RNA–Protein interactions for RNA: ENST00000447510.6

PROM1-201, Transcript of prominin 1, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene PROM1, Length 3,977 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PROM1-201ENST00000447510 SCFD1Q8WVM8 642 aa6.34□□□□□ -1.39
PROM1-201ENST00000447510 PGBD4Q96DM1 585 aa6.34□□□□□ -1.39
PROM1-201ENST00000447510 ACAP3Q96P50 834 aa6.34□□□□□ -1.39
PROM1-201ENST00000447510 PADI3Q9ULW8 664 aa6.34□□□□□ -1.39
PROM1-201ENST00000447510 NOC2LQ9Y3T9 749 aaKnown RBP6.34□□□□□ -1.39
PROM1-201ENST00000447510 A0A0G2JMZ2 1700 aa6.34□□□□□ -1.39
PROM1-201ENST00000447510 GMNCA6NCL1 334 aa6.33□□□□□ -1.4
PROM1-201ENST00000447510 XPOTO43592 962 aaKnown RBP6.33□□□□□ -1.4
PROM1-201ENST00000447510 NCK2O43639 380 aa6.33□□□□□ -1.4
PROM1-201ENST00000447510 TACC1O75410 805 aa6.33□□□□□ -1.4
PROM1-201ENST00000447510 HEXIM1O94992 359 aaKnown RBP6.33□□□□□ -1.4
PROM1-201ENST00000447510 ATP6V1G2O95670 118 aa6.33□□□□□ -1.4
PROM1-201ENST00000447510 FAM107AO95990 144 aa6.33□□□□□ -1.4
PROM1-201ENST00000447510 TNNC2P02585 160 aa6.33□□□□□ -1.4
PROM1-201ENST00000447510 MYZAPP0CAP1 466 aa6.33□□□□□ -1.4
PROM1-201ENST00000447510 CKBP12277 381 aa6.33□□□□□ -1.4
PROM1-201ENST00000447510 PECAM1P16284 738 aaPredicted RBP6.33□□□□□ -1.4
PROM1-201ENST00000447510 CYLC1P35663 651 aaPredicted RBP6.33□□□□□ -1.4
PROM1-201ENST00000447510 CASP5P51878 434 aa6.33□□□□□ -1.4
PROM1-201ENST00000447510 KCNA1Q09470 495 aa6.33□□□□□ -1.4
PROM1-201ENST00000447510 IKBKEQ14164 716 aa6.33□□□□□ -1.4
PROM1-201ENST00000447510 C11orf91Q3C1V1 193 aa6.33□□□□□ -1.4
PROM1-201ENST00000447510 FAM228AQ86W67 206 aa6.33□□□□□ -1.4
PROM1-201ENST00000447510 DAW1Q8N136 415 aa6.33□□□□□ -1.4
PROM1-201ENST00000447510 ADSSL1Q8N142 457 aa6.33□□□□□ -1.4
PROM1-201ENST00000447510 B4GALNT2Q8NHY0 566 aa6.33□□□□□ -1.4
PROM1-201ENST00000447510 OSBPL1AQ9BXW6 950 aa6.33□□□□□ -1.4
PROM1-201ENST00000447510 TRIM4Q9C037 500 aa6.33□□□□□ -1.4
PROM1-201ENST00000447510 METTL14Q9HCE5 456 aaKnown RBP6.33□□□□□ -1.4
PROM1-201ENST00000447510 UTP3Q9NQZ2 479 aaKnown RBP eCLIP6.33□□□□□ -1.4
PROM1-201ENST00000447510 HSPBP1Q9NZL4 362 aa6.33□□□□□ -1.4
PROM1-201ENST00000447510 STIM2Q9P246 746 aa6.33□□□□□ -1.4
PROM1-201ENST00000447510 PCDHB7Q9Y5E2 793 aa6.33□□□□□ -1.4
PROM1-201ENST00000447510 FAM170AA1A519 330 aa6.33□□□□□ -1.4
PROM1-201ENST00000447510 RNF225M0QZC1 329 aaPredicted RBP6.33□□□□□ -1.4
PROM1-201ENST00000447510 B4GALT5O43286 388 aa6.33□□□□□ -1.4
PROM1-201ENST00000447510 BUB1O43683 1085 aa6.33□□□□□ -1.4
PROM1-201ENST00000447510 KLRC4O43908 158 aa6.33□□□□□ -1.4
PROM1-201ENST00000447510 AKR1B10O60218 316 aa6.33□□□□□ -1.4
PROM1-201ENST00000447510 IFNAR2P48551 515 aa6.33□□□□□ -1.4
PROM1-201ENST00000447510 CARSP49589 748 aaKnown RBP6.33□□□□□ -1.4
PROM1-201ENST00000447510 KRT83P78385 493 aa6.33□□□□□ -1.4
PROM1-201ENST00000447510 ANKRD20A8PQ5CZ79 823 aa6.33□□□□□ -1.4
PROM1-201ENST00000447510 ANKRD40Q6AI12 368 aa6.33□□□□□ -1.4
PROM1-201ENST00000447510 MPZL3Q6UWV2 235 aa6.33□□□□□ -1.4
PROM1-201ENST00000447510 GPD1LQ8N335 351 aa6.33□□□□□ -1.4
PROM1-201ENST00000447510 KIF2BQ8N4N8 673 aa6.33□□□□□ -1.4
PROM1-201ENST00000447510 USP38Q8NB14 1042 aa6.33□□□□□ -1.4
PROM1-201ENST00000447510 KIAA0895Q8NCT3 520 aa6.33□□□□□ -1.4
