RNA–Protein interactions for RNA: ENST00000444272.1

SYNCRIP-203, Transcript of synaptotagmin binding cytoplasmic RNA interacting protein, humanhuman

TSL 3

Gene SYNCRIP, Length 610 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SYNCRIP-203ENST00000444272 SEMG2Q02383 582 aa15.79■□□□□ 0.12
SYNCRIP-203ENST00000444272 RUNX3Q13761 415 aa15.79■□□□□ 0.12
SYNCRIP-203ENST00000444272 NBR1Q14596 966 aa15.79■□□□□ 0.12
SYNCRIP-203ENST00000444272 C2orf27AQ580R0 203 aa15.79■□□□□ 0.12
SYNCRIP-203ENST00000444272 ANKS3Q6ZW76 656 aa15.79■□□□□ 0.12
SYNCRIP-203ENST00000444272 HEATR3Q7Z4Q2 680 aa15.79■□□□□ 0.12
SYNCRIP-203ENST00000444272 OLIG1Q8TAK6 271 aa15.79■□□□□ 0.12
SYNCRIP-203ENST00000444272 EZH1Q92800 747 aaPredicted RBP15.79■□□□□ 0.12
SYNCRIP-203ENST00000444272 NIFKQ9BYG3 293 aaKnown RBP15.79■□□□□ 0.12
SYNCRIP-203ENST00000444272 OBP2AQ9NY56 170 aa15.79■□□□□ 0.12
SYNCRIP-203ENST00000444272 PAXBP1Q9Y5B6 917 aa15.79■□□□□ 0.12
SYNCRIP-203ENST00000444272 UTP20O75691 2785 aaKnown RBP15.78■□□□□ 0.12
SYNCRIP-203ENST00000444272 ERICH2A1L162 156 aa15.78■□□□□ 0.12
SYNCRIP-203ENST00000444272 E9PAM4 449 aa15.78■□□□□ 0.12
SYNCRIP-203ENST00000444272 TSPAN1O60635 241 aa15.78■□□□□ 0.12
SYNCRIP-203ENST00000444272 FOSP01100 380 aaPredicted RBP15.78■□□□□ 0.12
SYNCRIP-203ENST00000444272 IGFBP6P24592 240 aaPredicted RBP15.78■□□□□ 0.12
SYNCRIP-203ENST00000444272 SMARCA1P28370 1054 aa15.78■□□□□ 0.12
SYNCRIP-203ENST00000444272 RHDQ02161 417 aa15.78■□□□□ 0.12
SYNCRIP-203ENST00000444272 LMBRD2Q68DH5 695 aaPredicted RBP15.78■□□□□ 0.12
SYNCRIP-203ENST00000444272 SLC8B1Q6J4K2 584 aa15.78■□□□□ 0.12
SYNCRIP-203ENST00000444272 SRBD1Q8N5C6 995 aaKnown RBP15.78■□□□□ 0.12
SYNCRIP-203ENST00000444272 CTCFLQ8NI51 663 aaPredicted RBP15.78■□□□□ 0.12
SYNCRIP-203ENST00000444272 SETD7Q8WTS6 366 aaKnown RBP15.78■□□□□ 0.12
SYNCRIP-203ENST00000444272 BAP1Q92560 729 aa15.78■□□□□ 0.12
SYNCRIP-203ENST00000444272 CCDC51Q96ER9 411 aa15.78■□□□□ 0.12
SYNCRIP-203ENST00000444272 P2RY13Q9BPV8 354 aa15.78■□□□□ 0.12
SYNCRIP-203ENST00000444272 PI4K2AQ9BTU6 479 aa15.78■□□□□ 0.12
SYNCRIP-203ENST00000444272 HPS4Q9NQG7 708 aa15.78■□□□□ 0.12
SYNCRIP-203ENST00000444272 BOD1L1Q8NFC6 3051 aa15.78■□□□□ 0.12
SYNCRIP-203ENST00000444272 ITPR3Q14573 2671 aa15.78■□□□□ 0.12
