RNA–Protein interactions for RNA: ENST00000452128.6

SCAMP4-205, Transcript of secretory carrier membrane protein 4, humanhuman

TSL 2

Gene SCAMP4, Length 718 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCAMP4-205ENST00000452128 CDY1Q9Y6F8 540 aa17.45■□□□□ 0.38
SCAMP4-205ENST00000452128 ANK1P16157 1881 aa17.44■□□□□ 0.38
SCAMP4-205ENST00000452128 VNN2O95498 520 aa17.44■□□□□ 0.38
SCAMP4-205ENST00000452128 RPN1P04843 607 aaKnown RBP17.44■□□□□ 0.38
SCAMP4-205ENST00000452128 CYP11A1P05108 521 aa17.44■□□□□ 0.38
SCAMP4-205ENST00000452128 TYMPP19971 482 aa17.44■□□□□ 0.38
SCAMP4-205ENST00000452128 HOXA9P31269 272 aa17.44■□□□□ 0.38
SCAMP4-205ENST00000452128 MCM4P33991 863 aa17.44■□□□□ 0.38
SCAMP4-205ENST00000452128 ROR1Q01973 937 aa17.44■□□□□ 0.38
SCAMP4-205ENST00000452128 UVSSAQ2YD98 709 aa17.44■□□□□ 0.38
SCAMP4-205ENST00000452128 RTL10Q7L3V2 364 aa17.44■□□□□ 0.38
SCAMP4-205ENST00000452128 NELFCDQ8IXH7 590 aa17.44■□□□□ 0.38
SCAMP4-205ENST00000452128 APPL2Q8NEU8 664 aa17.44■□□□□ 0.38
SCAMP4-205ENST00000452128 ZNF461Q8TAF7 563 aa17.44■□□□□ 0.38
SCAMP4-205ENST00000452128 SPATA20Q8TB22 786 aa17.44■□□□□ 0.38
SCAMP4-205ENST00000452128 SENP8Q96LD8 212 aa17.44■□□□□ 0.38
SCAMP4-205ENST00000452128 KIAA1586Q9HCI6 787 aa17.44■□□□□ 0.38
SCAMP4-205ENST00000452128 WDR6Q9NNW5 1121 aaKnown RBP17.44■□□□□ 0.38
SCAMP4-205ENST00000452128 CGNQ9P2M7 1197 aaKnown RBP17.44■□□□□ 0.38
SCAMP4-205ENST00000452128 SIX4Q9UIU6 781 aa17.44■□□□□ 0.38
SCAMP4-205ENST00000452128 USTQ9Y2C2 406 aa17.44■□□□□ 0.38
SCAMP4-205ENST00000452128 PTPRJQ12913 1337 aa17.44■□□□□ 0.38
SCAMP4-205ENST00000452128 WDR27A2RRH5 827 aa17.43■□□□□ 0.38
SCAMP4-205ENST00000452128 ZNF233A6NK53 670 aa17.43■□□□□ 0.38
SCAMP4-205ENST00000452128 CLIC2O15247 247 aa17.43■□□□□ 0.38
SCAMP4-205ENST00000452128 N4BP1O75113 896 aaKnown RBP17.43■□□□□ 0.38
SCAMP4-205ENST00000452128 SSTR3P32745 418 aaPredicted RBP17.43■□□□□ 0.38
SCAMP4-205ENST00000452128 MCCD1P59942 119 aaPredicted RBP17.43■□□□□ 0.38
SCAMP4-205ENST00000452128 KCNB1Q14721 858 aa17.43■□□□□ 0.38
SCAMP4-205ENST00000452128 LIMS2Q7Z4I7 341 aa17.43■□□□□ 0.38
SCAMP4-205ENST00000452128 SLC9A9Q8IVB4 645 aa17.43■□□□□ 0.38
SCAMP4-205ENST00000452128 RPGRIP1Q96KN7 1286 aa17.43■□□□□ 0.38
