RNA–Protein interactions for RNA: ENST00000440097.5

LIMD1-202, Transcript of LIM domains containing 1, humanhuman

TSL 5 BASIC

Gene LIMD1, Length 2,773 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LIMD1-202ENST00000440097 E2F5Q15329 346 aa15.08■□□□□ 0.01
LIMD1-202ENST00000440097 ATF7IP2Q5U623 682 aa15.08■□□□□ 0.01
LIMD1-202ENST00000440097 TAPT1Q6NXT6 567 aa15.08■□□□□ 0.01
LIMD1-202ENST00000440097 PHLDB2Q86SQ0 1253 aa15.08■□□□□ 0.01
LIMD1-202ENST00000440097 SEC16BQ96JE7 1060 aa15.08■□□□□ 0.01
LIMD1-202ENST00000440097 HTTP42858 3142 aa15.08■□□□□ 0.01
LIMD1-202ENST00000440097 C11orf97A0A1B0GVM6 126 aaPredicted RBP15.08■□□□□ 0
LIMD1-202ENST00000440097 OGTO15294 1046 aa15.08■□□□□ 0
LIMD1-202ENST00000440097 ENPEPQ07075 957 aa15.08■□□□□ 0
LIMD1-202ENST00000440097 ZNF211Q13398 564 aaPredicted RBP15.08■□□□□ 0
LIMD1-202ENST00000440097 CUL2Q13617 745 aa15.08■□□□□ 0
LIMD1-202ENST00000440097 UAP1Q16222 522 aaPredicted RBP15.08■□□□□ 0
LIMD1-202ENST00000440097 CDCA2Q69YH5 1023 aaPredicted RBP15.08■□□□□ 0
LIMD1-202ENST00000440097 SCARA3Q6AZY7 606 aa15.08■□□□□ 0
LIMD1-202ENST00000440097 LRIG3Q6UXM1 1119 aa15.08■□□□□ 0
LIMD1-202ENST00000440097 ANKRD23Q86SG2 305 aa15.08■□□□□ 0
LIMD1-202ENST00000440097 BRSK2Q8IWQ3 736 aa15.08■□□□□ 0
LIMD1-202ENST00000440097 HES6Q96HZ4 224 aa15.08■□□□□ 0
LIMD1-202ENST00000440097 BUD13Q9BRD0 619 aaKnown RBP eCLIP15.08■□□□□ 01e-7■■■■□ 21.5
LIMD1-202ENST00000440097 NUP85Q9BW27 656 aa15.08■□□□□ 0
LIMD1-202ENST00000440097 ALG6Q9Y672 507 aa15.08■□□□□ 0
LIMD1-202ENST00000440097 IGKV6-21A0A0C4DH24 114 aa15.07■□□□□ 0
LIMD1-202ENST00000440097 H0YGN5 161 aa15.07■□□□□ 0
LIMD1-202ENST00000440097 FGGP02679 453 aa15.07■□□□□ 0
LIMD1-202ENST00000440097 TMEM191BP0C7N4 346 aa15.07■□□□□ 0
LIMD1-202ENST00000440097 SCTRP47872 440 aa15.07■□□□□ 0
LIMD1-202ENST00000440097 TRPC3Q13507 836 aa15.07■□□□□ 0
LIMD1-202ENST00000440097 BYSLQ13895 437 aaKnown RBP15.07■□□□□ 0
LIMD1-202ENST00000440097 SPRYD7Q5W111 196 aa15.07■□□□□ 0
LIMD1-202ENST00000440097 PASD1Q8IV76 773 aa15.07■□□□□ 0
LIMD1-202ENST00000440097 ZNF564Q8TBZ8 553 aaPredicted RBP15.07■□□□□ 0
LIMD1-202ENST00000440097 CPA5Q8WXQ8 436 aa15.07■□□□□ 0
LIMD1-202ENST00000440097 BTBD6Q96KE9 485 aa15.07■□□□□ 0
LIMD1-202ENST00000440097 CCDC113Q9H0I3 377 aa15.07■□□□□ 0
LIMD1-202ENST00000440097 GINS2Q9Y248 185 aa15.07■□□□□ 0
LIMD1-202ENST00000440097 PCDHB2Q9Y5E7 798 aa15.07■□□□□ 0
LIMD1-202ENST00000440097 NFS1Q9Y697 457 aa15.07■□□□□ 0
LIMD1-202ENST00000440097 CNTNAP2Q9UHC6 1331 aa15.07■□□□□ 0
LIMD1-202ENST00000440097 SPOPO43791 374 aa15.07■□□□□ 0
LIMD1-202ENST00000440097 VTNP04004 478 aa15.07■□□□□ 0
LIMD1-202ENST00000440097 CD58P19256 250 aa15.07■□□□□ 0
LIMD1-202ENST00000440097 ECHS1P30084 290 aa15.07■□□□□ 0
LIMD1-202ENST00000440097 MCCD1P59942 119 aaPredicted RBP15.07■□□□□ 0
LIMD1-202ENST00000440097 ZNF844Q08AG5 666 aa15.07■□□□□ 0
LIMD1-202ENST00000440097 C2CD6Q53TS8 623 aa15.07■□□□□ 0
LIMD1-202ENST00000440097 CCDC50Q8IVM0 306 aa15.07■□□□□ 0
LIMD1-202ENST00000440097 CEP120Q8N960 986 aa15.07■□□□□ 0
LIMD1-202ENST00000440097 ACTRT1Q8TDG2 376 aa15.07■□□□□ 0
LIMD1-202ENST00000440097 MINDY3Q9H8M7 445 aa15.07■□□□□ 0
