RNA–Protein interactions for RNA: ENST00000439316.6

CLCNKA-203, Transcript of chloride voltage-gated channel Ka, humanhuman

TSL 2 BASIC

Gene CLCNKA, Length 1,997 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLCNKA-203ENST00000439316 MOV10L1Q9BXT6 1211 aaKnown RBP17.42■□□□□ 0.38
CLCNKA-203ENST00000439316 DNAJC17Q9NVM6 304 aaKnown RBP17.42■□□□□ 0.38
CLCNKA-203ENST00000439316 AGAP1Q9UPQ3 857 aa17.42■□□□□ 0.38
CLCNKA-203ENST00000439316 A0A0G2JLL6 359 aaPredicted RBP17.41■□□□□ 0.38
CLCNKA-203ENST00000439316 HNRNPDLO14979 420 aaKnown RBP17.41■□□□□ 0.38
CLCNKA-203ENST00000439316 SUN1O94901 812 aa17.41■□□□□ 0.38
CLCNKA-203ENST00000439316 UBOX5O94941 541 aa17.41■□□□□ 0.38
CLCNKA-203ENST00000439316 STBD1O95210 358 aa17.41■□□□□ 0.38
CLCNKA-203ENST00000439316 RALAP11233 206 aa17.41■□□□□ 0.38
CLCNKA-203ENST00000439316 NSFP46459 744 aaKnown RBP17.41■□□□□ 0.38
CLCNKA-203ENST00000439316 SOX10P56693 466 aa17.41■□□□□ 0.38
CLCNKA-203ENST00000439316 BPIFB4P59827 614 aa17.41■□□□□ 0.38
CLCNKA-203ENST00000439316 CLDN10P78369 228 aa17.41■□□□□ 0.38
CLCNKA-203ENST00000439316 RIPK1Q13546 671 aa17.41■□□□□ 0.38
CLCNKA-203ENST00000439316 MPP2Q14168 576 aa17.41■□□□□ 0.38
CLCNKA-203ENST00000439316 CCNG2Q16589 344 aa17.41■□□□□ 0.38
CLCNKA-203ENST00000439316 LLGL2Q6P1M3 1020 aa17.41■□□□□ 0.38
CLCNKA-203ENST00000439316 PRRT2Q7Z6L0 340 aaPredicted RBP17.41■□□□□ 0.38
CLCNKA-203ENST00000439316 ZNF516Q92618 1163 aa17.41■□□□□ 0.38
CLCNKA-203ENST00000439316 FAM84AQ96KN4 292 aa17.41■□□□□ 0.38
CLCNKA-203ENST00000439316 RMDN3Q96TC7 470 aa17.41■□□□□ 0.38
CLCNKA-203ENST00000439316 FAM213AQ9BRX8 229 aa17.41■□□□□ 0.38
CLCNKA-203ENST00000439316 NOD2Q9HC29 1040 aa17.41■□□□□ 0.38
CLCNKA-203ENST00000439316 RNF146Q9NTX7 359 aa17.41■□□□□ 0.38
CLCNKA-203ENST00000439316 O00370 1275 aa17.4■□□□□ 0.38
CLCNKA-203ENST00000439316 ZNF862O60290 1169 aa17.4■□□□□ 0.38
CLCNKA-203ENST00000439316 GJB6O95452 261 aa17.4■□□□□ 0.38
CLCNKA-203ENST00000439316 BRAFP15056 766 aa17.4■□□□□ 0.38
CLCNKA-203ENST00000439316 OAZ1P54368 228 aa17.4■□□□□ 0.38
CLCNKA-203ENST00000439316 RTP1P59025 263 aa17.4■□□□□ 0.38
CLCNKA-203ENST00000439316 NCALDP61601 193 aa17.4■□□□□ 0.38