PROM1-201ENST00000447510 URGCPQ8TCY9 931 aa6.33□□□□□ -1.4
PROM1-201ENST00000447510 ITFG2Q969R8 447 aa6.33□□□□□ -1.4
PROM1-201ENST00000447510 SEC16BQ96JE7 1060 aa6.33□□□□□ -1.4
PROM1-201ENST00000447510 ZBTB45Q96K62 511 aaPredicted RBP6.33□□□□□ -1.4
PROM1-201ENST00000447510 RPGRIP1Q96KN7 1286 aa6.33□□□□□ -1.4
PROM1-201ENST00000447510 SH3GL2Q99962 352 aa6.33□□□□□ -1.4
PROM1-201ENST00000447510 TMEM134Q9H6X4 195 aa6.33□□□□□ -1.4
PROM1-201ENST00000447510 KIAA1586Q9HCI6 787 aa6.33□□□□□ -1.4
PROM1-201ENST00000447510 NOP53Q9NZM5 478 aaKnown RBP6.33□□□□□ -1.4
PROM1-201ENST00000447510 MYO1AQ9UBC5 1043 aa6.33□□□□□ -1.4
PROM1-201ENST00000447510 UBE4BO95155 1302 aa6.33□□□□□ -1.4
PROM1-201ENST00000447510 A0A1B0GTH6 734 aa6.33□□□□□ -1.4
PROM1-201ENST00000447510 RTN2O75298 545 aa6.33□□□□□ -1.4
PROM1-201ENST00000447510 STBD1O95210 358 aa6.33□□□□□ -1.4
PROM1-201ENST00000447510 ACRP10323 421 aa6.33□□□□□ -1.4
PROM1-201ENST00000447510 MAPK7Q13164 816 aa6.33□□□□□ -1.4
PROM1-201ENST00000447510 KRT31Q15323 416 aa6.33□□□□□ -1.4
PROM1-201ENST00000447510 QPCTQ16769 361 aa6.33□□□□□ -1.4
PROM1-201ENST00000447510 LRRC26Q2I0M4 334 aa6.33□□□□□ -1.4
PROM1-201ENST00000447510 DCAF4L1Q3SXM0 396 aa6.33□□□□□ -1.4
PROM1-201ENST00000447510 LRRC23Q53EV4 343 aaPredicted RBP6.33□□□□□ -1.4
PROM1-201ENST00000447510 ALS2CLQ60I27 953 aa6.33□□□□□ -1.4
PROM1-201ENST00000447510 GLB1LQ6UWU2 654 aa6.33□□□□□ -1.4
PROM1-201ENST00000447510 CACNA2D4Q7Z3S7 1137 aa6.33□□□□□ -1.4
PROM1-201ENST00000447510 TRIM74Q86UV6 250 aa6.33□□□□□ -1.4
PROM1-201ENST00000447510 TRIM73Q86UV7 250 aa6.33□□□□□ -1.4
PROM1-201ENST00000447510 IFT20Q8IY31 132 aa6.33□□□□□ -1.4
PROM1-201ENST00000447510 ANKS4BQ8N8V4 417 aa6.33□□□□□ -1.4
PROM1-201ENST00000447510 DBF4BQ8NFT6 615 aa6.33□□□□□ -1.4
PROM1-201ENST00000447510 OR8K1Q8NGG5 319 aa6.33□□□□□ -1.4
PROM1-201ENST00000447510 PRCCQ92733 491 aaPredicted RBP6.33□□□□□ -1.4
PROM1-201ENST00000447510 CNOT6LQ96LI5 555 aaKnown RBP6.33□□□□□ -1.4
PROM1-201ENST00000447510 CCDC42Q96M95 316 aa6.33□□□□□ -1.4
PROM1-201ENST00000447510 OSBPL7Q9BZF2 842 aa6.33□□□□□ -1.4
PROM1-201ENST00000447510 PAPOLBQ9NRJ5 636 aaKnown RBP6.33□□□□□ -1.4
PROM1-201ENST00000447510 AGPAT3Q9NRZ7 376 aa6.33□□□□□ -1.4
PROM1-201ENST00000447510 RBAKQ9NYW8 714 aaPredicted RBP6.33□□□□□ -1.4
PROM1-201ENST00000447510 KLK14Q9P0G3 267 aa6.33□□□□□ -1.4
PROM1-201ENST00000447510 NOVA2Q9UNW9 492 aaKnown RBP6.33□□□□□ -1.4
PROM1-201ENST00000447510 PLAAQ9Y263 795 aa6.33□□□□□ -1.4
PROM1-201ENST00000447510 NUB1Q9Y5A7 615 aa6.33□□□□□ -1.4
PROM1-201ENST00000447510 hCG_2014768A0A024R1R8 64 aa6.33□□□□□ -1.4
PROM1-201ENST00000447510 TARSL2A2RTX5 802 aaKnown RBP6.33□□□□□ -1.4
PROM1-201ENST00000447510 LRRD1A4D1F6 860 aa6.33□□□□□ -1.4
PROM1-201ENST00000447510 KCNJ18B7U540 433 aa6.33□□□□□ -1.4
PROM1-201ENST00000447510 MOCS3O95396 460 aa6.33□□□□□ -1.4
PROM1-201ENST00000447510 FAM153BP0C7A2 387 aa6.33□□□□□ -1.4
PROM1-201ENST00000447510 STAG3L1P0CL83 205 aa6.33□□□□□ -1.4
PROM1-201ENST00000447510 SKIP12755 728 aa6.33□□□□□ -1.4
PROM1-201ENST00000447510 AXLP30530 894 aa6.33□□□□□ -1.4
PROM1-201ENST00000447510 CTNNA1P35221 906 aaKnown RBP6.33□□□□□ -1.4
Retrieved 100 of 20,778 RNA–protein pairs in 46.3 ms