SCAMP4-205ENST00000452128 MFSD14AQ96MC6 490 aa17.43■□□□□ 0.38
SCAMP4-205ENST00000452128 RTP3Q9BQQ7 232 aa17.43■□□□□ 0.38
SCAMP4-205ENST00000452128 TIMM13Q9Y5L4 95 aaPredicted RBP17.43■□□□□ 0.38
SCAMP4-205ENST00000452128 MTCL1Q9Y4B5 1905 aaKnown RBP17.43■□□□□ 0.38
SCAMP4-205ENST00000452128 SCN1AP35498 2009 aa17.42■□□□□ 0.38
SCAMP4-205ENST00000452128 ARHGEF37A1IGU5 675 aa17.42■□□□□ 0.38
SCAMP4-205ENST00000452128 C2CD4DB7Z1M9 353 aa17.42■□□□□ 0.38
SCAMP4-205ENST00000452128 H7C4K7 107 aa17.42■□□□□ 0.38
SCAMP4-205ENST00000452128 SEC24AO95486 1093 aa17.42■□□□□ 0.38
SCAMP4-205ENST00000452128 HNRNPA1P09651 372 aaKnown RBP eCLIP17.42■□□□□ 0.38
SCAMP4-205ENST00000452128 ATF2P15336 505 aa17.42■□□□□ 0.38
SCAMP4-205ENST00000452128 ZDHHC14Q8IZN3 488 aa17.42■□□□□ 0.38
SCAMP4-205ENST00000452128 OR5B17Q8NGF7 314 aa17.42■□□□□ 0.38
SCAMP4-205ENST00000452128 PLEKHO2Q8TD55 490 aa17.42■□□□□ 0.38
SCAMP4-205ENST00000452128 EXOC1Q9NV70 894 aa17.42■□□□□ 0.38
SCAMP4-205ENST00000452128 INTS13Q9NVM9 706 aa17.42■□□□□ 0.38
SCAMP4-205ENST00000452128 CLDN10P78369 228 aa17.41■□□□□ 0.38
SCAMP4-205ENST00000452128 PSMD6Q15008 389 aa17.41■□□□□ 0.38
SCAMP4-205ENST00000452128 SNRNP35Q16560 246 aaKnown RBP17.41■□□□□ 0.38
SCAMP4-205ENST00000452128 CTXN3Q4LDR2 81 aa17.41■□□□□ 0.38
SCAMP4-205ENST00000452128 TPGS2Q68CL5 300 aa17.41■□□□□ 0.38
SCAMP4-205ENST00000452128 ELOA2Q8IYF1 753 aaPredicted RBP17.41■□□□□ 0.38
SCAMP4-205ENST00000452128 TCEAL8Q8IYN2 117 aa17.41■□□□□ 0.38
SCAMP4-205ENST00000452128 XXYLT1Q8NBI6 393 aa17.41■□□□□ 0.38
SCAMP4-205ENST00000452128 SMG7Q92540 1137 aaKnown RBP17.41■□□□□ 0.38
SCAMP4-205ENST00000452128 ZNF516Q92618 1163 aa17.41■□□□□ 0.38
SCAMP4-205ENST00000452128 MAFFQ9ULX9 164 aa17.41■□□□□ 0.38
SCAMP4-205ENST00000452128 PDXKO00764 312 aa17.4■□□□□ 0.38
SCAMP4-205ENST00000452128 C8AP07357 584 aa17.4■□□□□ 0.38
SCAMP4-205ENST00000452128 TFAMQ00059 246 aaKnown RBP17.4■□□□□ 0.38
SCAMP4-205ENST00000452128 YWHAHQ04917 246 aaPredicted RBP17.4■□□□□ 0.38
SCAMP4-205ENST00000452128 FAM160A1Q05DH4 1040 aa17.4■□□□□ 0.38
SCAMP4-205ENST00000452128 CYP24A1Q07973 514 aa17.4■□□□□ 0.38
SCAMP4-205ENST00000452128 MYBPC2Q14324 1141 aa17.4■□□□□ 0.38
