RNA–Protein interactions for RNA: ENST00000446876.1

HDAC4-204, Transcript of histone deacetylase 4, humanhuman

TSL 4

Gene HDAC4, Length 554 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC4-204ENST00000446876 ROR1Q01973 937 aa16.03■□□□□ 0.16
HDAC4-204ENST00000446876 RAB33AQ14088 237 aa16.03■□□□□ 0.16
HDAC4-204ENST00000446876 MRPL58Q14197 206 aaKnown RBP16.03■□□□□ 0.16
HDAC4-204ENST00000446876 KCNB1Q14721 858 aa16.03■□□□□ 0.16
HDAC4-204ENST00000446876 CTXN3Q4LDR2 81 aa16.03■□□□□ 0.16
HDAC4-204ENST00000446876 GPR149Q86SP6 731 aa16.03■□□□□ 0.16
HDAC4-204ENST00000446876 NT5DC4Q86YG4 428 aa16.03■□□□□ 0.16
HDAC4-204ENST00000446876 C12orf56Q8IXR9 622 aa16.03■□□□□ 0.16
HDAC4-204ENST00000446876 XXYLT1Q8NBI6 393 aa16.03■□□□□ 0.16
HDAC4-204ENST00000446876 APPL2Q8NEU8 664 aa16.03■□□□□ 0.16
HDAC4-204ENST00000446876 OR5B17Q8NGF7 314 aa16.03■□□□□ 0.16
HDAC4-204ENST00000446876 SENP8Q96LD8 212 aa16.03■□□□□ 0.16
HDAC4-204ENST00000446876 PHF7Q9BWX1 381 aaPredicted RBP16.03■□□□□ 0.16
HDAC4-204ENST00000446876 AGAP1Q9UPQ3 857 aa16.03■□□□□ 0.16
HDAC4-204ENST00000446876 WDR27A2RRH5 827 aa16.02■□□□□ 0.16
HDAC4-204ENST00000446876 H7C4K7 107 aa16.02■□□□□ 0.16
HDAC4-204ENST00000446876 EXOC3O60645 756 aa16.02■□□□□ 0.16
HDAC4-204ENST00000446876 TMEM191BP0C7N4 346 aa16.02■□□□□ 0.16
HDAC4-204ENST00000446876 DLATP10515 647 aaKnown RBP16.02■□□□□ 0.16
HDAC4-204ENST00000446876 MTHFRP42898 656 aa16.02■□□□□ 0.16
HDAC4-204ENST00000446876 TAF6P49848 677 aa16.02■□□□□ 0.16
HDAC4-204ENST00000446876 SNRPFP62306 86 aaKnown RBP16.02■□□□□ 0.16
HDAC4-204ENST00000446876 CYP24A1Q07973 514 aa16.02■□□□□ 0.16
HDAC4-204ENST00000446876 SLC8B1Q6J4K2 584 aa16.02■□□□□ 0.16
HDAC4-204ENST00000446876 ZNF280DQ6N043 979 aa16.02■□□□□ 0.16
HDAC4-204ENST00000446876 CXorf38Q8TB03 319 aa16.02■□□□□ 0.16
HDAC4-204ENST00000446876 CCDC127Q96BQ5 260 aa16.02■□□□□ 0.16
HDAC4-204ENST00000446876 ZNF707Q96C28 371 aaPredicted RBP16.02■□□□□ 0.16
HDAC4-204ENST00000446876 CCDC34Q96HJ3 373 aa16.02■□□□□ 0.16
HDAC4-204ENST00000446876 RIPOR3Q96MK2 946 aa16.02■□□□□ 0.16
HDAC4-204ENST00000446876 POP1Q99575 1024 aaKnown RBP16.02■□□□□ 0.16
HDAC4-204ENST00000446876 GZF1Q9H116 711 aaPredicted RBP16.02■□□□□ 0.16
HDAC4-204ENST00000446876 PLEKHA4Q9H4M7 779 aa16.02■□□□□ 0.16
HDAC4-204ENST00000446876 KIAA1586Q9HCI6 787 aa16.02■□□□□ 0.16
HDAC4-204ENST00000446876 TSHZ2Q9NRE2 1034 aa16.02■□□□□ 0.16
HDAC4-204ENST00000446876 INTS13Q9NVM9 706 aa16.02■□□□□ 0.16
HDAC4-204ENST00000446876 CGNQ9P2M7 1197 aaKnown RBP16.02■□□□□ 0.16
HDAC4-204ENST00000446876 SIX4Q9UIU6 781 aa16.02■□□□□ 0.16
HDAC4-204ENST00000446876 ZMYND10O75800 440 aa16.01■□□□□ 0.15
HDAC4-204ENST00000446876 NR3C1P04150 777 aa16.01■□□□□ 0.15
HDAC4-204ENST00000446876 C8AP07357 584 aa16.01■□□□□ 0.15
HDAC4-204ENST00000446876 KRT19P08727 400 aa16.01■□□□□ 0.15
HDAC4-204ENST00000446876 OR4Q2P0C623 313 aa16.01■□□□□ 0.15
HDAC4-204ENST00000446876 ODC1P11926 461 aa16.01■□□□□ 0.15
HDAC4-204ENST00000446876 CASP4P49662 377 aa16.01■□□□□ 0.15
HDAC4-204ENST00000446876 YWHAHQ04917 246 aaPredicted RBP16.01■□□□□ 0.15
HDAC4-204ENST00000446876 BFSP1Q12934 665 aa16.01■□□□□ 0.15
HDAC4-204ENST00000446876 PSMD6Q15008 389 aa16.01■□□□□ 0.15