LIMD1-202ENST00000440097 APOBEC3GQ9HC16 384 aaKnown RBP15.07■□□□□ 0
LIMD1-202ENST00000440097 STXBP5LQ9Y2K9 1186 aa15.07■□□□□ 0
LIMD1-202ENST00000440097 EVPLQ92817 2033 aa15.07■□□□□ 0
LIMD1-202ENST00000440097 UNCXA6NJT0 531 aa15.07■□□□□ 0
LIMD1-202ENST00000440097 CES2O00748 559 aa15.07■□□□□ 0
LIMD1-202ENST00000440097 EZRP15311 586 aaKnown RBP15.07■□□□□ 0
LIMD1-202ENST00000440097 BPIFB4P59827 614 aa15.07■□□□□ 0
LIMD1-202ENST00000440097 FKBP1BP68106 108 aa15.07■□□□□ 0
LIMD1-202ENST00000440097 ODF2Q5BJF6 829 aa15.07■□□□□ 0
LIMD1-202ENST00000440097 MPZL3Q6UWV2 235 aa15.07■□□□□ 0
LIMD1-202ENST00000440097 DDX42Q86XP3 938 aaKnown RBP eCLIP15.07■□□□□ 0
LIMD1-202ENST00000440097 C3orf20Q8ND61 904 aa15.07■□□□□ 0
LIMD1-202ENST00000440097 PPTC7Q8NI37 304 aa15.07■□□□□ 0
LIMD1-202ENST00000440097 DDX47Q9H0S4 455 aaKnown RBP15.07■□□□□ 0
LIMD1-202ENST00000440097 CNOT8Q9UFF9 292 aaKnown RBP15.07■□□□□ 0
LIMD1-202ENST00000440097 CPA4Q9UI42 421 aa15.07■□□□□ 0
LIMD1-202ENST00000440097 SLC45A1Q9Y2W3 748 aa15.07■□□□□ 0
LIMD1-202ENST00000440097 NUB1Q9Y5A7 615 aa15.07■□□□□ 0
LIMD1-202ENST00000440097 UMODL1Q5DID0 1318 aa15.06■□□□□ 0
LIMD1-202ENST00000440097 A0A087WZ62 844 aa15.06■□□□□ 0
LIMD1-202ENST00000440097 CCDC189A1A4V9 331 aa15.06■□□□□ 0
LIMD1-202ENST00000440097 H3BRB1 525 aa15.06■□□□□ 0
LIMD1-202ENST00000440097 ACKR2O00590 384 aa15.06■□□□□ 0
LIMD1-202ENST00000440097 C22orf31O95567 290 aa15.06■□□□□ 0
LIMD1-202ENST00000440097 CST3P01034 146 aaPredicted RBP15.06■□□□□ 0
LIMD1-202ENST00000440097 KRT19P08727 400 aa15.06■□□□□ 0
LIMD1-202ENST00000440097 CTNNA1P35221 906 aaKnown RBP15.06■□□□□ 0
LIMD1-202ENST00000440097 NSFP46459 744 aaKnown RBP15.06■□□□□ 0
LIMD1-202ENST00000440097 DUOXA2Q1HG44 320 aa15.06■□□□□ 0
LIMD1-202ENST00000440097 ZNF394Q53GI3 561 aa15.06■□□□□ 0
LIMD1-202ENST00000440097 CACNA2D3Q8IZS8 1091 aa15.06■□□□□ 0
LIMD1-202ENST00000440097 UBL4BQ8N7F7 174 aa15.06■□□□□ 0
LIMD1-202ENST00000440097 NLRP7Q8WX94 980 aa15.06■□□□□ 0
LIMD1-202ENST00000440097 DDX1Q92499 740 aaKnown RBP15.06■□□□□ 0
LIMD1-202ENST00000440097 RAPGEF5Q92565 580 aa15.06■□□□□ 0
LIMD1-202ENST00000440097 PTPN18Q99952 460 aa15.06■□□□□ 0
LIMD1-202ENST00000440097 FDXACB1Q9BRP7 624 aaPredicted RBP15.06■□□□□ 0
LIMD1-202ENST00000440097 TUT1Q9H6E5 874 aaKnown RBP15.06■□□□□ 0
LIMD1-202ENST00000440097 SNAI1O95863 264 aaPredicted RBP15.06■□□□□ 0
LIMD1-202ENST00000440097 CLTAP09496 248 aa15.06■□□□□ 0
LIMD1-202ENST00000440097 TBXAS1P24557 533 aaPredicted RBP15.06■□□□□ 0
LIMD1-202ENST00000440097 GNA15P30679 374 aa15.06■□□□□ 0
LIMD1-202ENST00000440097 PHKA2P46019 1235 aa15.06■□□□□ 0
LIMD1-202ENST00000440097 HUNKP57058 714 aa15.06■□□□□ 0
LIMD1-202ENST00000440097 ZNF484Q5JVG2 852 aa15.06■□□□□ 0
LIMD1-202ENST00000440097 EEF1DP3Q658K8 133 aa15.06■□□□□ 0
LIMD1-202ENST00000440097 ACAD10Q6JQN1 1059 aa15.06■□□□□ 0
LIMD1-202ENST00000440097 SCARA5Q6ZMJ2 495 aa15.06■□□□□ 0
LIMD1-202ENST00000440097 PLEKHH3Q7Z736 793 aa15.06■□□□□ 0
LIMD1-202ENST00000440097 WDR49Q8IV35 697 aa15.06■□□□□ 0
LIMD1-202ENST00000440097 ABRAQ8N0Z2 381 aa15.06■□□□□ 0
Retrieved 100 of 20,778 RNA–protein pairs in 22.3 ms