RNA–Protein interactions for RNA: ENST00000457179.5

TOP3B-213, Transcript of DNA topoisomerase III beta, humanhuman

TSL 5

Gene TOP3B, Length 3,061 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TOP3B-213ENST00000457179 PGM2Q96G03 612 aa14.42□□□□□ -0.1
TOP3B-213ENST00000457179 FAM213AQ9BRX8 229 aa14.42□□□□□ -0.1
TOP3B-213ENST00000457179 THAP2Q9H0W7 228 aa14.42□□□□□ -0.1
TOP3B-213ENST00000457179 SLITRK6Q9H5Y7 841 aa14.42□□□□□ -0.1
TOP3B-213ENST00000457179 COL2A1P02458 1487 aaPredicted RBP14.42□□□□□ -0.1
TOP3B-213ENST00000457179 MKI67P46013 3256 aaKnown RBP14.41□□□□□ -0.1
TOP3B-213ENST00000457179 TMEM120BA0PK00 339 aa14.41□□□□□ -0.1
TOP3B-213ENST00000457179 RASGRF2O14827 1237 aa14.41□□□□□ -0.1
TOP3B-213ENST00000457179 ENTPD5O75356 428 aa14.41□□□□□ -0.1
TOP3B-213ENST00000457179 GH1P01241 217 aa14.41□□□□□ -0.1
TOP3B-213ENST00000457179 SRGAP2CP0DJJ0 459 aa14.41□□□□□ -0.1
TOP3B-213ENST00000457179 TPBGLP0DKB5 382 aa14.41□□□□□ -0.1
TOP3B-213ENST00000457179 OSTNP61366 133 aa14.41□□□□□ -0.1
TOP3B-213ENST00000457179 BFSP1Q12934 665 aa14.41□□□□□ -0.1
TOP3B-213ENST00000457179 PHLDB3Q6NSJ2 640 aa14.41□□□□□ -0.1
TOP3B-213ENST00000457179 LRRC57Q8N9N7 239 aa14.41□□□□□ -0.1
TOP3B-213ENST00000457179 STK32AQ8WU08 396 aa14.41□□□□□ -0.1
TOP3B-213ENST00000457179 MAIP1Q8WWC4 291 aa14.41□□□□□ -0.1
TOP3B-213ENST00000457179 CTNNBL1Q8WYA6 563 aaPredicted RBP14.41□□□□□ -0.1
TOP3B-213ENST00000457179 TMEM165Q9HC07 324 aa14.41□□□□□ -0.1
TOP3B-213ENST00000457179 KLHL14Q9P2G3 628 aa14.41□□□□□ -0.1
TOP3B-213ENST00000457179 HAO1Q9UJM8 370 aa14.41□□□□□ -0.1
TOP3B-213ENST00000457179 BZW2Q9Y6E2 419 aaKnown RBP14.41□□□□□ -0.1
TOP3B-213ENST00000457179 GJB1P08034 283 aa14.41□□□□□ -0.1
TOP3B-213ENST00000457179 LONRF1Q17RB8 773 aa14.41□□□□□ -0.1
TOP3B-213ENST00000457179 C2CD6Q53TS8 623 aa14.41□□□□□ -0.1
TOP3B-213ENST00000457179 ZFAND2BQ8WV99 257 aa14.41□□□□□ -0.1
TOP3B-213ENST00000457179 COPS5Q92905 334 aa14.41□□□□□ -0.1
TOP3B-213ENST00000457179 ATP6V0A1Q93050 837 aa14.41□□□□□ -0.1
TOP3B-213ENST00000457179 ASCC2Q9H1I8 757 aaPredicted RBP14.41□□□□□ -0.1
TOP3B-213ENST00000457179 DAAM1Q9Y4D1 1078 aa14.41□□□□□ -0.1