HDAC4-204ENST00000446876 ATAT1Q5SQI0 421 aa16.01■□□□□ 0.15
HDAC4-204ENST00000446876 LIN9Q5TKA1 542 aa16.01■□□□□ 0.15
HDAC4-204ENST00000446876 USP37Q86T82 979 aa16.01■□□□□ 0.15
HDAC4-204ENST00000446876 CSGALNACT2Q8N6G5 542 aa16.01■□□□□ 0.15
HDAC4-204ENST00000446876 CMASQ8NFW8 434 aaPredicted RBP16.01■□□□□ 0.15
HDAC4-204ENST00000446876 GOLGA5Q8TBA6 731 aa16.01■□□□□ 0.15
HDAC4-204ENST00000446876 SLC7A14Q8TBB6 771 aa16.01■□□□□ 0.15
HDAC4-204ENST00000446876 PLEKHO2Q8TD55 490 aa16.01■□□□□ 0.15
HDAC4-204ENST00000446876 HDAC7Q8WUI4 952 aa16.01■□□□□ 0.15
HDAC4-204ENST00000446876 CACTINQ8WUQ7 758 aaKnown RBP16.01■□□□□ 0.15
HDAC4-204ENST00000446876 SMG7Q92540 1137 aaKnown RBP16.01■□□□□ 0.15
HDAC4-204ENST00000446876 BORCS6Q96GS4 357 aa16.01■□□□□ 0.15
HDAC4-204ENST00000446876 TIGD1Q96MW7 591 aa16.01■□□□□ 0.15
HDAC4-204ENST00000446876 DPP7Q9UHL4 492 aa16.01■□□□□ 0.15
HDAC4-204ENST00000446876 PCDHA5Q9Y5H7 936 aa16.01■□□□□ 0.15
HDAC4-204ENST00000446876 MUC3AQ02505 3323 aa16.01■□□□□ 0.15
HDAC4-204ENST00000446876 LOC730098B7Z3J9 87 aa16■□□□□ 0.15
HDAC4-204ENST00000446876 PDXKO00764 312 aa16■□□□□ 0.15
HDAC4-204ENST00000446876 CYB561D2O14569 222 aa16■□□□□ 0.15
HDAC4-204ENST00000446876 CCL16O15467 120 aa16■□□□□ 0.15
HDAC4-204ENST00000446876 KINO60870 393 aaKnown RBP16■□□□□ 0.15
HDAC4-204ENST00000446876 C1RP00736 705 aa16■□□□□ 0.15
HDAC4-204ENST00000446876 CPB1P15086 417 aa16■□□□□ 0.15
HDAC4-204ENST00000446876 TYMPP19971 482 aa16■□□□□ 0.15
HDAC4-204ENST00000446876 CDR1P51861 262 aa16■□□□□ 0.15
HDAC4-204ENST00000446876 SURF1Q15526 300 aa16■□□□□ 0.15
HDAC4-204ENST00000446876 SV2CQ496J9 727 aa16■□□□□ 0.15
HDAC4-204ENST00000446876 PPM1LQ5SGD2 360 aa16■□□□□ 0.15
HDAC4-204ENST00000446876 OVOS1Q6IE37 1185 aa16■□□□□ 0.15
HDAC4-204ENST00000446876 ELMSAN1Q6PJG2 1045 aa16■□□□□ 0.15
HDAC4-204ENST00000446876 WDR49Q8IV35 697 aa16■□□□□ 0.15
HDAC4-204ENST00000446876 ANKRD36BP1Q96IX9 119 aa16■□□□□ 0.15
HDAC4-204ENST00000446876 ZNF560Q96MR9 790 aa16■□□□□ 0.15
HDAC4-204ENST00000446876 NECTIN4Q96NY8 510 aa16■□□□□ 0.15
HDAC4-204ENST00000446876 TMEM209Q96SK2 561 aa16■□□□□ 0.15
HDAC4-204ENST00000446876 CGRRF1Q99675 332 aa16■□□□□ 0.15
HDAC4-204ENST00000446876 DMAC2Q9NW81 257 aa16■□□□□ 0.15
HDAC4-204ENST00000446876 ITGA11Q9UKX5 1188 aa16■□□□□ 0.15
HDAC4-204ENST00000446876 KPNA7A9QM74 516 aa15.99■□□□□ 0.15
HDAC4-204ENST00000446876 C2CD4DB7Z1M9 353 aa15.99■□□□□ 0.15
HDAC4-204ENST00000446876 ABLIM3O94929 683 aa15.99■□□□□ 0.15
HDAC4-204ENST00000446876 OAZ2O95190 189 aa15.99■□□□□ 0.15
HDAC4-204ENST00000446876 SEC24AO95486 1093 aa15.99■□□□□ 0.15
HDAC4-204ENST00000446876 TNNC2P02585 160 aa15.99■□□□□ 0.15
HDAC4-204ENST00000446876 TNNI1P19237 187 aa15.99■□□□□ 0.15
HDAC4-204ENST00000446876 WSCD1Q658N2 575 aa15.99■□□□□ 0.15
HDAC4-204ENST00000446876 ISM2Q6H9L7 571 aa15.99■□□□□ 0.15
HDAC4-204ENST00000446876 C15orf39Q6ZRI6 1047 aa15.99■□□□□ 0.15
HDAC4-204ENST00000446876 GUF1Q8N442 669 aaKnown RBP15.99■□□□□ 0.15
HDAC4-204ENST00000446876 ZNF516Q92618 1163 aa15.99■□□□□ 0.15
HDAC4-204ENST00000446876 SMARCE1Q969G3 411 aa15.99■□□□□ 0.15
HDAC4-204ENST00000446876 MFSD14AQ96MC6 490 aa15.99■□□□□ 0.15
Retrieved 100 of 20,778 RNA–protein pairs in 22.8 ms