RNA–Protein interactions for RNA: ENST00000448971.5

USP39-206, Transcript of ubiquitin specific peptidase 39, humanhuman

TSL 3

Gene USP39, Length 610 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP39-206ENST00000448971 DCLRE1AQ6PJP8 1040 aa15.8■□□□□ 0.12
USP39-206ENST00000448971 OTOP3Q7RTS5 596 aa15.8■□□□□ 0.12
USP39-206ENST00000448971 GLYCTKQ8IVS8 523 aa15.8■□□□□ 0.12
USP39-206ENST00000448971 C3orf58Q8NDZ4 430 aa15.8■□□□□ 0.12
USP39-206ENST00000448971 ACSF2Q96CM8 615 aaPredicted RBP15.8■□□□□ 0.12
USP39-206ENST00000448971 TTPALQ9BTX7 342 aa15.8■□□□□ 0.12
USP39-206ENST00000448971 PCIF1Q9H4Z3 704 aa15.8■□□□□ 0.12
USP39-206ENST00000448971 SFXN1Q9H9B4 322 aa15.8■□□□□ 0.12
USP39-206ENST00000448971 KCNK12Q9HB15 430 aa15.8■□□□□ 0.12
USP39-206ENST00000448971 APOBEC3CQ9NRW3 190 aaKnown RBP eCLIP15.8■□□□□ 0.12
USP39-206ENST00000448971 PDCD11Q14690 1871 aaKnown RBP15.8■□□□□ 0.12
USP39-206ENST00000448971 GOLGA8IPA6NC78 632 aa15.79■□□□□ 0.12
USP39-206ENST00000448971 GOLGA8JA6NMD2 632 aa15.79■□□□□ 0.12
USP39-206ENST00000448971 I3L4J1 428 aa15.79■□□□□ 0.12
USP39-206ENST00000448971 STK25O00506 426 aa15.79■□□□□ 0.12
USP39-206ENST00000448971 TRAPPC3O43617 180 aa15.79■□□□□ 0.12
USP39-206ENST00000448971 KLRC4O43908 158 aa15.79■□□□□ 0.12
USP39-206ENST00000448971 N4BP1O75113 896 aaKnown RBP15.79■□□□□ 0.12
USP39-206ENST00000448971 EFEMP2O95967 443 aa15.79■□□□□ 0.12
USP39-206ENST00000448971 RPN1P04843 607 aaKnown RBP15.79■□□□□ 0.12
USP39-206ENST00000448971 RPL9P32969 192 aaKnown RBP15.79■□□□□ 0.12
USP39-206ENST00000448971 BRCC3P46736 316 aa15.79■□□□□ 0.12
USP39-206ENST00000448971 TMEM132DQ14C87 1099 aa15.79■□□□□ 0.12
USP39-206ENST00000448971 PRSS55Q6UWB4 352 aaPredicted RBP15.79■□□□□ 0.12
USP39-206ENST00000448971 PDZRN4Q6ZMN7 1036 aaPredicted RBP15.79■□□□□ 0.12
USP39-206ENST00000448971 C15orf39Q6ZRI6 1047 aa15.79■□□□□ 0.12
USP39-206ENST00000448971 EPM2AIP1Q7L775 607 aaPredicted RBP15.79■□□□□ 0.12
USP39-206ENST00000448971 HS2ST1Q7LGA3 356 aa15.79■□□□□ 0.12
USP39-206ENST00000448971 GPD1LQ8N335 351 aa15.79■□□□□ 0.12
USP39-206ENST00000448971 FLCNQ8NFG4 579 aa15.79■□□□□ 0.12
USP39-206ENST00000448971 BEST2Q8NFU1 509 aa15.79■□□□□ 0.12
USP39-206ENST00000448971 NKD2Q969F2 451 aaPredicted RBP15.79■□□□□ 0.12
USP39-206ENST00000448971 CHST7Q9NS84 486 aa15.79■□□□□ 0.12
USP39-206ENST00000448971 RBAKQ9NYW8 714 aaPredicted RBP15.79■□□□□ 0.12
USP39-206ENST00000448971 DUSP12Q9UNI6 340 aa15.79■□□□□ 0.12
USP39-206ENST00000448971 DOCK8Q8NF50 2099 aa15.79■□□□□ 0.12
USP39-206ENST00000448971 KIAA0391O15091 583 aaKnown RBP15.78■□□□□ 0.12
USP39-206ENST00000448971 TEX28O15482 410 aa15.78■□□□□ 0.12
USP39-206ENST00000448971 CYP3A5P20815 502 aa15.78■□□□□ 0.12
USP39-206ENST00000448971 GUCY2FP51841 1108 aa15.78■□□□□ 0.12
USP39-206ENST00000448971 FAM160A1Q05DH4 1040 aa15.78■□□□□ 0.12
USP39-206ENST00000448971 PSMD5Q16401 504 aa15.78■□□□□ 0.12
USP39-206ENST00000448971 KIAA0319Q5VV43 1072 aa15.78■□□□□ 0.12
USP39-206ENST00000448971 CCDC149Q6ZUS6 474 aa15.78■□□□□ 0.12
USP39-206ENST00000448971 BRSK2Q8IWQ3 736 aa15.78■□□□□ 0.12
USP39-206ENST00000448971 CCDC105Q8IYK2 499 aa15.78■□□□□ 0.12
USP39-206ENST00000448971 ZNF507Q8TCN5 953 aa15.78■□□□□ 0.12
USP39-206ENST00000448971 SCFD1Q8WVM8 642 aa15.78■□□□□ 0.12