TOP3B-213ENST00000457179 SLC16A3O15427 465 aaKnown RBP14.4□□□□□ -0.1
TOP3B-213ENST00000457179 OAS1P00973 400 aaKnown RBP14.4□□□□□ -0.1
TOP3B-213ENST00000457179 AGTP01019 485 aa14.4□□□□□ -0.1
TOP3B-213ENST00000457179 IREB2P48200 963 aaKnown RBP14.4□□□□□ -0.1
TOP3B-213ENST00000457179 SERPINB4P48594 390 aa14.4□□□□□ -0.1
TOP3B-213ENST00000457179 JAM2P57087 298 aa14.4□□□□□ -0.1
TOP3B-213ENST00000457179 CCDC6Q16204 474 aa14.4□□□□□ -0.1
TOP3B-213ENST00000457179 BMT2Q1RMZ1 405 aa14.4□□□□□ -0.1
TOP3B-213ENST00000457179 C6orf118Q5T5N4 469 aa14.4□□□□□ -0.1
TOP3B-213ENST00000457179 B3GNT9Q6UX72 402 aa14.4□□□□□ -0.1
TOP3B-213ENST00000457179 INTS8Q75QN2 995 aaKnown RBP14.4□□□□□ -0.1
TOP3B-213ENST00000457179 LRRC71Q8N4P6 559 aa14.4□□□□□ -0.1
TOP3B-213ENST00000457179 TRAPPC12Q8WVT3 735 aa14.4□□□□□ -0.1
TOP3B-213ENST00000457179 OPTNQ96CV9 577 aa14.4□□□□□ -0.1
TOP3B-213ENST00000457179 ZBTB45Q96K62 511 aaPredicted RBP14.4□□□□□ -0.1
TOP3B-213ENST00000457179 ACCSQ96QU6 501 aa14.4□□□□□ -0.1
TOP3B-213ENST00000457179 SCOCQ9UIL1 159 aa14.4□□□□□ -0.1
TOP3B-213ENST00000457179 NOP56O00567 594 aaKnown RBP14.4□□□□□ -0.1
TOP3B-213ENST00000457179 BCRP11274 1271 aa14.4□□□□□ -0.1
TOP3B-213ENST00000457179 KCNA2P16389 499 aa14.4□□□□□ -0.1
TOP3B-213ENST00000457179 VAMP7P51809 220 aa14.4□□□□□ -0.1
TOP3B-213ENST00000457179 FOXB2Q5VYV0 432 aa14.4□□□□□ -0.1
TOP3B-213ENST00000457179 TAOK1Q7L7X3 1001 aa14.4□□□□□ -0.1
TOP3B-213ENST00000457179 ZC3H18Q86VM9 953 aaKnown RBP14.4□□□□□ -0.1
TOP3B-213ENST00000457179 CCNJLQ8IV13 435 aa14.4□□□□□ -0.1
TOP3B-213ENST00000457179 ARHGEF19Q8IW93 802 aa14.4□□□□□ -0.1
TOP3B-213ENST00000457179 FBXO16Q8IX29 292 aaPredicted RBP14.4□□□□□ -0.1
TOP3B-213ENST00000457179 XXYLT1Q8NBI6 393 aa14.4□□□□□ -0.1
TOP3B-213ENST00000457179 SPATC1LQ9H0A9 340 aa14.4□□□□□ -0.1
TOP3B-213ENST00000457179 ZNF112Q9UJU3 913 aa14.4□□□□□ -0.1
TOP3B-213ENST00000457179 RPTORQ8N122 1335 aa14.4□□□□□ -0.1
TOP3B-213ENST00000457179 UNC5CO95185 931 aa14.4□□□□□ -0.1
TOP3B-213ENST00000457179 GGPS1O95749 300 aa14.4□□□□□ -0.1
TOP3B-213ENST00000457179 PSAPP07602 524 aa14.4□□□□□ -0.1
TOP3B-213ENST00000457179 JAK3P52333 1124 aa14.4□□□□□ -0.1
TOP3B-213ENST00000457179 MGAT5Q09328 741 aa14.4□□□□□ -0.1
