RNA–Protein interactions for RNA: ENST00000452724.1

USP40-209, Transcript of ubiquitin specific peptidase 40, humanhuman

TSL 3

Gene USP40, Length 453 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP40-209ENST00000452724 FTH1P19P0C7X4 201 aa5.09□□□□□ -1.59
USP40-209ENST00000452724 SLC6A2P23975 617 aa5.09□□□□□ -1.59
USP40-209ENST00000452724 HTR1BP28222 390 aa5.09□□□□□ -1.59
USP40-209ENST00000452724 SLC6A4P31645 630 aa5.09□□□□□ -1.59
USP40-209ENST00000452724 BMPR1AP36894 532 aa5.09□□□□□ -1.59
USP40-209ENST00000452724 FLYWCH1Q4VC44 716 aa5.09□□□□□ -1.59
USP40-209ENST00000452724 KRTAP5-3Q6L8H2 238 aa5.09□□□□□ -1.59
USP40-209ENST00000452724 ARMC6Q6NXE6 501 aa5.09□□□□□ -1.59
USP40-209ENST00000452724 DPY19L2P1Q6NXN4 242 aa5.09□□□□□ -1.59
USP40-209ENST00000452724 MED25Q71SY5 747 aa5.09□□□□□ -1.59
USP40-209ENST00000452724 ARHGEF19Q8IW93 802 aa5.09□□□□□ -1.59
USP40-209ENST00000452724 SH2D3CQ8N5H7 860 aa5.09□□□□□ -1.59
USP40-209ENST00000452724 KLHDC4Q8TBB5 520 aa5.09□□□□□ -1.59
USP40-209ENST00000452724 PACSIN1Q9BY11 444 aa5.09□□□□□ -1.59
USP40-209ENST00000452724 SERHL2Q9H4I8 314 aa5.09□□□□□ -1.59
USP40-209ENST00000452724 GSTO2Q9H4Y5 243 aa5.09□□□□□ -1.59
USP40-209ENST00000452724 WDCPQ9H6R7 721 aa5.09□□□□□ -1.59
USP40-209ENST00000452724 GABBR1Q9UBS5 961 aa5.09□□□□□ -1.59
USP40-209ENST00000452724 ZNHIT2Q9UHR6 403 aa5.09□□□□□ -1.59
USP40-209ENST00000452724 FEZ2Q9UHY8 353 aaPredicted RBP5.09□□□□□ -1.59
USP40-209ENST00000452724 CHST2Q9Y4C5 530 aa5.09□□□□□ -1.59
USP40-209ENST00000452724 H3BUI4 141 aa5.08□□□□□ -1.6
USP40-209ENST00000452724 TYRP14679 529 aa5.08□□□□□ -1.6
USP40-209ENST00000452724 PROZP22891 400 aa5.08□□□□□ -1.6
USP40-209ENST00000452724 BLOC1S1P78537 153 aa5.08□□□□□ -1.6
USP40-209ENST00000452724 GUCY1B3Q02153 619 aa5.08□□□□□ -1.6
USP40-209ENST00000452724 COL10A1Q03692 680 aa5.08□□□□□ -1.6
USP40-209ENST00000452724 BEAN1Q3B7T3 259 aa5.08□□□□□ -1.6
USP40-209ENST00000452724 HSP90AB2PQ58FF8 381 aa5.08□□□□□ -1.6
USP40-209ENST00000452724 FAM102AQ5T9C2 384 aaPredicted RBP5.08□□□□□ -1.6
USP40-209ENST00000452724 OVCH2Q7RTZ1 564 aa5.08□□□□□ -1.6
USP40-209ENST00000452724 FITM2Q8N6M3 262 aa5.08□□□□□ -1.6
USP40-209ENST00000452724 MTFMTQ96DP5 389 aaKnown RBP5.08□□□□□ -1.6
USP40-209ENST00000452724 SLC35A4Q96G79 324 aa5.08□□□□□ -1.6
USP40-209ENST00000452724 C8orf48Q96LL4 319 aa5.08□□□□□ -1.6
USP40-209ENST00000452724 LRFN3Q9BTN0 628 aa5.08□□□□□ -1.6
USP40-209ENST00000452724 REXO4Q9GZR2 422 aaKnown RBP5.08□□□□□ -1.6
USP40-209ENST00000452724 RIOX1Q9H6W3 641 aa5.08□□□□□ -1.6
USP40-209ENST00000452724 GNL3LQ9NVN8 582 aaKnown RBP5.08□□□□□ -1.6
USP40-209ENST00000452724 PNPOQ9NVS9 261 aa5.08□□□□□ -1.6
USP40-209ENST00000452724 SIDT1Q9NXL6 827 aaKnown RBP5.08□□□□□ -1.6
USP40-209ENST00000452724 OBP2AQ9NY56 170 aa5.08□□□□□ -1.6
USP40-209ENST00000452724 JKAMPQ9P055 326 aa5.08□□□□□ -1.6
USP40-209ENST00000452724 ANKFY1Q9P2R3 1169 aa5.08□□□□□ -1.6
USP40-209ENST00000452724 CDHR4A6H8M9 788 aa5.07□□□□□ -1.6
USP40-209ENST00000452724 SLC43A1O75387 559 aa5.07□□□□□ -1.6
USP40-209ENST00000452724 TUSC2O75896 110 aa5.07□□□□□ -1.6
USP40-209ENST00000452724 DDX6P26196 483 aaKnown RBP eCLIP5.07□□□□□ -1.6
