RNA–Protein interactions for RNA: ENST00000451542.5

SMPD4-212, Transcript of sphingomyelin phosphodiesterase 4, humanhuman

TSL 5

Gene SMPD4, Length 796 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMPD4-212ENST00000451542 RAB33AQ14088 237 aa13□□□□□ -0.33
SMPD4-212ENST00000451542 PSMD6Q15008 389 aa13□□□□□ -0.33
SMPD4-212ENST00000451542 SYCE2Q6PIF2 218 aa13□□□□□ -0.33
SMPD4-212ENST00000451542 CD300LGQ6UXG3 332 aa13□□□□□ -0.33
SMPD4-212ENST00000451542 C15orf39Q6ZRI6 1047 aa13□□□□□ -0.33
SMPD4-212ENST00000451542 CCDC149Q6ZUS6 474 aa13□□□□□ -0.33
SMPD4-212ENST00000451542 EFCAB13Q8IY85 973 aa13□□□□□ -0.33
SMPD4-212ENST00000451542 THEM5Q8N1Q8 247 aa13□□□□□ -0.33
SMPD4-212ENST00000451542 CSGALNACT2Q8N6G5 542 aa13□□□□□ -0.33
SMPD4-212ENST00000451542 LRRC52Q8N7C0 313 aa13□□□□□ -0.33
SMPD4-212ENST00000451542 KREMEN2Q8NCW0 462 aa13□□□□□ -0.33
SMPD4-212ENST00000451542 VN1R2Q8NFZ6 395 aa13□□□□□ -0.33
SMPD4-212ENST00000451542 CCDC127Q96BQ5 260 aa13□□□□□ -0.33
SMPD4-212ENST00000451542 KCTD10Q9H3F6 313 aa13□□□□□ -0.33
SMPD4-212ENST00000451542 PIDD1Q9HB75 910 aa13□□□□□ -0.33
SMPD4-212ENST00000451542 MAN1C1Q9NR34 630 aa13□□□□□ -0.33
SMPD4-212ENST00000451542 INTS13Q9NVM9 706 aa13□□□□□ -0.33
SMPD4-212ENST00000451542 AGAP1Q9UPQ3 857 aa13□□□□□ -0.33
SMPD4-212ENST00000451542 USP15Q9Y4E8 981 aaPredicted RBP13□□□□□ -0.33
SMPD4-212ENST00000451542 CDY1Q9Y6F8 540 aa13□□□□□ -0.33
SMPD4-212ENST00000451542 MTCL1Q9Y4B5 1905 aaKnown RBP13□□□□□ -0.33
SMPD4-212ENST00000451542 OR6C75A6NL08 312 aa12.99□□□□□ -0.33
SMPD4-212ENST00000451542 KPNA7A9QM74 516 aa12.99□□□□□ -0.33
SMPD4-212ENST00000451542 PSMA7O14818 248 aa12.99□□□□□ -0.33
SMPD4-212ENST00000451542 TGM5O43548 720 aa12.99□□□□□ -0.33
SMPD4-212ENST00000451542 HUS1O60921 280 aa12.99□□□□□ -0.33
SMPD4-212ENST00000451542 PHACTR2O75167 634 aa12.99□□□□□ -0.33
SMPD4-212ENST00000451542 ITGB3P05106 788 aa12.99□□□□□ -0.33
SMPD4-212ENST00000451542 KRT13P13646 458 aa12.99□□□□□ -0.33
SMPD4-212ENST00000451542 RPL17P18621 184 aaKnown RBP12.99□□□□□ -0.33
SMPD4-212ENST00000451542 POLR2BP30876 1174 aaKnown RBP12.99□□□□□ -0.33
SMPD4-212ENST00000451542 SSTR3P32745 418 aaPredicted RBP12.99□□□□□ -0.33