SYNCRIP-203ENST00000444272 C2CD3Q4AC94 2353 aa15.77■□□□□ 0.12
SYNCRIP-203ENST00000444272 PLXND1Q9Y4D7 1925 aa15.77■□□□□ 0.12
SYNCRIP-203ENST00000444272 CHMP2AO43633 222 aa15.77■□□□□ 0.12
SYNCRIP-203ENST00000444272 DKK1O94907 266 aa15.77■□□□□ 0.12
SYNCRIP-203ENST00000444272 PRAMEF12O95522 483 aa15.77■□□□□ 0.12
SYNCRIP-203ENST00000444272 ADSSP30520 456 aa15.77■□□□□ 0.12
SYNCRIP-203ENST00000444272 MCM2P49736 904 aa15.77■□□□□ 0.12
SYNCRIP-203ENST00000444272 C4orf17Q53FE4 359 aa15.77■□□□□ 0.12
SYNCRIP-203ENST00000444272 SPDYCQ5MJ68 293 aa15.77■□□□□ 0.12
SYNCRIP-203ENST00000444272 TRIM68Q6AZZ1 485 aa15.77■□□□□ 0.12
SYNCRIP-203ENST00000444272 DEFB119Q8N690 84 aa15.77■□□□□ 0.12
SYNCRIP-203ENST00000444272 NXPE2Q96DL1 559 aa15.77■□□□□ 0.12
SYNCRIP-203ENST00000444272 POLR3CQ9BUI4 534 aaPredicted RBP15.77■□□□□ 0.12
SYNCRIP-203ENST00000444272 EBF3Q9H4W6 596 aa15.77■□□□□ 0.12
SYNCRIP-203ENST00000444272 PRDM16Q9HAZ2 1276 aa15.77■□□□□ 0.12
SYNCRIP-203ENST00000444272 GKN1Q9NS71 199 aa15.77■□□□□ 0.12
SYNCRIP-203ENST00000444272 THG1LQ9NWX6 298 aaKnown RBP15.77■□□□□ 0.12
SYNCRIP-203ENST00000444272 TPCN1Q9ULQ1 816 aa15.77■□□□□ 0.12
SYNCRIP-203ENST00000444272 I3L4J1 428 aa15.76■□□□□ 0.11
SYNCRIP-203ENST00000444272 AXLP30530 894 aa15.76■□□□□ 0.11
SYNCRIP-203ENST00000444272 XKR3Q5GH77 459 aa15.76■□□□□ 0.11
SYNCRIP-203ENST00000444272 RABEPKQ7Z6M1 372 aa15.76■□□□□ 0.11
SYNCRIP-203ENST00000444272 PRPF31Q8WWY3 499 aaKnown RBP15.76■□□□□ 0.11
SYNCRIP-203ENST00000444272 LRRK2Q5S007 2527 aa15.76■□□□□ 0.11
SYNCRIP-203ENST00000444272 RIPPLY3P57055 190 aa15.75■□□□□ 0.11
SYNCRIP-203ENST00000444272 SETQ01105 290 aaPredicted RBP15.75■□□□□ 0.11
SYNCRIP-203ENST00000444272 AMPD2Q01433 879 aa15.75■□□□□ 0.11
SYNCRIP-203ENST00000444272 TLE3Q04726 772 aa15.75■□□□□ 0.11
SYNCRIP-203ENST00000444272 CDR2LQ86X02 465 aaPredicted RBP15.75■□□□□ 0.11
SYNCRIP-203ENST00000444272 TMC8Q8IU68 726 aa15.75■□□□□ 0.11
SYNCRIP-203ENST00000444272 PNMA5Q96PV4 448 aa15.75■□□□□ 0.11
SYNCRIP-203ENST00000444272 FAM83CQ9BQN1 747 aa15.75■□□□□ 0.11
SYNCRIP-203ENST00000444272 JPH2Q9BR39 696 aaPredicted RBP15.75■□□□□ 0.11
SYNCRIP-203ENST00000444272 LZTS2Q9BRK4 669 aa15.75■□□□□ 0.11
SYNCRIP-203ENST00000444272 LRRC3Q9BY71 257 aa15.75■□□□□ 0.11
