RNA–Protein interactions for RNA: ENST00000449049.7

SHMT2-203, Transcript of serine hydroxymethyltransferase 2, humanhuman

TSL 2 BASIC

Gene SHMT2, Length 2,121 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHMT2-203ENST00000449049 UBE2TQ9NPD8 197 aaPredicted RBP15.09■□□□□ 0.01
SHMT2-203ENST00000449049 DNAJB4Q9UDY4 337 aa15.09■□□□□ 0.01
SHMT2-203ENST00000449049 TMEM189-UBE2V1I3L0A0 370 aa15.08■□□□□ 0.01
SHMT2-203ENST00000449049 TPM1P09493 284 aa15.08■□□□□ 0.01
SHMT2-203ENST00000449049 TBXAS1P24557 533 aaPredicted RBP15.08■□□□□ 0.01
SHMT2-203ENST00000449049 ASPAP45381 313 aa15.08■□□□□ 0.01
SHMT2-203ENST00000449049 JAM2P57087 298 aa15.08■□□□□ 0.01
SHMT2-203ENST00000449049 LILRA4P59901 499 aa15.08■□□□□ 0.01
SHMT2-203ENST00000449049 CUL2Q13617 745 aa15.08■□□□□ 0.01
SHMT2-203ENST00000449049 WDR72Q3MJ13 1102 aa15.08■□□□□ 0.01
SHMT2-203ENST00000449049 FAM117BQ6P1L5 589 aa15.08■□□□□ 0.01
SHMT2-203ENST00000449049 CD300LGQ6UXG3 332 aa15.08■□□□□ 0.01
SHMT2-203ENST00000449049 CACNA2D4Q7Z3S7 1137 aa15.08■□□□□ 0.01
SHMT2-203ENST00000449049 C3orf58Q8NDZ4 430 aa15.08■□□□□ 0.01
SHMT2-203ENST00000449049 KAT5Q92993 513 aa15.08■□□□□ 0.01
SHMT2-203ENST00000449049 KREMEN1Q96MU8 473 aa15.08■□□□□ 0.01
SHMT2-203ENST00000449049 CWH43Q9H720 699 aa15.08■□□□□ 0.01
SHMT2-203ENST00000449049 NLRC4Q9NPP4 1024 aa15.08■□□□□ 0.01
SHMT2-203ENST00000449049 GDAP2Q9NXN4 497 aa15.08■□□□□ 0.01
SHMT2-203ENST00000449049 HCSTQ9UBK5 93 aa15.08■□□□□ 0.01
SHMT2-203ENST00000449049 KPNA7A9QM74 516 aa15.08■□□□□ 0
SHMT2-203ENST00000449049 SPTLC1O15269 473 aa15.08■□□□□ 0
SHMT2-203ENST00000449049 MFAP3LO75121 409 aa15.08■□□□□ 0
SHMT2-203ENST00000449049 PAX3P23760 479 aa15.08■□□□□ 0
SHMT2-203ENST00000449049 MFAP3P55082 362 aa15.08■□□□□ 0
SHMT2-203ENST00000449049 ZBED6P86452 979 aa15.08■□□□□ 0
SHMT2-203ENST00000449049 ARID5BQ14865 1188 aa15.08■□□□□ 0
SHMT2-203ENST00000449049 DCLRE1AQ6PJP8 1040 aa15.08■□□□□ 0
SHMT2-203ENST00000449049 HERC6Q8IVU3 1022 aa15.08■□□□□ 0
SHMT2-203ENST00000449049 CPLX3Q8WVH0 158 aa15.08■□□□□ 0
SHMT2-203ENST00000449049 JAKMIP2Q96AA8 810 aa15.08■□□□□ 0
SHMT2-203ENST00000449049 STK33Q9BYT3 514 aa15.08■□□□□ 0
SHMT2-203ENST00000449049 BCO2Q9BYV7 579 aa15.08■□□□□ 0
SHMT2-203ENST00000449049 GPR88Q9GZN0 384 aa15.08■□□□□ 0
SHMT2-203ENST00000449049 MYO6Q9UM54 1294 aa15.08■□□□□ 0
SHMT2-203ENST00000449049 POLIQ9UNA4 740 aa15.08■□□□□ 0
SHMT2-203ENST00000449049 SCN1AP35498 2009 aa15.08■□□□□ 0
SHMT2-203ENST00000449049 GOLGA6L6A8MZA4 724 aa15.07■□□□□ 0
SHMT2-203ENST00000449049 CLSTN1O94985 981 aa15.07■□□□□ 0
SHMT2-203ENST00000449049 P4HA1P13674 534 aa15.07■□□□□ 0
SHMT2-203ENST00000449049 IGFBP6P24592 240 aaPredicted RBP15.07■□□□□ 0
SHMT2-203ENST00000449049 AARSP49588 968 aaKnown RBP eCLIP15.07■□□□□ 0
SHMT2-203ENST00000449049 TNNC1P63316 161 aa15.07■□□□□ 0
SHMT2-203ENST00000449049 C9orf50Q5SZB4 431 aa15.07■□□□□ 0
SHMT2-203ENST00000449049 SMYD5Q6GMV2 418 aa15.07■□□□□ 0
SHMT2-203ENST00000449049 CNGA4Q8IV77 575 aa15.07■□□□□ 0
SHMT2-203ENST00000449049 UBR7Q8N806 425 aa15.07■□□□□ 0
SHMT2-203ENST00000449049 RABGGTAQ92696 567 aa15.07■□□□□ 0
SHMT2-203ENST00000449049 YME1L1Q96TA2 773 aa15.07■□□□□ 0