SMPD4-212ENST00000451542 RBM10P98175 930 aaKnown RBP12.99□□□□□ -0.33
SMPD4-212ENST00000451542 CYP24A1Q07973 514 aa12.99□□□□□ -0.33
SMPD4-212ENST00000451542 TRPC3Q13507 836 aa12.99□□□□□ -0.33
SMPD4-212ENST00000451542 CBX2Q14781 532 aaPredicted RBP12.99□□□□□ -0.33
SMPD4-212ENST00000451542 NFIL3Q16649 462 aa12.99□□□□□ -0.33
SMPD4-212ENST00000451542 UVSSAQ2YD98 709 aa12.99□□□□□ -0.33
SMPD4-212ENST00000451542 RARS2Q5T160 578 aaKnown RBP12.99□□□□□ -0.33
SMPD4-212ENST00000451542 CEP135Q66GS9 1140 aa12.99□□□□□ -0.33
SMPD4-212ENST00000451542 TPGS2Q68CL5 300 aa12.99□□□□□ -0.33
SMPD4-212ENST00000451542 SLC8B1Q6J4K2 584 aa12.99□□□□□ -0.33
SMPD4-212ENST00000451542 CLEC17AQ6ZS10 378 aa12.99□□□□□ -0.33
SMPD4-212ENST00000451542 CMASQ8NFW8 434 aaPredicted RBP12.99□□□□□ -0.33
SMPD4-212ENST00000451542 ZNF461Q8TAF7 563 aa12.99□□□□□ -0.33
SMPD4-212ENST00000451542 SENP8Q96LD8 212 aa12.99□□□□□ -0.33
SMPD4-212ENST00000451542 CLSTN3Q9BQT9 956 aa12.99□□□□□ -0.33
SMPD4-212ENST00000451542 ZDHHC7Q9NXF8 308 aa12.99□□□□□ -0.33
SMPD4-212ENST00000451542 MAFFQ9ULX9 164 aa12.99□□□□□ -0.33
SMPD4-212ENST00000451542 MAPK8IP1Q9UQF2 711 aa12.99□□□□□ -0.33
SMPD4-212ENST00000451542 VWA8A3KMH1 1905 aa12.99□□□□□ -0.33
SMPD4-212ENST00000451542 DLL1O00548 723 aa12.98□□□□□ -0.33
SMPD4-212ENST00000451542 CYB561D2O14569 222 aa12.98□□□□□ -0.33
SMPD4-212ENST00000451542 CETN3O15182 167 aa12.98□□□□□ -0.33
SMPD4-212ENST00000451542 MAPK13O15264 365 aa12.98□□□□□ -0.33
SMPD4-212ENST00000451542 XYLBO75191 536 aa12.98□□□□□ -0.33
SMPD4-212ENST00000451542 OAZ2O95190 189 aa12.98□□□□□ -0.33
SMPD4-212ENST00000451542 HNRNPA1P09651 372 aaKnown RBP eCLIP12.98□□□□□ -0.33
SMPD4-212ENST00000451542 CPB1P15086 417 aa12.98□□□□□ -0.33
SMPD4-212ENST00000451542 NR2F2P24468 414 aa12.98□□□□□ -0.33
SMPD4-212ENST00000451542 PSMC2P35998 433 aaKnown RBP12.98□□□□□ -0.33
SMPD4-212ENST00000451542 ARPP19P56211 112 aa12.98□□□□□ -0.33
SMPD4-212ENST00000451542 ADAM9Q13443 819 aa12.98□□□□□ -0.33
SMPD4-212ENST00000451542 EDRF1Q3B7T1 1238 aa12.98□□□□□ -0.33
SMPD4-212ENST00000451542 COBLL1Q53SF7 1204 aa12.98□□□□□ -0.33
SMPD4-212ENST00000451542 PPM1LQ5SGD2 360 aa12.98□□□□□ -0.33
