RNA–Protein interactions for RNA: ENST00000448310.1

CBX4-202, Transcript of chromobox 4, humanhuman

APPRIS ALT2 TSL 3 BASIC

Gene CBX4, Length 718 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CBX4-202ENST00000448310 ZNF197O14709 1029 aa30.75■■■□□ 2.51
CBX4-202ENST00000448310 OGTO15294 1046 aa30.75■■■□□ 2.51
CBX4-202ENST00000448310 TRAK2O60296 914 aa30.75■■■□□ 2.51
CBX4-202ENST00000448310 PIGRP01833 764 aa30.75■■■□□ 2.51
CBX4-202ENST00000448310 GJA1P17302 382 aa30.75■■■□□ 2.51
CBX4-202ENST00000448310 CYP3A5P20815 502 aa30.75■■■□□ 2.51
CBX4-202ENST00000448310 CYP4A22Q5TCH4 519 aa30.75■■■□□ 2.51
CBX4-202ENST00000448310 IQCEQ6IPM2 695 aa30.75■■■□□ 2.51
CBX4-202ENST00000448310 SLC39A4Q6P5W5 647 aa30.75■■■□□ 2.51
CBX4-202ENST00000448310 MAML2Q8IZL2 1156 aaPredicted RBP30.75■■■□□ 2.51
CBX4-202ENST00000448310 ZNF512Q96ME7 567 aaPredicted RBP30.75■■■□□ 2.51
CBX4-202ENST00000448310 BCO2Q9BYV7 579 aa30.75■■■□□ 2.51
CBX4-202ENST00000448310 HEBP1Q9NRV9 189 aa30.75■■■□□ 2.51
CBX4-202ENST00000448310 VNN2O95498 520 aa30.74■■■□□ 2.51
CBX4-202ENST00000448310 MYL4P12829 197 aa30.74■■■□□ 2.51
CBX4-202ENST00000448310 NMT1P30419 496 aaKnown RBP30.74■■■□□ 2.51
CBX4-202ENST00000448310 LONP1P36776 959 aaKnown RBP30.74■■■□□ 2.51
CBX4-202ENST00000448310 AARSP49588 968 aaKnown RBP eCLIP30.74■■■□□ 2.512e-6■■■■□ 23
CBX4-202ENST00000448310 KYAT1Q16773 422 aa30.74■■■□□ 2.51
CBX4-202ENST00000448310 DSTYKQ6XUX3 929 aa30.74■■■□□ 2.51
CBX4-202ENST00000448310 BRAPQ7Z569 592 aa30.74■■■□□ 2.51
CBX4-202ENST00000448310 ZSWIM3Q96MP5 696 aa30.74■■■□□ 2.51
CBX4-202ENST00000448310 FIZ1Q96SL8 496 aa30.74■■■□□ 2.51
CBX4-202ENST00000448310 MSTO1Q9BUK6 570 aa30.74■■■□□ 2.51
CBX4-202ENST00000448310 SPATA6Q9NWH7 488 aaPredicted RBP30.74■■■□□ 2.51
CBX4-202ENST00000448310 YIPF1Q9Y548 306 aa30.74■■■□□ 2.51
CBX4-202ENST00000448310 ZNF292O60281 2723 aa30.74■■■□□ 2.51
CBX4-202ENST00000448310 TSC2P49815 1807 aa30.73■■■□□ 2.51
CBX4-202ENST00000448310 TICRRQ7Z2Z1 1910 aa30.73■■■□□ 2.51
CBX4-202ENST00000448310 A0A0B4J269 797 aa30.73■■■□□ 2.51
CBX4-202ENST00000448310 TBCAO75347 108 aaKnown RBP30.73■■■□□ 2.51
CBX4-202ENST00000448310 MOSPD3O75425 235 aa30.73■■■□□ 2.51
CBX4-202ENST00000448310 OAZ2O95190 189 aa30.73■■■□□ 2.51
CBX4-202ENST00000448310 BMP15O95972 392 aa30.73■■■□□ 2.51
CBX4-202ENST00000448310 LMNAP02545 664 aaKnown RBP30.73■■■□□ 2.51
CBX4-202ENST00000448310 USP37Q86T82 979 aa30.73■■■□□ 2.51
CBX4-202ENST00000448310 ZFP14Q9HCL3 533 aa30.73■■■□□ 2.51
CBX4-202ENST00000448310 SCN1AP35498 2009 aa30.73■■■□□ 2.51
CBX4-202ENST00000448310 VPS37CA5D8V6 355 aaPredicted RBP30.72■■■□□ 2.51
CBX4-202ENST00000448310 XPOTO43592 962 aaKnown RBP30.72■■■□□ 2.51
CBX4-202ENST00000448310 MICAL2O94851 1124 aa30.72■■■□□ 2.51
CBX4-202ENST00000448310 TARSP26639 723 aaKnown RBP30.72■■■□□ 2.51
CBX4-202ENST00000448310 JADE1Q6IE81 842 aa30.72■■■□□ 2.51
CBX4-202ENST00000448310 BEST2Q8NFU1 509 aa30.72■■■□□ 2.51
CBX4-202ENST00000448310 LARP4BQ92615 738 aaKnown RBP30.72■■■□□ 2.51
CBX4-202ENST00000448310 ASB16Q96NS5 453 aa30.72■■■□□ 2.51
CBX4-202ENST00000448310 CRISPLD1Q9H336 500 aa30.72■■■□□ 2.51
CBX4-202ENST00000448310 SEMA4AQ9H3S1 761 aa30.72■■■□□ 2.51