TOP3B-213ENST00000457179 CPNE8Q86YQ8 564 aa14.4□□□□□ -0.1
TOP3B-213ENST00000457179 REPS2Q8NFH8 660 aa14.4□□□□□ -0.1
TOP3B-213ENST00000457179 ERP27Q96DN0 273 aa14.4□□□□□ -0.1
TOP3B-213ENST00000457179 TGS1Q96RS0 853 aaKnown RBP14.4□□□□□ -0.1
TOP3B-213ENST00000457179 POLR3FQ9H1D9 316 aaPredicted RBP14.4□□□□□ -0.1
TOP3B-213ENST00000457179 METTL5Q9NRN9 209 aaKnown RBP14.4□□□□□ -0.1
TOP3B-213ENST00000457179 AMFRQ9UKV5 643 aa14.4□□□□□ -0.1
TOP3B-213ENST00000457179 NUDT17P0C025 328 aa14.39□□□□□ -0.11
TOP3B-213ENST00000457179 TNNI1P19237 187 aa14.39□□□□□ -0.11
TOP3B-213ENST00000457179 HOXA7P31268 230 aaPredicted RBP14.39□□□□□ -0.11
TOP3B-213ENST00000457179 EPHX2P34913 555 aa14.39□□□□□ -0.11
TOP3B-213ENST00000457179 PRKCIP41743 596 aa14.39□□□□□ -0.11
TOP3B-213ENST00000457179 LBRQ14739 615 aaKnown RBP14.39□□□□□ -0.11
TOP3B-213ENST00000457179 ZBTB33Q86T24 672 aa14.39□□□□□ -0.11
TOP3B-213ENST00000457179 FAM13CQ8NE31 585 aa14.39□□□□□ -0.11
TOP3B-213ENST00000457179 CDCA5Q96FF9 252 aa14.39□□□□□ -0.11
TOP3B-213ENST00000457179 CTTNBP2NLQ9P2B4 639 aa14.39□□□□□ -0.11
TOP3B-213ENST00000457179 APEX2Q9UBZ4 518 aa14.39□□□□□ -0.11
TOP3B-213ENST00000457179 ADGRA3Q8IWK6 1321 aa14.39□□□□□ -0.11
TOP3B-213ENST00000457179 EPHB2P29323 1055 aa14.39□□□□□ -0.11
TOP3B-213ENST00000457179 SNRNP35Q16560 246 aaKnown RBP14.39□□□□□ -0.11
TOP3B-213ENST00000457179 NT5DC3Q86UY8 548 aa14.39□□□□□ -0.11
TOP3B-213ENST00000457179 EXOC3L1Q86VI1 746 aa14.39□□□□□ -0.11
TOP3B-213ENST00000457179 DHX38Q92620 1227 aaKnown RBP14.39□□□□□ -0.11
TOP3B-213ENST00000457179 BTBD6Q96KE9 485 aa14.39□□□□□ -0.11
TOP3B-213ENST00000457179 STK33Q9BYT3 514 aa14.39□□□□□ -0.11
TOP3B-213ENST00000457179 ERVK-5Q9HDB9 667 aa14.39□□□□□ -0.11
TOP3B-213ENST00000457179 EIF3DO15371 548 aaKnown RBP eCLIP14.38□□□□□ -0.11
TOP3B-213ENST00000457179 CREB3O43889 395 aa14.38□□□□□ -0.11
TOP3B-213ENST00000457179 ADRB2P07550 413 aa14.38□□□□□ -0.11
TOP3B-213ENST00000457179 KRT5P13647 590 aa14.38□□□□□ -0.11
TOP3B-213ENST00000457179 MXI1P50539 228 aa14.38□□□□□ -0.11
TOP3B-213ENST00000457179 AUHQ13825 339 aaKnown RBP14.38□□□□□ -0.11
Retrieved 100 of 20,778 RNA–protein pairs in 42.2 ms