SMPD4-212ENST00000451542 OVOS1Q6IE37 1185 aa12.98□□□□□ -0.33
SMPD4-212ENST00000451542 GPR149Q86SP6 731 aa12.98□□□□□ -0.33
SMPD4-212ENST00000451542 ADHFE1Q8IWW8 467 aa12.98□□□□□ -0.33
SMPD4-212ENST00000451542 ZSWIM2Q8NEG5 633 aa12.98□□□□□ -0.33
SMPD4-212ENST00000451542 SPATA20Q8TB22 786 aa12.98□□□□□ -0.33
SMPD4-212ENST00000451542 MFSD14AQ96MC6 490 aa12.98□□□□□ -0.33
SMPD4-212ENST00000451542 CGRRF1Q99675 332 aa12.98□□□□□ -0.33
SMPD4-212ENST00000451542 APOL5Q9BWW9 433 aa12.98□□□□□ -0.33
SMPD4-212ENST00000451542 PHF7Q9BWX1 381 aaPredicted RBP12.98□□□□□ -0.33
SMPD4-212ENST00000451542 RHOBTB2Q9BYZ6 727 aa12.98□□□□□ -0.33
SMPD4-212ENST00000451542 MTMR12Q9C0I1 747 aa12.98□□□□□ -0.33
SMPD4-212ENST00000451542 S1PR5Q9H228 398 aa12.98□□□□□ -0.33
SMPD4-212ENST00000451542 DMAC2Q9NW81 257 aa12.98□□□□□ -0.33
SMPD4-212ENST00000451542 FBXL5Q9UKA1 691 aa12.98□□□□□ -0.33
SMPD4-212ENST00000451542 FBXW11Q9UKB1 542 aa12.98□□□□□ -0.33
SMPD4-212ENST00000451542 NR2E1Q9Y466 385 aa12.98□□□□□ -0.33
SMPD4-212ENST00000451542 NCOR1O75376 2440 aa12.98□□□□□ -0.33
SMPD4-212ENST00000451542 CCDC195A0A1B0GUA6 201 aa12.97□□□□□ -0.33
SMPD4-212ENST00000451542 PRRG1O14668 218 aa12.97□□□□□ -0.33
SMPD4-212ENST00000451542 ZMYND10O75800 440 aa12.97□□□□□ -0.33
SMPD4-212ENST00000451542 CLSTN1O94985 981 aa12.97□□□□□ -0.33
SMPD4-212ENST00000451542 HOXA9P31269 272 aa12.97□□□□□ -0.33
SMPD4-212ENST00000451542 ROR1Q01973 937 aa12.97□□□□□ -0.33
SMPD4-212ENST00000451542 LRRC63Q05C16 580 aa12.97□□□□□ -0.33
SMPD4-212ENST00000451542 BFSP1Q12934 665 aa12.97□□□□□ -0.33
SMPD4-212ENST00000451542 BIRC3Q13489 604 aa12.97□□□□□ -0.33
SMPD4-212ENST00000451542 MRPL58Q14197 206 aaKnown RBP12.97□□□□□ -0.33
SMPD4-212ENST00000451542 LILRA6Q6PI73 481 aa12.97□□□□□ -0.33
SMPD4-212ENST00000451542 TMC5Q6UXY8 1006 aa12.97□□□□□ -0.33
SMPD4-212ENST00000451542 INTS8Q75QN2 995 aaKnown RBP12.97□□□□□ -0.33
SMPD4-212ENST00000451542 DPH6Q7L8W6 267 aa12.97□□□□□ -0.33
SMPD4-212ENST00000451542 TRAPPC11Q7Z392 1133 aa12.97□□□□□ -0.33
SMPD4-212ENST00000451542 GJD3Q8N144 294 aa12.97□□□□□ -0.33
SMPD4-212ENST00000451542 TMEM86AQ8N2M4 240 aa12.97□□□□□ -0.33
Retrieved 100 of 20,778 RNA–protein pairs in 33.4 ms