RNA–Protein interactions for RNA: ENST00000442708.5

USP39-205, Transcript of ubiquitin specific peptidase 39, humanhuman

TSL 4

Gene USP39, Length 561 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP39-205ENST00000442708 ELAVL2Q12926 359 aaKnown RBP17.28■□□□□ 0.36
USP39-205ENST00000442708 NFKBIBQ15653 356 aa17.28■□□□□ 0.36
USP39-205ENST00000442708 DUSP6Q16828 381 aa17.28■□□□□ 0.36
USP39-205ENST00000442708 RSPO2Q6UXX9 243 aaPredicted RBP17.28■□□□□ 0.36
USP39-205ENST00000442708 C15orf39Q6ZRI6 1047 aa17.28■□□□□ 0.36
USP39-205ENST00000442708 IRF2BP1Q8IU81 584 aa17.28■□□□□ 0.36
USP39-205ENST00000442708 VN1R2Q8NFZ6 395 aa17.28■□□□□ 0.36
USP39-205ENST00000442708 SENP8Q96LD8 212 aa17.28■□□□□ 0.36
USP39-205ENST00000442708 SRRTQ9BXP5 876 aaKnown RBP17.28■□□□□ 0.36
USP39-205ENST00000442708 COL25A1Q9BXS0 654 aaPredicted RBP17.28■□□□□ 0.36
USP39-205ENST00000442708 IGFLR1Q9H665 355 aa17.28■□□□□ 0.36
USP39-205ENST00000442708 TLE6Q9H808 572 aa17.28■□□□□ 0.36
USP39-205ENST00000442708 RXFP1Q9HBX9 757 aa17.28■□□□□ 0.36
USP39-205ENST00000442708 PRDM6Q9NQX0 595 aa17.28■□□□□ 0.36
USP39-205ENST00000442708 PCDHB8Q9UN66 801 aa17.28■□□□□ 0.36
USP39-205ENST00000442708 TIMM13Q9Y5L4 95 aaPredicted RBP17.28■□□□□ 0.36
USP39-205ENST00000442708 IKBKBO14920 756 aa17.27■□□□□ 0.36
USP39-205ENST00000442708 TEX28O15482 410 aa17.27■□□□□ 0.36
USP39-205ENST00000442708 ADAM12O43184 909 aa17.27■□□□□ 0.36
USP39-205ENST00000442708 CLASP2O75122 1294 aaKnown RBP17.27■□□□□ 0.36
USP39-205ENST00000442708 KRT13P13646 458 aa17.27■□□□□ 0.36
USP39-205ENST00000442708 PTMSP20962 102 aa17.27■□□□□ 0.36
USP39-205ENST00000442708 ERCC5P28715 1186 aaPredicted RBP17.27■□□□□ 0.36
USP39-205ENST00000442708 GCLMP48507 274 aa17.27■□□□□ 0.36
USP39-205ENST00000442708 TAF6P49848 677 aa17.27■□□□□ 0.36
USP39-205ENST00000442708 ENPEPQ07075 957 aa17.27■□□□□ 0.36
USP39-205ENST00000442708 MRPL58Q14197 206 aaKnown RBP17.27■□□□□ 0.36
USP39-205ENST00000442708 COL19A1Q14993 1142 aa17.27■□□□□ 0.36
USP39-205ENST00000442708 ZACNQ401N2 412 aa17.27■□□□□ 0.36
USP39-205ENST00000442708 KIAA1841Q6NSI8 718 aa17.27■□□□□ 0.36
USP39-205ENST00000442708 SASS6Q6UVJ0 657 aa17.27■□□□□ 0.36
USP39-205ENST00000442708 DSTYKQ6XUX3 929 aa17.27■□□□□ 0.36
USP39-205ENST00000442708 SV2AQ7L0J3 742 aa17.27■□□□□ 0.36
USP39-205ENST00000442708 LRRC52Q8N7C0 313 aa17.27■□□□□ 0.36
USP39-205ENST00000442708 PIK3R5Q8WYR1 880 aa17.27■□□□□ 0.36
USP39-205ENST00000442708 KLHL5Q96PQ7 755 aa17.27■□□□□ 0.36
USP39-205ENST00000442708 CLSTN3Q9BQT9 956 aa17.27■□□□□ 0.36
USP39-205ENST00000442708 BRWD1Q9NSI6 2320 aa17.26■□□□□ 0.35
USP39-205ENST00000442708 KPNA7A9QM74 516 aa17.26■□□□□ 0.35
USP39-205ENST00000442708 TBC1D4O60343 1298 aa17.26■□□□□ 0.35
USP39-205ENST00000442708 LRRN2O75325 713 aa17.26■□□□□ 0.35
USP39-205ENST00000442708 GLP2RO95838 553 aa17.26■□□□□ 0.35
USP39-205ENST00000442708 MYL6P60660 151 aa17.26■□□□□ 0.35
USP39-205ENST00000442708 TYRO3Q06418 890 aa17.26■□□□□ 0.35
USP39-205ENST00000442708 KCNC3Q14003 757 aa17.26■□□□□ 0.35
USP39-205ENST00000442708 PSMD5Q16401 504 aa17.26■□□□□ 0.35
USP39-205ENST00000442708 VARS2Q5ST30 1063 aaKnown RBP17.26■□□□□ 0.35
USP39-205ENST00000442708 FRMD5Q7Z6J6 570 aa17.26■□□□□ 0.35
USP39-205ENST00000442708 GLYCTKQ8IVS8 523 aa17.26■□□□□ 0.35