SCAMP4-205ENST00000452128 LRRC52Q8N7C0 313 aa17.4■□□□□ 0.38
SCAMP4-205ENST00000452128 CACTINQ8WUQ7 758 aaKnown RBP17.4■□□□□ 0.38
SCAMP4-205ENST00000452128 TIGD1Q96MW7 591 aa17.4■□□□□ 0.38
SCAMP4-205ENST00000452128 OXCT2Q9BYC2 517 aaPredicted RBP17.4■□□□□ 0.38
SCAMP4-205ENST00000452128 GDAP2Q9NXN4 497 aa17.4■□□□□ 0.38
SCAMP4-205ENST00000452128 AFF4Q9UHB7 1163 aaKnown RBP17.4■□□□□ 0.38
SCAMP4-205ENST00000452128 MUTYHQ9UIF7 546 aa17.4■□□□□ 0.38
SCAMP4-205ENST00000452128 ITGA11Q9UKX5 1188 aa17.4■□□□□ 0.38
SCAMP4-205ENST00000452128 TRAF3IP3Q9Y228 551 aa17.4■□□□□ 0.38
SCAMP4-205ENST00000452128 DOCK6Q96HP0 2047 aa17.4■□□□□ 0.38
SCAMP4-205ENST00000452128 OR6C75A6NL08 312 aa17.39■□□□□ 0.37
SCAMP4-205ENST00000452128 KPNA7A9QM74 516 aa17.39■□□□□ 0.37
SCAMP4-205ENST00000452128 DCXO43602 365 aa17.39■□□□□ 0.37
SCAMP4-205ENST00000452128 GPR37L1O60883 481 aa17.39■□□□□ 0.37
SCAMP4-205ENST00000452128 GADD45BO75293 160 aaPredicted RBP17.39■□□□□ 0.37
SCAMP4-205ENST00000452128 POLR2BP30876 1174 aaKnown RBP17.39■□□□□ 0.37
SCAMP4-205ENST00000452128 TAF6P49848 677 aa17.39■□□□□ 0.37
SCAMP4-205ENST00000452128 CYP2J2P51589 502 aa17.39■□□□□ 0.37
SCAMP4-205ENST00000452128 GPR17Q13304 367 aa17.39■□□□□ 0.37
SCAMP4-205ENST00000452128 SURF1Q15526 300 aa17.39■□□□□ 0.37
SCAMP4-205ENST00000452128 NFIL3Q16649 462 aa17.39■□□□□ 0.37
SCAMP4-205ENST00000452128 ZCWPW2Q504Y3 356 aa17.39■□□□□ 0.37
SCAMP4-205ENST00000452128 ZNF280DQ6N043 979 aa17.39■□□□□ 0.37
SCAMP4-205ENST00000452128 ELMSAN1Q6PJG2 1045 aa17.39■□□□□ 0.37
SCAMP4-205ENST00000452128 POTEHQ6S545 545 aa17.39■□□□□ 0.37
SCAMP4-205ENST00000452128 DSTYKQ6XUX3 929 aa17.39■□□□□ 0.37
SCAMP4-205ENST00000452128 RNF19BQ6ZMZ0 732 aa17.39■□□□□ 0.37
SCAMP4-205ENST00000452128 HS2ST1Q7LGA3 356 aa17.39■□□□□ 0.37
SCAMP4-205ENST00000452128 GUF1Q8N442 669 aaKnown RBP17.39■□□□□ 0.37
SCAMP4-205ENST00000452128 OR10T2Q8NGX3 314 aa17.39■□□□□ 0.37
SCAMP4-205ENST00000452128 GOLGA5Q8TBA6 731 aa17.39■□□□□ 0.37
SCAMP4-205ENST00000452128 SLC7A14Q8TBB6 771 aa17.39■□□□□ 0.37
SCAMP4-205ENST00000452128 TMEM209Q96SK2 561 aa17.39■□□□□ 0.37
SCAMP4-205ENST00000452128 MTMR12Q9C0I1 747 aa17.39■□□□□ 0.37
Retrieved 100 of 20,778 RNA–protein pairs in 57.6 ms