CLCNKA-203ENST00000439316 TAS1R3Q7RTX0 852 aa17.4■□□□□ 0.38
CLCNKA-203ENST00000439316 KATNAL2Q8IYT4 538 aa17.4■□□□□ 0.38
CLCNKA-203ENST00000439316 ANKRD42Q8N9B4 389 aa17.4■□□□□ 0.38
CLCNKA-203ENST00000439316 OPTNQ96CV9 577 aa17.4■□□□□ 0.38
CLCNKA-203ENST00000439316 FAM212AQ96EL1 285 aa17.4■□□□□ 0.38
CLCNKA-203ENST00000439316 CEP170P1Q96L14 293 aa17.4■□□□□ 0.38
CLCNKA-203ENST00000439316 PDLIM7Q9NR12 457 aa17.4■□□□□ 0.38
CLCNKA-203ENST00000439316 EURLQ9NYK6 297 aa17.4■□□□□ 0.38
CLCNKA-203ENST00000439316 PCDHA10Q9Y5I2 948 aa17.4■□□□□ 0.38
CLCNKA-203ENST00000439316 LOC285556D6RIA3 1793 aa17.4■□□□□ 0.38
CLCNKA-203ENST00000439316 TESPA1A2RU30 521 aaPredicted RBP17.4■□□□□ 0.38
CLCNKA-203ENST00000439316 CETPP11597 493 aa17.4■□□□□ 0.38
CLCNKA-203ENST00000439316 MKRN3Q13064 507 aaKnown RBP17.4■□□□□ 0.38
CLCNKA-203ENST00000439316 PSMD6Q15008 389 aa17.4■□□□□ 0.38
CLCNKA-203ENST00000439316 NUGGCQ68CJ6 796 aa17.4■□□□□ 0.38
CLCNKA-203ENST00000439316 SPATA21Q7Z572 469 aa17.4■□□□□ 0.38
CLCNKA-203ENST00000439316 PHLDB2Q86SQ0 1253 aa17.4■□□□□ 0.38
CLCNKA-203ENST00000439316 CEP57Q86XR8 500 aa17.4■□□□□ 0.38
CLCNKA-203ENST00000439316 RHOT1Q8IXI2 618 aa17.4■□□□□ 0.38
CLCNKA-203ENST00000439316 CYP4X1Q8N118 509 aa17.4■□□□□ 0.38
CLCNKA-203ENST00000439316 GBP7Q8N8V2 638 aaPredicted RBP17.4■□□□□ 0.38
CLCNKA-203ENST00000439316 CCDC89Q8N998 374 aa17.4■□□□□ 0.38
CLCNKA-203ENST00000439316 PWWP2AQ96N64 755 aa17.4■□□□□ 0.38
CLCNKA-203ENST00000439316 KCNK9Q9NPC2 374 aa17.4■□□□□ 0.38
CLCNKA-203ENST00000439316 ACTL7BQ9Y614 415 aa17.4■□□□□ 0.38
CLCNKA-203ENST00000439316 FOXO6A8MYZ6 492 aa17.39■□□□□ 0.37
CLCNKA-203ENST00000439316 CXCL11O14625 94 aa17.39■□□□□ 0.37
CLCNKA-203ENST00000439316 EXTL3O43909 919 aa17.39■□□□□ 0.37
CLCNKA-203ENST00000439316 CDH16O75309 829 aa17.39■□□□□ 0.37
CLCNKA-203ENST00000439316 ACO1P21399 889 aaKnown RBP17.39■□□□□ 0.37
CLCNKA-203ENST00000439316 VPS41P49754 854 aa17.39■□□□□ 0.37
CLCNKA-203ENST00000439316 TAS2R40P59535 323 aa17.39■□□□□ 0.37
CLCNKA-203ENST00000439316 PPIL2Q13356 520 aa17.39■□□□□ 0.37
CLCNKA-203ENST00000439316 ZACNQ401N2 412 aa17.39■□□□□ 0.37
CLCNKA-203ENST00000439316 LDLRAD1Q5T700 205 aa17.39■□□□□ 0.37
