RNA–Protein interactions for RNA: ENST00000439080.6

TARDBP-203, Transcript of TAR DNA binding protein, humanhuman

TSL 2

Gene TARDBP, Length 1,388 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TARDBP-203ENST00000439080 TDRD10Q5VZ19 366 aaKnown RBP18.23■□□□□ 0.51
TARDBP-203ENST00000439080 PRSS55Q6UWB4 352 aaPredicted RBP18.23■□□□□ 0.51
TARDBP-203ENST00000439080 DSTYKQ6XUX3 929 aa18.23■□□□□ 0.51
TARDBP-203ENST00000439080 LRRC52Q8N7C0 313 aa18.23■□□□□ 0.51
TARDBP-203ENST00000439080 BORCS6Q96GS4 357 aa18.23■□□□□ 0.51
TARDBP-203ENST00000439080 MED15Q96RN5 788 aa18.23■□□□□ 0.51
TARDBP-203ENST00000439080 TLE6Q9H808 572 aa18.23■□□□□ 0.51
TARDBP-203ENST00000439080 PCDHB8Q9UN66 801 aa18.23■□□□□ 0.51
TARDBP-203ENST00000439080 R3HCC1Q9Y3T6 440 aaKnown RBP18.23■□□□□ 0.51
TARDBP-203ENST00000439080 MTCL1Q9Y4B5 1905 aaKnown RBP18.23■□□□□ 0.51
TARDBP-203ENST00000439080 M0QZQ0 153 aa18.22■□□□□ 0.51
TARDBP-203ENST00000439080 PER2O15055 1255 aa18.22■□□□□ 0.51
TARDBP-203ENST00000439080 ODC1P11926 461 aa18.22■□□□□ 0.51
TARDBP-203ENST00000439080 GTF2F1P35269 517 aaKnown RBP eCLIP18.22■□□□□ 0.517e-26■■■□□ 18.2
TARDBP-203ENST00000439080 BIRC3Q13489 604 aa18.22■□□□□ 0.51
TARDBP-203ENST00000439080 DCAF17Q5H9S7 520 aaPredicted RBP18.22■□□□□ 0.51
TARDBP-203ENST00000439080 PIK3R5Q8WYR1 880 aa18.22■□□□□ 0.51
TARDBP-203ENST00000439080 EMILIN2Q9BXX0 1053 aa18.22■□□□□ 0.51
TARDBP-203ENST00000439080 MMRN2Q9H8L6 949 aa18.22■□□□□ 0.51
TARDBP-203ENST00000439080 APOBEC3CQ9NRW3 190 aaKnown RBP eCLIP18.22■□□□□ 0.51
TARDBP-203ENST00000439080 ARMCX3Q9UH62 379 aaPredicted RBP18.22■□□□□ 0.51
TARDBP-203ENST00000439080 BRWD1Q9NSI6 2320 aa18.21■□□□□ 0.51
TARDBP-203ENST00000439080 IKBKBO14920 756 aa18.21■□□□□ 0.51
TARDBP-203ENST00000439080 CNPP09543 421 aaKnown RBP18.21■□□□□ 0.51
TARDBP-203ENST00000439080 PAX3P23760 479 aa18.21■□□□□ 0.51
TARDBP-203ENST00000439080 ERCC5P28715 1186 aaPredicted RBP18.21■□□□□ 0.51
TARDBP-203ENST00000439080 CREMQ03060 361 aa18.21■□□□□ 0.51
TARDBP-203ENST00000439080 SKIV2LQ15477 1246 aaKnown RBP18.21■□□□□ 0.51
TARDBP-203ENST00000439080 CCDC40Q4G0X9 1142 aa18.21■□□□□ 0.51
TARDBP-203ENST00000439080 VARS2Q5ST30 1063 aaKnown RBP18.21■□□□□ 0.51