SYNCRIP-203ENST00000444272 RIC8AQ9NPQ8 531 aa15.75■□□□□ 0.11
SYNCRIP-203ENST00000444272 PTGESO14684 152 aa15.74■□□□□ 0.11
SYNCRIP-203ENST00000444272 STBD1O95210 358 aa15.74■□□□□ 0.11
SYNCRIP-203ENST00000444272 NPTXRO95502 500 aa15.74■□□□□ 0.11
SYNCRIP-203ENST00000444272 MS4A1P11836 297 aa15.74■□□□□ 0.11
SYNCRIP-203ENST00000444272 NCBP1Q09161 790 aaKnown RBP15.74■□□□□ 0.11
SYNCRIP-203ENST00000444272 LAMTOR4Q0VGL1 99 aa15.74■□□□□ 0.11
SYNCRIP-203ENST00000444272 SMAD1Q15797 465 aaKnown RBP15.74■□□□□ 0.11
SYNCRIP-203ENST00000444272 PREPLQ4J6C6 727 aaPredicted RBP15.74■□□□□ 0.11
SYNCRIP-203ENST00000444272 GPR158Q5T848 1215 aa15.74■□□□□ 0.11
SYNCRIP-203ENST00000444272 ZNF574Q6ZN55 896 aaPredicted RBP15.74■□□□□ 0.11
SYNCRIP-203ENST00000444272 RNF149Q8NC42 400 aa15.74■□□□□ 0.11
SYNCRIP-203ENST00000444272 AP5Z1O43299 807 aa15.73■□□□□ 0.11
SYNCRIP-203ENST00000444272 B3GAT3O94766 335 aa15.73■□□□□ 0.11
SYNCRIP-203ENST00000444272 ALDH1A2O94788 518 aa15.73■□□□□ 0.11
SYNCRIP-203ENST00000444272 THP07101 528 aa15.73■□□□□ 0.11
SYNCRIP-203ENST00000444272 AP3B2Q13367 1082 aa15.73■□□□□ 0.11
SYNCRIP-203ENST00000444272 NAB2Q15742 525 aa15.73■□□□□ 0.11
SYNCRIP-203ENST00000444272 MAP7D1Q3KQU3 841 aa15.73■□□□□ 0.11
SYNCRIP-203ENST00000444272 TPGS2Q68CL5 300 aa15.73■□□□□ 0.11
SYNCRIP-203ENST00000444272 PLA2G4FQ68DD2 849 aa15.73■□□□□ 0.11
SYNCRIP-203ENST00000444272 TYW1BQ6NUM6 668 aa15.73■□□□□ 0.11
SYNCRIP-203ENST00000444272 CCDC82Q8N4S0 544 aa15.73■□□□□ 0.11
SYNCRIP-203ENST00000444272 SNIP1Q8TAD8 396 aaKnown RBP15.73■□□□□ 0.11
SYNCRIP-203ENST00000444272 BAHD1Q8TBE0 780 aaPredicted RBP15.73■□□□□ 0.11
SYNCRIP-203ENST00000444272 WHAMMQ8TF30 809 aa15.73■□□□□ 0.11
SYNCRIP-203ENST00000444272 PSPC1Q8WXF1 523 aaKnown RBP15.73■□□□□ 0.11
SYNCRIP-203ENST00000444272 TMEM143Q96AN5 459 aa15.73■□□□□ 0.11
SYNCRIP-203ENST00000444272 MED8Q96G25 268 aa15.73■□□□□ 0.11
SYNCRIP-203ENST00000444272 SMG9Q9H0W8 520 aaKnown RBP15.73■□□□□ 0.11
SYNCRIP-203ENST00000444272 ATXN3LQ9H3M9 355 aa15.73■□□□□ 0.11
SYNCRIP-203ENST00000444272 CHMP4BQ9H444 224 aaKnown RBP15.73■□□□□ 0.11
SYNCRIP-203ENST00000444272 FZD8Q9H461 694 aa15.73■□□□□ 0.11
SYNCRIP-203ENST00000444272 AK5Q9Y6K8 562 aa15.73■□□□□ 0.11
Retrieved 100 of 20,778 RNA–protein pairs in 20.4 ms