209ENST00000458268 MYO10Q9HD67 2058 aa20.15■□□□□ 0.82
USP39-209ENST00000458268 AARSP49588 968 aaKnown RBP eCLIP20.15■□□□□ 0.82
USP39-209ENST00000458268 MRPL58Q14197 206 aaKnown RBP20.15■□□□□ 0.82
USP39-209ENST00000458268 SURF1Q15526 300 aa20.15■□□□□ 0.82
USP39-209ENST00000458268 SCARA3Q6AZY7 606 aa20.15■□□□□ 0.82
USP39-209ENST00000458268 RNF19BQ6ZMZ0 732 aa20.15■□□□□ 0.82
USP39-209ENST00000458268 OTOP3Q7RTS5 596 aa20.15■□□□□ 0.82
USP39-209ENST00000458268 FMR1NBQ8N0W7 255 aaPredicted RBP20.15■□□□□ 0.82
USP39-209ENST00000458268 ZNF461Q8TAF7 563 aa20.15■□□□□ 0.82
USP39-209ENST00000458268 TMEM209Q96SK2 561 aa20.15■□□□□ 0.82
USP39-209ENST00000458268 WDR6Q9NNW5 1121 aaKnown RBP20.15■□□□□ 0.82
USP39-209ENST00000458268 INTS13Q9NVM9 706 aa20.15■□□□□ 0.82
USP39-209ENST00000458268 HCFC1R1Q9NWW0 138 aa20.15■□□□□ 0.82
USP39-209ENST00000458268 ARHGEF37A1IGU5 675 aa20.14■□□□□ 0.81
USP39-209ENST00000458268 KPNA7A9QM74 516 aa20.14■□□□□ 0.81
USP39-209ENST00000458268 PI4K2BG5E9Z4 385 aa20.14■□□□□ 0.81
USP39-209ENST00000458268 SEC24AO95486 1093 aa20.14■□□□□ 0.81
Retrieved 100 of 20,778 RNA–protein pairs in 26.9 ms