USP39-205ENST00000442708 SLC35C1Q96A29 364 aa17.26■□□□□ 0.35
USP39-205ENST00000442708 HPDLQ96IR7 371 aa17.26■□□□□ 0.35
USP39-205ENST00000442708 ZNF560Q96MR9 790 aa17.26■□□□□ 0.35
USP39-205ENST00000442708 XYLT2Q9H1B5 865 aa17.26■□□□□ 0.35
USP39-205ENST00000442708 MMRN2Q9H8L6 949 aa17.26■□□□□ 0.35
USP39-205ENST00000442708 ARMCX3Q9UH62 379 aaPredicted RBP17.26■□□□□ 0.35
USP39-205ENST00000442708 CYB561D2O14569 222 aa17.25■□□□□ 0.35
USP39-205ENST00000442708 SYN3O14994 580 aa17.25■□□□□ 0.35
USP39-205ENST00000442708 PNPLA4P41247 253 aa17.25■□□□□ 0.35
USP39-205ENST00000442708 AP3M2P53677 418 aa17.25■□□□□ 0.35
USP39-205ENST00000442708 ADAM15Q13444 863 aa17.25■□□□□ 0.35
USP39-205ENST00000442708 BIRC3Q13489 604 aa17.25■□□□□ 0.35
USP39-205ENST00000442708 STX1AQ16623 288 aa17.25■□□□□ 0.35
USP39-205ENST00000442708 CTC1Q2NKJ3 1217 aa17.25■□□□□ 0.35
USP39-205ENST00000442708 SV2CQ496J9 727 aa17.25■□□□□ 0.35
USP39-205ENST00000442708 CCDC40Q4G0X9 1142 aa17.25■□□□□ 0.35
USP39-205ENST00000442708 DCAF17Q5H9S7 520 aaPredicted RBP17.25■□□□□ 0.35
USP39-205ENST00000442708 GPR65Q8IYL9 337 aa17.25■□□□□ 0.35
USP39-205ENST00000442708 SLC22A17Q8WUG5 538 aa17.25■□□□□ 0.35
USP39-205ENST00000442708 SYAP1Q96A49 352 aaPredicted RBP17.25■□□□□ 0.35
USP39-205ENST00000442708 FUCA2Q9BTY2 467 aa17.25■□□□□ 0.35
USP39-205ENST00000442708 DNAJC25Q9H1X3 360 aa17.25■□□□□ 0.35
USP39-205ENST00000442708 GDAP2Q9NXN4 497 aa17.25■□□□□ 0.35
USP39-205ENST00000442708 FNIP2Q9P278 1114 aa17.25■□□□□ 0.35
USP39-205ENST00000442708 MTRRQ9UBK8 725 aa17.25■□□□□ 0.35
USP39-205ENST00000442708 DACH1Q9UI36 760 aa17.25■□□□□ 0.35
USP39-205ENST00000442708 MTCL1Q9Y4B5 1905 aaKnown RBP17.24■□□□□ 0.35
USP39-205ENST00000442708 PHACTR2O75167 634 aa17.24■□□□□ 0.35
USP39-205ENST00000442708 HLA-DRAP01903 254 aa17.24■□□□□ 0.35
USP39-205ENST00000442708 CYP11A1P05108 521 aa17.24■□□□□ 0.35
USP39-205ENST00000442708 LTBRP36941 435 aa17.24■□□□□ 0.35
USP39-205ENST00000442708 MARSP56192 900 aaKnown RBP17.24■□□□□ 0.35
USP39-205ENST00000442708 DLX2Q07687 328 aaPredicted RBP17.24■□□□□ 0.35
USP39-205ENST00000442708 NCOA4Q13772 614 aa17.24■□□□□ 0.35
USP39-205ENST00000442708 BMS1Q14692 1282 aaKnown RBP17.24■□□□□ 0.35
USP39-205ENST00000442708 CBWD6Q4V339 395 aa17.24■□□□□ 0.35
USP39-205ENST00000442708 CBWD3Q5JTY5 395 aa17.24■□□□□ 0.35
USP39-205ENST00000442708 CBWD5Q5RIA9 395 aa17.24■□□□□ 0.35
USP39-205ENST00000442708 WSCD1Q658N2 575 aa17.24■□□□□ 0.35
USP39-205ENST00000442708 LLGL2Q6P1M3 1020 aa17.24■□□□□ 0.35
USP39-205ENST00000442708 LIMS2Q7Z4I7 341 aa17.24■□□□□ 0.35
USP39-205ENST00000442708 TRIM59Q8IWR1 403 aa17.24■□□□□ 0.35
USP39-205ENST00000442708 EFHBQ8N7U6 833 aa17.24■□□□□ 0.35
USP39-205ENST00000442708 SEMA4DQ92854 862 aa17.24■□□□□ 0.35
USP39-205ENST00000442708 RTP3Q9BQQ7 232 aa17.24■□□□□ 0.35
USP39-205ENST00000442708 TMEM8AQ9HCN3 771 aa17.24■□□□□ 0.35
USP39-205ENST00000442708 ANO10Q9NW15 660 aa17.24■□□□□ 0.35
USP39-205ENST00000442708 FBXL5Q9UKA1 691 aa17.24■□□□□ 0.35
USP39-205ENST00000442708 L1RE1Q9UN81 338 aa17.24■□□□□ 0.35
USP39-205ENST00000442708 SSX2IPQ9Y2D8 614 aa17.24■□□□□ 0.35
USP39-205ENST00000442708 SYCE3A1L190 88 aa17.23■□□□□ 0.35
Retrieved 100 of 20,778 RNA–protein pairs in 62.8 ms