RNA–Protein interactions for RNA: ENST00000449744.1

CHD3-205, Transcript of chromodomain helicase DNA binding protein 3, humanhuman

TSL 2

Gene CHD3, Length 880 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHD3-205ENST00000449744 MAFFQ9ULX9 164 aa16.56■□□□□ 0.24
CHD3-205ENST00000449744 MRPS23Q9Y3D9 190 aaKnown RBP16.56■□□□□ 0.24
CHD3-205ENST00000449744 C2CD2Q9Y426 696 aa16.56■□□□□ 0.24
CHD3-205ENST00000449744 NUMBLQ9Y6R0 609 aa16.56■□□□□ 0.24
CHD3-205ENST00000449744 MYH15Q9Y2K3 1946 aa16.56■□□□□ 0.24
CHD3-205ENST00000449744 ANHXE9PGG2 379 aa16.55■□□□□ 0.24
CHD3-205ENST00000449744 OAZ2O95190 189 aa16.55■□□□□ 0.24
CHD3-205ENST00000449744 ODC1P11926 461 aa16.55■□□□□ 0.24
CHD3-205ENST00000449744 RFX1P22670 979 aa16.55■□□□□ 0.24
CHD3-205ENST00000449744 NUBP1P53384 320 aa16.55■□□□□ 0.24
CHD3-205ENST00000449744 POU5F1Q01860 360 aaKnown RBP16.55■□□□□ 0.24
CHD3-205ENST00000449744 ADCY1Q08828 1119 aa16.55■□□□□ 0.24
CHD3-205ENST00000449744 KCNA1Q09470 495 aa16.55■□□□□ 0.24
CHD3-205ENST00000449744 HTR4Q13639 388 aa16.55■□□□□ 0.24
CHD3-205ENST00000449744 C9orf57Q5W0N0 161 aa16.55■□□□□ 0.24
CHD3-205ENST00000449744 ASTLQ6HA08 431 aaPredicted RBP16.55■□□□□ 0.24
CHD3-205ENST00000449744 IQCEQ6IPM2 695 aa16.55■□□□□ 0.24
CHD3-205ENST00000449744 STXBP4Q6ZWJ1 553 aa16.55■□□□□ 0.24
CHD3-205ENST00000449744 SIX5Q8N196 739 aa16.55■□□□□ 0.24
CHD3-205ENST00000449744 ELMOD1Q8N336 334 aa16.55■□□□□ 0.24
CHD3-205ENST00000449744 ST13P5Q8NFI4 369 aaPredicted RBP16.55■□□□□ 0.24
CHD3-205ENST00000449744 KCNG4Q8TDN1 519 aa16.55■□□□□ 0.24
CHD3-205ENST00000449744 DHX58Q96C10 678 aa16.55■□□□□ 0.24
CHD3-205ENST00000449744 TMEM206Q9H813 350 aa16.55■□□□□ 0.24
CHD3-205ENST00000449744 WNT16Q9UBV4 365 aa16.55■□□□□ 0.24
CHD3-205ENST00000449744 INSL5Q9Y5Q6 135 aa16.55■□□□□ 0.24
CHD3-205ENST00000449744 DOCK8Q8NF50 2099 aa16.55■□□□□ 0.24
CHD3-205ENST00000449744 KMT2EQ8IZD2 1858 aa16.54■□□□□ 0.24
CHD3-205ENST00000449744 FRMD3A2A2Y4 597 aa16.54■□□□□ 0.24
CHD3-205ENST00000449744 OR6C75A6NL08 312 aa16.54■□□□□ 0.24
CHD3-205ENST00000449744 STK25O00506 426 aa16.54■□□□□ 0.24
CHD3-205ENST00000449744 PPEF2O14830 753 aa16.54■□□□□ 0.24
CHD3-205ENST00000449744 IL18RAPO95256 599 aa16.54■□□□□ 0.24
CHD3-205ENST00000449744 SEC24AO95486 1093 aa16.54■□□□□ 0.24
CHD3-205ENST00000449744 LDHAP00338 332 aaKnown RBP16.54■□□□□ 0.24
CHD3-205ENST00000449744 RHOP08100 348 aa16.54■□□□□ 0.24
CHD3-205ENST00000449744 TYMPP19971 482 aa16.54■□□□□ 0.24
CHD3-205ENST00000449744 ADSSP30520 456 aa16.54■□□□□ 0.24
CHD3-205ENST00000449744 CLCN5P51795 746 aa16.54■□□□□ 0.24
CHD3-205ENST00000449744 CASP5P51878 434 aa16.54■□□□□ 0.24
CHD3-205ENST00000449744 LILRA4P59901 499 aa16.54■□□□□ 0.24
CHD3-205ENST00000449744 OVOS1Q6IE37 1185 aa16.54■□□□□ 0.24
CHD3-205ENST00000449744 PARM1Q6UWI2 310 aa16.54■□□□□ 0.24
CHD3-205ENST00000449744 IQUBQ8NA54 791 aa16.54■□□□□ 0.24
CHD3-205ENST00000449744 ING5Q8WYH8 240 aa16.54■□□□□ 0.24
CHD3-205ENST00000449744 SENP8Q96LD8 212 aa16.54■□□□□ 0.24
CHD3-205ENST00000449744 ZNF512Q96ME7 567 aaPredicted RBP16.54■□□□□ 0.24
CHD3-205ENST00000449744 CORO1BQ9BR76 489 aa16.54■□□□□ 0.24
CHD3-205ENST00000449744 FAM213AQ9BRX8 229 aa16.54■□□□□ 0.24