CLCNKA-203ENST00000439316 LIN9Q5TKA1 542 aa17.39■□□□□ 0.37
CLCNKA-203ENST00000439316 DAB2IPQ5VWQ8 1189 aa17.39■□□□□ 0.37
CLCNKA-203ENST00000439316 IZUMO3Q5VZ72 239 aa17.39■□□□□ 0.37
CLCNKA-203ENST00000439316 TRIM72Q6ZMU5 477 aa17.39■□□□□ 0.37
CLCNKA-203ENST00000439316 ZNF365Q70YC5 407 aa17.39■□□□□ 0.37
CLCNKA-203ENST00000439316 MCPH1Q8NEM0 835 aa17.39■□□□□ 0.37
CLCNKA-203ENST00000439316 PLCD4Q9BRC7 762 aa17.39■□□□□ 0.37
CLCNKA-203ENST00000439316 HEMGNQ9BXL5 484 aa17.39■□□□□ 0.37
CLCNKA-203ENST00000439316 TEX13BQ9BXU2 312 aa17.39■□□□□ 0.37
CLCNKA-203ENST00000439316 XPNPEP1Q9NQW7 623 aa17.39■□□□□ 0.37
CLCNKA-203ENST00000439316 ARHGAP28Q9P2N2 729 aa17.39■□□□□ 0.37
CLCNKA-203ENST00000439316 GABBR1Q9UBS5 961 aa17.39■□□□□ 0.37
CLCNKA-203ENST00000439316 PRKAG3Q9UGI9 489 aa17.39■□□□□ 0.37
CLCNKA-203ENST00000439316 ARL2BPQ9Y2Y0 163 aa17.39■□□□□ 0.37
CLCNKA-203ENST00000439316 GH1P01241 217 aa17.39■□□□□ 0.37
CLCNKA-203ENST00000439316 HLA-DRAP01903 254 aa17.39■□□□□ 0.37
CLCNKA-203ENST00000439316 ABHD2P08910 425 aa17.39■□□□□ 0.37
CLCNKA-203ENST00000439316 EZRP15311 586 aaKnown RBP17.39■□□□□ 0.37
CLCNKA-203ENST00000439316 KLRC2P26717 231 aa17.39■□□□□ 0.37
CLCNKA-203ENST00000439316 NOMO3P69849 1222 aa17.39■□□□□ 0.37
CLCNKA-203ENST00000439316 BNIP1Q12981 228 aa17.39■□□□□ 0.37
CLCNKA-203ENST00000439316 STAT4Q14765 748 aa17.39■□□□□ 0.37
CLCNKA-203ENST00000439316 C2CD6Q53TS8 623 aa17.39■□□□□ 0.37
CLCNKA-203ENST00000439316 WDR44Q5JSH3 913 aa17.39■□□□□ 0.37
CLCNKA-203ENST00000439316 ARHGEF16Q5VV41 709 aa17.39■□□□□ 0.37
CLCNKA-203ENST00000439316 XRRA1Q6P2D8 792 aa17.39■□□□□ 0.37
CLCNKA-203ENST00000439316 CRELD2Q6UXH1 353 aaPredicted RBP17.39■□□□□ 0.37
CLCNKA-203ENST00000439316 TBC1D1Q86TI0 1168 aaPredicted RBP17.39■□□□□ 0.37
CLCNKA-203ENST00000439316 GADD45GIP1Q8TAE8 222 aaPredicted RBP17.39■□□□□ 0.37
CLCNKA-203ENST00000439316 ATP6V0A1Q93050 837 aa17.39■□□□□ 0.37
CLCNKA-203ENST00000439316 GPRASP2Q96D09 838 aa17.39■□□□□ 0.37
CLCNKA-203ENST00000439316 BICD1Q96G01 975 aa17.39■□□□□ 0.37
CLCNKA-203ENST00000439316 OSBPL8Q9BZF1 889 aa17.39■□□□□ 0.37
CLCNKA-203ENST00000439316 KIAA1586Q9HCI6 787 aa17.39■□□□□ 0.37
Retrieved 100 of 20,778 RNA–protein pairs in 46.9 ms