TARDBP-203ENST00000439080 PDXDC1Q6P996 788 aa18.21■□□□□ 0.51
TARDBP-203ENST00000439080 FILIP1Q7Z7B0 1213 aa18.21■□□□□ 0.51
TARDBP-203ENST00000439080 GPR65Q8IYL9 337 aa18.21■□□□□ 0.51
TARDBP-203ENST00000439080 LNX1Q8TBB1 728 aaPredicted RBP18.21■□□□□ 0.51
TARDBP-203ENST00000439080 SENP8Q96LD8 212 aa18.21■□□□□ 0.51
TARDBP-203ENST00000439080 CDCA3Q99618 268 aaPredicted RBP18.21■□□□□ 0.51
TARDBP-203ENST00000439080 SRRTQ9BXP5 876 aaKnown RBP18.21■□□□□ 0.51
TARDBP-203ENST00000439080 IGFLR1Q9H665 355 aa18.21■□□□□ 0.51
TARDBP-203ENST00000439080 ANO10Q9NW15 660 aa18.21■□□□□ 0.51
TARDBP-203ENST00000439080 KPNA7A9QM74 516 aa18.2■□□□□ 0.5
TARDBP-203ENST00000439080 TEX28O15482 410 aa18.2■□□□□ 0.5
TARDBP-203ENST00000439080 PHACTR2O75167 634 aa18.2■□□□□ 0.5
TARDBP-203ENST00000439080 C4BPAP04003 597 aaKnown RBP18.2■□□□□ 0.5
TARDBP-203ENST00000439080 ADH1AP07327 375 aa18.2■□□□□ 0.5
TARDBP-203ENST00000439080 RPL17P18621 184 aaKnown RBP18.2■□□□□ 0.5
TARDBP-203ENST00000439080 GCLMP48507 274 aa18.2■□□□□ 0.5
TARDBP-203ENST00000439080 TYRO3Q06418 890 aa18.2■□□□□ 0.5
TARDBP-203ENST00000439080 PPP3CAQ08209 521 aa18.2■□□□□ 0.5
TARDBP-203ENST00000439080 MYO1EQ12965 1108 aa18.2■□□□□ 0.5
TARDBP-203ENST00000439080 TRPC3Q13507 836 aa18.2■□□□□ 0.5
TARDBP-203ENST00000439080 ZACNQ401N2 412 aa18.2■□□□□ 0.5
TARDBP-203ENST00000439080 TCERG1LQ5VWI1 586 aa18.2■□□□□ 0.5
TARDBP-203ENST00000439080 C11orf57Q6ZUT1 292 aaPredicted RBP18.2■□□□□ 0.5
TARDBP-203ENST00000439080 FRMD5Q7Z6J6 570 aa18.2■□□□□ 0.5
TARDBP-203ENST00000439080 APPL2Q8NEU8 664 aa18.2■□□□□ 0.5
TARDBP-203ENST00000439080 HPDLQ96IR7 371 aa18.2■□□□□ 0.5
TARDBP-203ENST00000439080 KLHL5Q96PQ7 755 aa18.2■□□□□ 0.5
TARDBP-203ENST00000439080 RXFP1Q9HBX9 757 aa18.2■□□□□ 0.5
TARDBP-203ENST00000439080 METTL14Q9HCE5 456 aaKnown RBP18.2■□□□□ 0.5
TARDBP-203ENST00000439080 MTRRQ9UBK8 725 aa18.2■□□□□ 0.5
TARDBP-203ENST00000439080 TIMM13Q9Y5L4 95 aaPredicted RBP18.2■□□□□ 0.5
TARDBP-203ENST00000439080 FSD2A1L4K1 749 aa18.19■□□□□ 0.5
TARDBP-203ENST00000439080 LINC01565O15544 149 aa18.19■□□□□ 0.5
TARDBP-203ENST00000439080 CLASP2O75122 1294 aaKnown RBP18.19■□□□□ 0.5
TARDBP-203ENST00000439080 CLSTN1O94985 981 aa18.19■□□□□ 0.5
TARDBP-203ENST00000439080 FGFR1OPO95684 399 aaKnown RBP18.19■□□□□ 0.5