CHD3-205ENST00000449744 IRF2BPLQ9H1B7 796 aa16.54■□□□□ 0.24
CHD3-205ENST00000449744 DPP3Q9NY33 737 aa16.54■□□□□ 0.24
CHD3-205ENST00000449744 CFAP45Q9UL16 551 aa16.54■□□□□ 0.24
CHD3-205ENST00000449744 ZDBF2Q9HCK1 2354 aa16.53■□□□□ 0.24
CHD3-205ENST00000449744 PIRO00625 290 aa16.53■□□□□ 0.24
CHD3-205ENST00000449744 ZNF197O14709 1029 aa16.53■□□□□ 0.24
CHD3-205ENST00000449744 PRPF6O94906 941 aaKnown RBP16.53■□□□□ 0.24
CHD3-205ENST00000449744 GARTP22102 1010 aa16.53■□□□□ 0.24
CHD3-205ENST00000449744 ME1P48163 572 aa16.53■□□□□ 0.24
CHD3-205ENST00000449744 CYP4A22Q5TCH4 519 aa16.53■□□□□ 0.24
CHD3-205ENST00000449744 ATL3Q6DD88 541 aa16.53■□□□□ 0.24
CHD3-205ENST00000449744 ARMCX5Q6P1M9 558 aa16.53■□□□□ 0.24
CHD3-205ENST00000449744 SHC4Q6S5L8 630 aa16.53■□□□□ 0.24
CHD3-205ENST00000449744 CRELD2Q6UXH1 353 aaPredicted RBP16.53■□□□□ 0.24
CHD3-205ENST00000449744 RNF19BQ6ZMZ0 732 aa16.53■□□□□ 0.24
CHD3-205ENST00000449744 NT5DC4Q86YG4 428 aa16.53■□□□□ 0.24
CHD3-205ENST00000449744 NPAS3Q8IXF0 933 aa16.53■□□□□ 0.24
CHD3-205ENST00000449744 TMEM105Q8N8V8 129 aa16.53■□□□□ 0.24
CHD3-205ENST00000449744 NOC3LQ8WTT2 800 aaKnown RBP16.53■□□□□ 0.24
CHD3-205ENST00000449744 FGF14Q92915 247 aa16.53■□□□□ 0.24
CHD3-205ENST00000449744 SAAL1Q96ER3 474 aa16.53■□□□□ 0.24
CHD3-205ENST00000449744 KBTBD4Q9NVX7 518 aa16.53■□□□□ 0.24
CHD3-205ENST00000449744 FAM13BQ9NYF5 915 aa16.53■□□□□ 0.24
CHD3-205ENST00000449744 CA14Q9ULX7 337 aa16.53■□□□□ 0.24
CHD3-205ENST00000449744 DOCK6Q96HP0 2047 aa16.53■□□□□ 0.24
CHD3-205ENST00000449744 ANO9A1A5B4 782 aa16.52■□□□□ 0.24
CHD3-205ENST00000449744 OR4Q2P0C623 313 aa16.52■□□□□ 0.24
CHD3-205ENST00000449744 TAF6P49848 677 aa16.52■□□□□ 0.24
CHD3-205ENST00000449744 ASIC1P78348 528 aa16.52■□□□□ 0.24
CHD3-205ENST00000449744 TWF1Q12792 350 aa16.52■□□□□ 0.24
CHD3-205ENST00000449744 TCF15Q12870 199 aa16.52■□□□□ 0.24
CHD3-205ENST00000449744 E2F4Q16254 413 aa16.52■□□□□ 0.24
CHD3-205ENST00000449744 CWF19L1Q69YN2 538 aaKnown RBP16.52■□□□□ 0.24
CHD3-205ENST00000449744 PDZD4Q76G19 769 aaPredicted RBP16.52■□□□□ 0.24
CHD3-205ENST00000449744 METTL23Q86XA0 190 aa16.52■□□□□ 0.24
CHD3-205ENST00000449744 GPR152Q8TDT2 470 aa16.52■□□□□ 0.24
CHD3-205ENST00000449744 MCRS1Q96EZ8 462 aa16.52■□□□□ 0.24
CHD3-205ENST00000449744 PGLYRP2Q96PD5 576 aa16.52■□□□□ 0.24
CHD3-205ENST00000449744 RTP3Q9BQQ7 232 aa16.52■□□□□ 0.24
CHD3-205ENST00000449744 RPP25Q9BUL9 199 aaKnown RBP16.52■□□□□ 0.24
CHD3-205ENST00000449744 FGFBP2Q9BYJ0 223 aa16.52■□□□□ 0.24
CHD3-205ENST00000449744 TRIM9Q9C026 710 aa16.52■□□□□ 0.24
CHD3-205ENST00000449744 AVENQ9NQS1 362 aaPredicted RBP16.52■□□□□ 0.24
CHD3-205ENST00000449744 RBAKQ9NYW8 714 aaPredicted RBP16.52■□□□□ 0.24
CHD3-205ENST00000449744 DSEQ9UL01 958 aa16.52■□□□□ 0.24
CHD3-205ENST00000449744 GOLGA8IPA6NC78 632 aa16.51■□□□□ 0.23
CHD3-205ENST00000449744 GOLGA8JA6NMD2 632 aa16.51■□□□□ 0.23
CHD3-205ENST00000449744 SPTLC1O15269 473 aa16.51■□□□□ 0.23
CHD3-205ENST00000449744 GALR2O43603 387 aaPredicted RBP16.51■□□□□ 0.23
CHD3-205ENST00000449744 NPR3P17342 541 aa16.51■□□□□ 0.23
CHD3-205ENST00000449744 AOC1P19801 751 aa16.51■□□□□ 0.23
Retrieved 100 of 20,778 RNA–protein pairs in 42.5 ms