RNA–Protein interactions for RNA: ENST00000449530.2

LSP1P3-201, Transcript of LSP1 pseudogene 3, humanhuman

BASIC

Gene LSP1P3, Length 208 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LSP1P3-201ENST00000449530 LILRA6Q6PI73 481 aa12.91□□□□□ -0.34
LSP1P3-201ENST00000449530 DSTYKQ6XUX3 929 aa12.91□□□□□ -0.34
LSP1P3-201ENST00000449530 C15orf39Q6ZRI6 1047 aa12.91□□□□□ -0.34
LSP1P3-201ENST00000449530 CCDC149Q6ZUS6 474 aa12.91□□□□□ -0.34
LSP1P3-201ENST00000449530 HS2ST1Q7LGA3 356 aa12.91□□□□□ -0.34
LSP1P3-201ENST00000449530 RNF135Q8IUD6 432 aa12.91□□□□□ -0.34
LSP1P3-201ENST00000449530 CBWD2Q8IUF1 395 aa12.91□□□□□ -0.34
LSP1P3-201ENST00000449530 APPL2Q8NEU8 664 aa12.91□□□□□ -0.34
LSP1P3-201ENST00000449530 HDAC7Q8WUI4 952 aa12.91□□□□□ -0.34
LSP1P3-201ENST00000449530 SMG7Q92540 1137 aaKnown RBP12.91□□□□□ -0.34
LSP1P3-201ENST00000449530 ZNF707Q96C28 371 aaPredicted RBP12.91□□□□□ -0.34
LSP1P3-201ENST00000449530 ZDHHC7Q9NXF8 308 aa12.91□□□□□ -0.34
LSP1P3-201ENST00000449530 MUTYHQ9UIF7 546 aa12.91□□□□□ -0.34
LSP1P3-201ENST00000449530 FBXL5Q9UKA1 691 aa12.91□□□□□ -0.34
LSP1P3-201ENST00000449530 TIMM13Q9Y5L4 95 aaPredicted RBP12.91□□□□□ -0.34
LSP1P3-201ENST00000449530 ANO9A1A5B4 782 aa12.9□□□□□ -0.34
LSP1P3-201ENST00000449530 C2CD4DB7Z1M9 353 aa12.9□□□□□ -0.34
LSP1P3-201ENST00000449530 M0QZQ0 153 aa12.9□□□□□ -0.34
LSP1P3-201ENST00000449530 SPTLC1O15269 473 aa12.9□□□□□ -0.34
LSP1P3-201ENST00000449530 ZMYND10O75800 440 aa12.9□□□□□ -0.34
LSP1P3-201ENST00000449530 ZNF202O95125 648 aa12.9□□□□□ -0.34
LSP1P3-201ENST00000449530 RPN1P04843 607 aaKnown RBP12.9□□□□□ -0.34
LSP1P3-201ENST00000449530 ODC1P11926 461 aa12.9□□□□□ -0.34
LSP1P3-201ENST00000449530 ALADP13716 330 aa12.9□□□□□ -0.34
LSP1P3-201ENST00000449530 ANP32AP39687 249 aaKnown RBP12.9□□□□□ -0.34
LSP1P3-201ENST00000449530 LILRA4P59901 499 aa12.9□□□□□ -0.34
LSP1P3-201ENST00000449530 YWHAHQ04917 246 aaPredicted RBP12.9□□□□□ -0.34
LSP1P3-201ENST00000449530 STK4Q13043 487 aa12.9□□□□□ -0.34
LSP1P3-201ENST00000449530 PPM1LQ5SGD2 360 aa12.9□□□□□ -0.34
LSP1P3-201ENST00000449530 LMBRD2Q68DH5 695 aaPredicted RBP12.9□□□□□ -0.34
LSP1P3-201ENST00000449530 SLC8B1Q6J4K2 584 aa12.9□□□□□ -0.34
LSP1P3-201ENST00000449530 USP37Q86T82 979 aa12.9□□□□□ -0.34