TARDBP-203ENST00000439080 GNA14O95837 355 aa18.19■□□□□ 0.5
TARDBP-203ENST00000439080 PIK3CAP42336 1068 aa18.19■□□□□ 0.5
TARDBP-203ENST00000439080 NDUFV1P49821 464 aa18.19■□□□□ 0.5
TARDBP-203ENST00000439080 MCCD1P59942 119 aaPredicted RBP18.19■□□□□ 0.5
TARDBP-203ENST00000439080 NCOA4Q13772 614 aa18.19■□□□□ 0.5
TARDBP-203ENST00000439080 NFKBIBQ15653 356 aa18.19■□□□□ 0.5
TARDBP-203ENST00000439080 SKOR2Q2VWA4 1001 aaPredicted RBP18.19■□□□□ 0.5
TARDBP-203ENST00000439080 CT47A1Q5JQC4 288 aaPredicted RBP18.19■□□□□ 0.5
TARDBP-203ENST00000439080 ZNF280DQ6N043 979 aa18.19■□□□□ 0.5
TARDBP-203ENST00000439080 C15orf39Q6ZRI6 1047 aa18.19■□□□□ 0.5
TARDBP-203ENST00000439080 ANKS3Q6ZW76 656 aa18.19■□□□□ 0.5
TARDBP-203ENST00000439080 SV2AQ7L0J3 742 aa18.19■□□□□ 0.5
TARDBP-203ENST00000439080 GLYCTKQ8IVS8 523 aa18.19■□□□□ 0.5
TARDBP-203ENST00000439080 EFHBQ8N7U6 833 aa18.19■□□□□ 0.5
TARDBP-203ENST00000439080 TMEM8AQ9HCN3 771 aa18.19■□□□□ 0.5
TARDBP-203ENST00000439080 FNIP2Q9P278 1114 aa18.19■□□□□ 0.5
TARDBP-203ENST00000439080 ARHGEF37A1IGU5 675 aa18.18■□□□□ 0.5
TARDBP-203ENST00000439080 CYB561D2O14569 222 aa18.18■□□□□ 0.5
TARDBP-203ENST00000439080 STX10O60499 249 aa18.18■□□□□ 0.5
TARDBP-203ENST00000439080 VNN1O95497 513 aa18.18■□□□□ 0.5
TARDBP-203ENST00000439080 GLP2RO95838 553 aa18.18■□□□□ 0.5
TARDBP-203ENST00000439080 CST3P01034 146 aaPredicted RBP18.18■□□□□ 0.5
TARDBP-203ENST00000439080 TYMPP19971 482 aa18.18■□□□□ 0.5
TARDBP-203ENST00000439080 MXI1P50539 228 aa18.18■□□□□ 0.5
TARDBP-203ENST00000439080 MYL6P60660 151 aa18.18■□□□□ 0.5
TARDBP-203ENST00000439080 RBM10P98175 930 aaKnown RBP18.18■□□□□ 0.5
TARDBP-203ENST00000439080 YWHAHQ04917 246 aaPredicted RBP18.18■□□□□ 0.5
TARDBP-203ENST00000439080 COL19A1Q14993 1142 aa18.18■□□□□ 0.5
TARDBP-203ENST00000439080 TPD52L1Q16890 204 aaPredicted RBP18.18■□□□□ 0.5
TARDBP-203ENST00000439080 LLGL2Q6P1M3 1020 aa18.18■□□□□ 0.5
TARDBP-203ENST00000439080 VN1R2Q8NFZ6 395 aa18.18■□□□□ 0.5
TARDBP-203ENST00000439080 SLC35C1Q96A29 364 aa18.18■□□□□ 0.5
TARDBP-203ENST00000439080 PABPC5Q96DU9 382 aaKnown RBP18.18■□□□□ 0.5
TARDBP-203ENST00000439080 CNOT6LQ96LI5 555 aaKnown RBP18.18■□□□□ 0.5
Retrieved 100 of 20,778 RNA–protein pairs in 24.5 ms