SHMT2-203ENST00000449049 ARID3AQ99856 593 aa15.07■□□□□ 0
SHMT2-203ENST00000449049 GDF15Q99988 308 aa15.07■□□□□ 0
SHMT2-203ENST00000449049 NXF1Q9UBU9 619 aaKnown RBP15.07■□□□□ 0
SHMT2-203ENST00000449049 LUC7L2Q9Y383 392 aaKnown RBP15.07■□□□□ 0
SHMT2-203ENST00000449049 AKR1B15C9JRZ8 316 aaPredicted RBP15.07■□□□□ 0
SHMT2-203ENST00000449049 F8VZ95 297 aa15.07■□□□□ 0
SHMT2-203ENST00000449049 KIF4AO95239 1232 aa15.07■□□□□ 0
SHMT2-203ENST00000449049 ATP2A2P16615 1042 aaKnown RBP15.07■□□□□ 0
SHMT2-203ENST00000449049 CLCN1P35523 988 aa15.07■□□□□ 0
SHMT2-203ENST00000449049 RAPGEF1Q13905 1077 aa15.07■□□□□ 0
SHMT2-203ENST00000449049 BTG3Q14201 252 aaPredicted RBP15.07■□□□□ 0
SHMT2-203ENST00000449049 PDXDC1Q6P996 788 aa15.07■□□□□ 0
SHMT2-203ENST00000449049 LIMS2Q7Z4I7 341 aa15.07■□□□□ 0
SHMT2-203ENST00000449049 TC2NQ8N9U0 490 aa15.07■□□□□ 0
SHMT2-203ENST00000449049 ZNF397Q8NF99 534 aaPredicted RBP15.07■□□□□ 0
SHMT2-203ENST00000449049 SHC3Q92529 594 aa15.07■□□□□ 0
SHMT2-203ENST00000449049 SNX9Q9Y5X1 595 aa15.07■□□□□ 0
SHMT2-203ENST00000449049 NRP1O14786 923 aa15.06■□□□□ 0
SHMT2-203ENST00000449049 B3GAT3O94766 335 aa15.06■□□□□ 0
SHMT2-203ENST00000449049 GALTP07902 379 aa15.06■□□□□ 0
SHMT2-203ENST00000449049 KRT9P35527 623 aa15.06■□□□□ 0
SHMT2-203ENST00000449049 OR1G1P47890 313 aa15.06■□□□□ 0
SHMT2-203ENST00000449049 SLC11A1P49279 550 aa15.06■□□□□ 0
SHMT2-203ENST00000449049 GSDMDP57764 484 aa15.06■□□□□ 0
SHMT2-203ENST00000449049 DRAP1Q14919 205 aaPredicted RBP15.06■□□□□ 0
SHMT2-203ENST00000449049 ARHGAP44Q17R89 818 aa15.06■□□□□ 0
SHMT2-203ENST00000449049 SP7Q8TDD2 431 aaPredicted RBP15.06■□□□□ 0
SHMT2-203ENST00000449049 SPAG5Q96R06 1193 aa15.06■□□□□ 0
SHMT2-203ENST00000449049 DNAJC7Q99615 494 aa15.06■□□□□ 0
SHMT2-203ENST00000449049 FAM124BQ9H5Z6 455 aaPredicted RBP15.06■□□□□ 0
SHMT2-203ENST00000449049 CYP3A43Q9HB55 503 aa15.06■□□□□ 0
SHMT2-203ENST00000449049 INSL6Q9Y581 213 aa15.06■□□□□ 0
SHMT2-203ENST00000449049 KIAA1671Q9BY89 1806 aa15.06■□□□□ 0
SHMT2-203ENST00000449049 LRRC53A6NM62 1247 aa15.05■□□□□ 0
SHMT2-203ENST00000449049 H0YGN5 161 aa15.05■□□□□ 0
SHMT2-203ENST00000449049 ALDH2P05091 517 aa15.05■□□□□ 0
SHMT2-203ENST00000449049 ITGB1P05556 798 aa15.05■□□□□ 0
SHMT2-203ENST00000449049 ACO1P21399 889 aaKnown RBP15.05■□□□□ 0
SHMT2-203ENST00000449049 ADKP55263 362 aaKnown RBP15.05■□□□□ 0
SHMT2-203ENST00000449049 BCAR1P56945 870 aa15.05■□□□□ 0
SHMT2-203ENST00000449049 GOLGA8FQ08AF8 430 aa15.05■□□□□ 0
SHMT2-203ENST00000449049 GOLGA8DPQ0D2H9 430 aa15.05■□□□□ 0
SHMT2-203ENST00000449049 SHHQ15465 462 aa15.05■□□□□ 0
SHMT2-203ENST00000449049 SCARA5Q6ZMJ2 495 aa15.05■□□□□ 0
SHMT2-203ENST00000449049 CCDC186Q7Z3E2 898 aa15.05■□□□□ 0
SHMT2-203ENST00000449049 RNPC3Q96LT9 517 aaKnown RBP15.05■□□□□ 0
SHMT2-203ENST00000449049 SDCBP2Q9H190 292 aa15.05■□□□□ 0
SHMT2-203ENST00000449049 NUCKS1Q9H1E3 243 aaKnown RBP15.05■□□□□ 0
SHMT2-203ENST00000449049 SMYD3Q9H7B4 428 aa15.05■□□□□ 0
SHMT2-203ENST00000449049 ABHD10Q9NUJ1 306 aa15.05■□□□□ 0
SHMT2-203ENST00000449049 MARCH5Q9NX47 278 aa15.05■□□□□ 0
Retrieved 100 of 20,778 RNA–protein pairs in 44 ms