LSP1P3-201ENST00000449530 NT5DC4Q86YG4 428 aa12.9□□□□□ -0.34
LSP1P3-201ENST00000449530 TDRD5Q8NAT2 981 aaKnown RBP12.9□□□□□ -0.34
LSP1P3-201ENST00000449530 SLC7A14Q8TBB6 771 aa12.9□□□□□ -0.34
LSP1P3-201ENST00000449530 CCDC47Q96A33 483 aaKnown RBP12.9□□□□□ -0.34
LSP1P3-201ENST00000449530 ZNF560Q96MR9 790 aa12.9□□□□□ -0.34
LSP1P3-201ENST00000449530 MTMR12Q9C0I1 747 aa12.9□□□□□ -0.34
LSP1P3-201ENST00000449530 PIDD1Q9HB75 910 aa12.9□□□□□ -0.34
LSP1P3-201ENST00000449530 PDE11AQ9HCR9 933 aa12.9□□□□□ -0.34
LSP1P3-201ENST00000449530 CIZ1Q9ULV3 898 aaPredicted RBP12.9□□□□□ -0.34
LSP1P3-201ENST00000449530 NR2E1Q9Y466 385 aa12.9□□□□□ -0.34
LSP1P3-201ENST00000449530 CLUHO75153 1309 aa12.89□□□□□ -0.35
LSP1P3-201ENST00000449530 PTPRJQ12913 1337 aa12.89□□□□□ -0.35
LSP1P3-201ENST00000449530 WDR27A2RRH5 827 aa12.89□□□□□ -0.35
LSP1P3-201ENST00000449530 PIRO00625 290 aa12.89□□□□□ -0.35
LSP1P3-201ENST00000449530 CCL16O15467 120 aa12.89□□□□□ -0.35
LSP1P3-201ENST00000449530 DCXO43602 365 aa12.89□□□□□ -0.35
LSP1P3-201ENST00000449530 ITGB3P05106 788 aa12.89□□□□□ -0.35
LSP1P3-201ENST00000449530 TMEM191BP0C7N4 346 aa12.89□□□□□ -0.35
LSP1P3-201ENST00000449530 CPB1P15086 417 aa12.89□□□□□ -0.35
LSP1P3-201ENST00000449530 POLR2BP30876 1174 aaKnown RBP12.89□□□□□ -0.35
LSP1P3-201ENST00000449530 TAF6P49848 677 aa12.89□□□□□ -0.35
LSP1P3-201ENST00000449530 DPYDQ12882 1025 aa12.89□□□□□ -0.35
LSP1P3-201ENST00000449530 PSMD2Q13200 908 aa12.89□□□□□ -0.35
LSP1P3-201ENST00000449530 MRPL58Q14197 206 aaKnown RBP12.89□□□□□ -0.35
LSP1P3-201ENST00000449530 SNRNP35Q16560 246 aaKnown RBP12.89□□□□□ -0.35
LSP1P3-201ENST00000449530 KNOP1Q1ED39 458 aaKnown RBP12.89□□□□□ -0.35
LSP1P3-201ENST00000449530 OVOS1Q6IE37 1185 aa12.89□□□□□ -0.35
LSP1P3-201ENST00000449530 SENP8Q96LD8 212 aa12.89□□□□□ -0.35
LSP1P3-201ENST00000449530 KCNH6Q9H252 994 aa12.89□□□□□ -0.35
LSP1P3-201ENST00000449530 DOCK6Q96HP0 2047 aa12.89□□□□□ -0.35
LSP1P3-201ENST00000449530 ZNF233A6NK53 670 aa12.88□□□□□ -0.35
LSP1P3-201ENST00000449530 PRRG1O14668 218 aa12.88□□□□□ -0.35
LSP1P3-201ENST00000449530 TBC1D4O60343 1298 aa12.88□□□□□ -0.35
LSP1P3-201ENST00000449530 KRT19P08727 400 aa12.88□□□□□ -0.35