CBX4-202ENST00000448310 ASAH2Q9NR71 780 aa30.72■■■□□ 2.51
CBX4-202ENST00000448310 CPSF3Q9UKF6 684 aaKnown RBP30.72■■■□□ 2.51
CBX4-202ENST00000448310 MAFFQ9ULX9 164 aa30.72■■■□□ 2.51
CBX4-202ENST00000448310 COL4A2P08572 1712 aa30.71■■■□□ 2.51
CBX4-202ENST00000448310 TISP43B9A030 160 aa30.71■■■□□ 2.51
CBX4-202ENST00000448310 ANKRD63C9JTQ0 380 aa30.71■■■□□ 2.51
CBX4-202ENST00000448310 ADRB2P07550 413 aa30.71■■■□□ 2.51
CBX4-202ENST00000448310 NFICP08651 508 aa30.71■■■□□ 2.51
CBX4-202ENST00000448310 ZC2HC1CQ53FD0 456 aaPredicted RBP30.71■■■□□ 2.51
CBX4-202ENST00000448310 SPATA1Q5VX52 437 aa30.71■■■□□ 2.51
CBX4-202ENST00000448310 OSBPL6Q9BZF3 934 aa30.71■■■□□ 2.51
CBX4-202ENST00000448310 GTF3C5Q9Y5Q8 519 aaPredicted RBP30.71■■■□□ 2.51
CBX4-202ENST00000448310 F5P12259 2224 aa30.7■■■□□ 2.51
CBX4-202ENST00000448310 SCP2P22307 547 aa30.7■■■□□ 2.51
CBX4-202ENST00000448310 GTF2BQ00403 316 aa30.7■■■□□ 2.51
CBX4-202ENST00000448310 DUSP4Q13115 394 aa30.7■■■□□ 2.51
CBX4-202ENST00000448310 ZC3H14Q6PJT7 736 aaKnown RBP30.7■■■□□ 2.51
CBX4-202ENST00000448310 USP49Q70CQ1 688 aa30.7■■■□□ 2.51
CBX4-202ENST00000448310 MAP4K3Q8IVH8 894 aa30.7■■■□□ 2.51
CBX4-202ENST00000448310 EPSTI1Q96J88 318 aa30.7■■■□□ 2.51
CBX4-202ENST00000448310 BRD9Q9H8M2 597 aa30.7■■■□□ 2.51
CBX4-202ENST00000448310 TCHHQ07283 1943 aa30.7■■■□□ 2.51
CBX4-202ENST00000448310 SHISA7A6NL88 538 aa30.69■■■□□ 2.5
CBX4-202ENST00000448310 LAMTOR5O43504 91 aa30.69■■■□□ 2.5
CBX4-202ENST00000448310 VIPR2P41587 438 aa30.69■■■□□ 2.5
CBX4-202ENST00000448310 ACOT2P49753 483 aa30.69■■■□□ 2.5
CBX4-202ENST00000448310 EPHA5P54756 1037 aa30.69■■■□□ 2.5
CBX4-202ENST00000448310 TEAD2Q15562 447 aa30.69■■■□□ 2.5
CBX4-202ENST00000448310 OVOS1Q6IE37 1185 aa30.69■■■□□ 2.5
CBX4-202ENST00000448310 VITQ6UXI7 678 aa30.69■■■□□ 2.5
CBX4-202ENST00000448310 SHKBP1Q8TBC3 707 aa30.69■■■□□ 2.5
CBX4-202ENST00000448310 SMARCD2Q92925 531 aa30.69■■■□□ 2.5
CBX4-202ENST00000448310 TMEM209Q96SK2 561 aa30.69■■■□□ 2.5
CBX4-202ENST00000448310 TRMT61BQ9BVS5 477 aaKnown RBP30.69■■■□□ 2.5
CBX4-202ENST00000448310 CCSER1Q9C0I3 900 aa30.69■■■□□ 2.5
CBX4-202ENST00000448310 IKZF4Q9H2S9 585 aa30.69■■■□□ 2.5
CBX4-202ENST00000448310 CLIC4Q9Y696 253 aa30.69■■■□□ 2.5
CBX4-202ENST00000448310 OTOGLQ3ZCN5 2332 aa30.68■■■□□ 2.5
CBX4-202ENST00000448310 OR6C75A6NL08 312 aa30.68■■■□□ 2.5
CBX4-202ENST00000448310 SPTLC1O15269 473 aa30.68■■■□□ 2.5
CBX4-202ENST00000448310 TYMPP19971 482 aa30.68■■■□□ 2.5
CBX4-202ENST00000448310 LILRA4P59901 499 aa30.68■■■□□ 2.5
CBX4-202ENST00000448310 C9orf57Q5W0N0 161 aa30.68■■■□□ 2.5
CBX4-202ENST00000448310 ZNF852Q6ZMS4 543 aa30.68■■■□□ 2.5
CBX4-202ENST00000448310 LEMD2Q8NC56 503 aa30.68■■■□□ 2.5
CBX4-202ENST00000448310 ZSCAN18Q8TBC5 510 aaPredicted RBP30.68■■■□□ 2.5
CBX4-202ENST00000448310 DNASE1L2Q92874 299 aa30.68■■■□□ 2.5
CBX4-202ENST00000448310 SENP8Q96LD8 212 aa30.68■■■□□ 2.5
CBX4-202ENST00000448310 OXCT2Q9BYC2 517 aaPredicted RBP30.68■■■□□ 2.5
CBX4-202ENST00000448310 DNAJC25Q9H1X3 360 aa30.68■■■□□ 2.5
CBX4-202ENST00000448310 SLC27A5Q9Y2P5 690 aa30.68■■■□□ 2.5
CBX4-202ENST00000448310 NCANO14594 1321 aa30.68■■■□□ 2.5
Retrieved 100 of 20,778 RNA–protein pairs in 51.5 ms