USP40-209ENST00000452724 ZFP36P26651 326 aaKnown RBP5.07□□□□□ -1.6
USP40-209ENST00000452724 PRDX5P30044 214 aa5.07□□□□□ -1.6
USP40-209ENST00000452724 ADRA1BP35368 520 aa5.07□□□□□ -1.6
USP40-209ENST00000452724 ZEB1P37275 1124 aaPredicted RBP5.07□□□□□ -1.6
USP40-209ENST00000452724 PTTG1IPP53801 180 aa5.07□□□□□ -1.6
USP40-209ENST00000452724 NKX6-1P78426 367 aaPredicted RBP5.07□□□□□ -1.6
USP40-209ENST00000452724 FAM189BP81408 668 aa5.07□□□□□ -1.6
USP40-209ENST00000452724 GBX1Q14549 363 aa5.07□□□□□ -1.6
USP40-209ENST00000452724 PLS1Q14651 629 aa5.07□□□□□ -1.6
USP40-209ENST00000452724 ERCC6LQ2NKX8 1250 aa5.07□□□□□ -1.6
USP40-209ENST00000452724 STRIP1Q5VSL9 837 aa5.07□□□□□ -1.6
USP40-209ENST00000452724 AGAP9Q5VTM2 703 aa5.07□□□□□ -1.6
USP40-209ENST00000452724 METRNLQ641Q3 311 aa5.07□□□□□ -1.6
USP40-209ENST00000452724 Q6YL49 198 aa5.07□□□□□ -1.6
USP40-209ENST00000452724 ZNF365Q70YC5 407 aa5.07□□□□□ -1.6
USP40-209ENST00000452724 DAAM2Q86T65 1068 aa5.07□□□□□ -1.6
USP40-209ENST00000452724 FAM90A1Q86YD7 464 aa5.07□□□□□ -1.6
USP40-209ENST00000452724 RHOT2Q8IXI1 618 aa5.07□□□□□ -1.6
USP40-209ENST00000452724 CPEB3Q8NE35 698 aaKnown RBP5.07□□□□□ -1.6
USP40-209ENST00000452724 PLBD2Q8NHP8 589 aa5.07□□□□□ -1.6
USP40-209ENST00000452724 TBC1D15Q8TC07 691 aa5.07□□□□□ -1.6
USP40-209ENST00000452724 NEU1Q99519 415 aa5.07□□□□□ -1.6
USP40-209ENST00000452724 WDR11Q9BZH6 1224 aa5.07□□□□□ -1.6
USP40-209ENST00000452724 TMEM60Q9H2L4 133 aa5.07□□□□□ -1.6
USP40-209ENST00000452724 PRDM11Q9NQV5 511 aa5.07□□□□□ -1.6
USP40-209ENST00000452724 DDX20Q9UHI6 824 aaKnown RBP5.07□□□□□ -1.6
USP40-209ENST00000452724 ATP11BQ9Y2G3 1177 aa5.07□□□□□ -1.6
USP40-209ENST00000452724 FPGT-TNNI3KV9GXZ4 949 aa5.07□□□□□ -1.6
USP40-209ENST00000452724 A0A088AWK7 358 aa5.06□□□□□ -1.6
USP40-209ENST00000452724 ZAR1LA6NP61 321 aa5.06□□□□□ -1.6
USP40-209ENST00000452724 LPXNO60711 386 aa5.06□□□□□ -1.6
USP40-209ENST00000452724 PRSS23O95084 383 aa5.06□□□□□ -1.6
USP40-209ENST00000452724 HKR1P10072 659 aa5.06□□□□□ -1.6
USP40-209ENST00000452724 GCSHP23434 173 aa5.06□□□□□ -1.6
USP40-209ENST00000452724 PIK3CGP48736 1102 aa5.06□□□□□ -1.6
USP40-209ENST00000452724 RAB1AP62820 205 aa5.06□□□□□ -1.6
USP40-209ENST00000452724 GRM3Q14832 879 aa5.06□□□□□ -1.6
USP40-209ENST00000452724 SPDYE7PQ495Y7 208 aa5.06□□□□□ -1.6
USP40-209ENST00000452724 ANO6Q4KMQ2 910 aa5.06□□□□□ -1.6
USP40-209ENST00000452724 CCDC93Q567U6 631 aa5.06□□□□□ -1.6
USP40-209ENST00000452724 UTP14CQ5TAP6 766 aaKnown RBP5.06□□□□□ -1.6
USP40-209ENST00000452724 ABHD17BQ5VST6 288 aa5.06□□□□□ -1.6
USP40-209ENST00000452724 AOPEPQ8N6M6 819 aa5.06□□□□□ -1.6
USP40-209ENST00000452724 OR56A1Q8NGH5 318 aa5.06□□□□□ -1.6
USP40-209ENST00000452724 GPR150Q8NGU9 434 aa5.06□□□□□ -1.6
USP40-209ENST00000452724 CAVIN3Q969G5 261 aa5.06□□□□□ -1.6
USP40-209ENST00000452724 CCDC136Q96JN2 1154 aa5.06□□□□□ -1.6
USP40-209ENST00000452724 COQ10AQ96MF6 247 aa5.06□□□□□ -1.6
USP40-209ENST00000452724 C1orf43Q9BWL3 253 aa5.06□□□□□ -1.6
USP40-209ENST00000452724 B3GNT5Q9BYG0 378 aa5.06□□□□□ -1.6
USP40-209ENST00000452724 MRPL46Q9H2W6 279 aaKnown RBP5.06□□□□□ -1.6
USP40-209ENST00000452724 FAM204AQ9H8W3 233 aa5.06□□□□□ -1.6
Retrieved 100 of 20,778 RNA–protein pairs in 23.7 ms