LSP1P3-201ENST00000449530 HNRNPA1P09651 372 aaKnown RBP eCLIP12.88□□□□□ -0.35
LSP1P3-201ENST00000449530 OR4Q2P0C623 313 aa12.88□□□□□ -0.35
LSP1P3-201ENST00000449530 TYMPP19971 482 aa12.88□□□□□ -0.35
LSP1P3-201ENST00000449530 SNRPFP62306 86 aaKnown RBP12.88□□□□□ -0.35
LSP1P3-201ENST00000449530 FAM160A1Q05DH4 1040 aa12.88□□□□□ -0.35
LSP1P3-201ENST00000449530 BFSP1Q12934 665 aa12.88□□□□□ -0.35
LSP1P3-201ENST00000449530 SV2CQ496J9 727 aa12.88□□□□□ -0.35
LSP1P3-201ENST00000449530 CYP26C1Q6V0L0 522 aa12.88□□□□□ -0.35
LSP1P3-201ENST00000449530 GET4Q7L5D6 327 aaPredicted RBP12.88□□□□□ -0.35
LSP1P3-201ENST00000449530 FMR1NBQ8N0W7 255 aaPredicted RBP12.88□□□□□ -0.35
LSP1P3-201ENST00000449530 C1orf127Q8N9H9 656 aa12.88□□□□□ -0.35
LSP1P3-201ENST00000449530 XXYLT1Q8NBI6 393 aa12.88□□□□□ -0.35
LSP1P3-201ENST00000449530 RDH13Q8NBN7 331 aa12.88□□□□□ -0.35
LSP1P3-201ENST00000449530 CACTINQ8WUQ7 758 aaKnown RBP12.88□□□□□ -0.35
LSP1P3-201ENST00000449530 CCDC34Q96HJ3 373 aa12.88□□□□□ -0.35
LSP1P3-201ENST00000449530 PRKD2Q9BZL6 878 aa12.88□□□□□ -0.35
LSP1P3-201ENST00000449530 KIAA1586Q9HCI6 787 aa12.88□□□□□ -0.35
LSP1P3-201ENST00000449530 WDR6Q9NNW5 1121 aaKnown RBP12.88□□□□□ -0.35
LSP1P3-201ENST00000449530 POLIQ9UNA4 740 aa12.88□□□□□ -0.35
LSP1P3-201ENST00000449530 AGAP1Q9UPQ3 857 aa12.88□□□□□ -0.35
LSP1P3-201ENST00000449530 DOCK8Q8NF50 2099 aa12.88□□□□□ -0.35
LSP1P3-201ENST00000449530 ARHGEF37A1IGU5 675 aa12.87□□□□□ -0.35
LSP1P3-201ENST00000449530 EXOC3O60645 756 aa12.87□□□□□ -0.35
LSP1P3-201ENST00000449530 XYLBO75191 536 aa12.87□□□□□ -0.35
LSP1P3-201ENST00000449530 RHOBTB3O94955 611 aa12.87□□□□□ -0.35
LSP1P3-201ENST00000449530 OAZ2O95190 189 aa12.87□□□□□ -0.35
LSP1P3-201ENST00000449530 PAPLNO95428 1278 aa12.87□□□□□ -0.35
LSP1P3-201ENST00000449530 DLATP10515 647 aaKnown RBP12.87□□□□□ -0.35
LSP1P3-201ENST00000449530 PAX3P23760 479 aa12.87□□□□□ -0.35
LSP1P3-201ENST00000449530 HOXA9P31269 272 aa12.87□□□□□ -0.35
LSP1P3-201ENST00000449530 CYP24A1Q07973 514 aa12.87□□□□□ -0.35
LSP1P3-201ENST00000449530 PNOCQ13519 176 aa12.87□□□□□ -0.35
LSP1P3-201ENST00000449530 C12orf56Q8IXR9 622 aa12.87□□□□□ -0.35
LSP1P3-201ENST00000449530 OR5B17Q8NGF7 314 aa12.87□□□□□ -0.35
Retrieved 100 of 20,778 RNA–protein pairs in 21.8 ms