USP39-206ENST00000448971 TSPAN18Q96SJ8 248 aa15.78■□□□□ 0.12
USP39-206ENST00000448971 ASB7Q9H672 318 aa15.78■□□□□ 0.12
USP39-206ENST00000448971 EXTL3O43909 919 aa15.77■□□□□ 0.12
USP39-206ENST00000448971 IL18RAPO95256 599 aa15.77■□□□□ 0.12
USP39-206ENST00000448971 GLUD1P00367 558 aa15.77■□□□□ 0.12
USP39-206ENST00000448971 RPL17P18621 184 aaKnown RBP15.77■□□□□ 0.12
USP39-206ENST00000448971 TKTP29401 623 aaKnown RBP15.77■□□□□ 0.12
USP39-206ENST00000448971 LRPAP1P30533 357 aa15.77■□□□□ 0.12
USP39-206ENST00000448971 DPYDQ12882 1025 aa15.77■□□□□ 0.12
USP39-206ENST00000448971 PSMD2Q13200 908 aa15.77■□□□□ 0.12
USP39-206ENST00000448971 BMT2Q1RMZ1 405 aa15.77■□□□□ 0.12
USP39-206ENST00000448971 PDXDC1Q6P996 788 aa15.77■□□□□ 0.12
USP39-206ENST00000448971 ELMSAN1Q6PJG2 1045 aa15.77■□□□□ 0.12
USP39-206ENST00000448971 CRELD2Q6UXH1 353 aaPredicted RBP15.77■□□□□ 0.12
USP39-206ENST00000448971 ADSSL1Q8N142 457 aa15.77■□□□□ 0.12
USP39-206ENST00000448971 TMEM130Q8N3G9 435 aa15.77■□□□□ 0.12
USP39-206ENST00000448971 KIAA0895Q8NCT3 520 aa15.77■□□□□ 0.12
USP39-206ENST00000448971 ZSWIM2Q8NEG5 633 aa15.77■□□□□ 0.12
USP39-206ENST00000448971 CMASQ8NFW8 434 aaPredicted RBP15.77■□□□□ 0.12
USP39-206ENST00000448971 PIK3R5Q8WYR1 880 aa15.77■□□□□ 0.12
USP39-206ENST00000448971 RTP3Q9BQQ7 232 aa15.77■□□□□ 0.12
USP39-206ENST00000448971 AGPAT3Q9NRZ7 376 aa15.77■□□□□ 0.12
USP39-206ENST00000448971 HSPBP1Q9NZL4 362 aa15.77■□□□□ 0.12
USP39-206ENST00000448971 IGSF9Q9P2J2 1179 aa15.77■□□□□ 0.12
USP39-206ENST00000448971 DERAQ9Y315 318 aa15.77■□□□□ 0.12
USP39-206ENST00000448971 C2CD2Q9Y426 696 aa15.77■□□□□ 0.12
USP39-206ENST00000448971 CACNA1IQ9P0X4 2223 aa15.77■□□□□ 0.12
USP39-206ENST00000448971 TRIP11Q15643 1979 aa15.76■□□□□ 0.11
USP39-206ENST00000448971 OTOGLQ3ZCN5 2332 aa15.76■□□□□ 0.11
USP39-206ENST00000448971 NARSO43776 548 aaKnown RBP15.76■□□□□ 0.11
USP39-206ENST00000448971 ADRB2P07550 413 aa15.76■□□□□ 0.11
USP39-206ENST00000448971 IGFBP6P24592 240 aaPredicted RBP15.76■□□□□ 0.11
USP39-206ENST00000448971 CYP2J2P51589 502 aa15.76■□□□□ 0.11
USP39-206ENST00000448971 POU5F1Q01860 360 aaKnown RBP15.76■□□□□ 0.11
USP39-206ENST00000448971 STK4Q13043 487 aa15.76■□□□□ 0.11
USP39-206ENST00000448971 ANGPT1Q15389 498 aa15.76■□□□□ 0.11
USP39-206ENST00000448971 KNOP1Q1ED39 458 aaKnown RBP15.76■□□□□ 0.11
USP39-206ENST00000448971 SPATA1Q5VX52 437 aa15.76■□□□□ 0.11
USP39-206ENST00000448971 EFCAB13Q8IY85 973 aa15.76■□□□□ 0.11
USP39-206ENST00000448971 GPR65Q8IYL9 337 aa15.76■□□□□ 0.11
USP39-206ENST00000448971 FMR1NBQ8N0W7 255 aaPredicted RBP15.76■□□□□ 0.11
USP39-206ENST00000448971 SIX5Q8N196 739 aa15.76■□□□□ 0.11
USP39-206ENST00000448971 DTWD2Q8NBA8 298 aa15.76■□□□□ 0.11
USP39-206ENST00000448971 RHOBTB2Q9BYZ6 727 aa15.76■□□□□ 0.11
USP39-206ENST00000448971 RXFP1Q9HBX9 757 aa15.76■□□□□ 0.11
USP39-206ENST00000448971 MAN1C1Q9NR34 630 aa15.76■□□□□ 0.11
USP39-206ENST00000448971 FNIP2Q9P278 1114 aa15.76■□□□□ 0.11
USP39-206ENST00000448971 DOCK6Q96HP0 2047 aa15.76■□□□□ 0.11
USP39-206ENST00000448971 DNAH14Q0VDD8 3507 aa15.76■□□□□ 0.11
USP39-206ENST00000448971 CCDC195A0A1B0GUA6 201 aa15.75■□□□□ 0.11
USP39-206ENST00000448971 CLIC2O15247 247 aa15.75■□□□□ 0.11
USP39-206ENST00000448971 TGFB1I1O43294 461 aa15.75■□□□□ 0.11
Retrieved 100 of 20,778 RNA–protein pairs in 21.7 ms