RNA–Protein interactions for RNA: ENST00000437600.8

CUX1-206, Transcript of cut like homeobox 1, humanhuman

TSL 1 (best) BASIC

Gene CUX1, Length 3,031 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Exosome, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CUX1-206ENST00000437600 DDX23Q9BUQ8 820 aaKnown RBP10.09□□□□□ -0.79
CUX1-206ENST00000437600 SLITRK6Q9H5Y7 841 aa10.09□□□□□ -0.79
CUX1-206ENST00000437600 C10orf88Q9H8K7 445 aa10.09□□□□□ -0.79
CUX1-206ENST00000437600 C1orf112Q9NSG2 853 aa10.09□□□□□ -0.79
CUX1-206ENST00000437600 ZDHHC18Q9NUE0 388 aa10.09□□□□□ -0.79
CUX1-206ENST00000437600 FAM169AQ9Y6X4 670 aa10.09□□□□□ -0.79
CUX1-206ENST00000437600 IVNS1ABPQ9Y6Y0 642 aa10.09□□□□□ -0.79
CUX1-206ENST00000437600 DNAJC25-GNG10A0A024R161 153 aa10.09□□□□□ -0.79
CUX1-206ENST00000437600 MANSC4A6NHS7 340 aaPredicted RBP10.09□□□□□ -0.79
CUX1-206ENST00000437600 PIAS1O75925 651 aa10.09□□□□□ -0.79
CUX1-206ENST00000437600 CREB1P16220 341 aa10.09□□□□□ -0.79
CUX1-206ENST00000437600 MDH1P40925 334 aaKnown RBP10.09□□□□□ -0.79
CUX1-206ENST00000437600 PTGIRP43119 386 aa10.09□□□□□ -0.79
CUX1-206ENST00000437600 PPP1R7Q15435 360 aa10.09□□□□□ -0.79
CUX1-206ENST00000437600 WDR44Q5JSH3 913 aa10.09□□□□□ -0.79
CUX1-206ENST00000437600 PRAMEF19Q5SWL8 479 aa10.09□□□□□ -0.79
CUX1-206ENST00000437600 CELF3Q5SZQ8 465 aaKnown RBP10.09□□□□□ -0.79
CUX1-206ENST00000437600 SEL1L2Q5TEA6 688 aa10.09□□□□□ -0.79
CUX1-206ENST00000437600 MMS22LQ6ZRQ5 1243 aa10.09□□□□□ -0.79
CUX1-206ENST00000437600 B4GALNT4Q76KP1 1039 aa10.09□□□□□ -0.79
CUX1-206ENST00000437600 DPH6Q7L8W6 267 aa10.09□□□□□ -0.79
CUX1-206ENST00000437600 SLC13A5Q86YT5 568 aaPredicted RBP10.09□□□□□ -0.79
CUX1-206ENST00000437600 EPS8L3Q8TE67 593 aaKnown RBP10.09□□□□□ -0.79
CUX1-206ENST00000437600 HAUS1Q96CS2 278 aa10.09□□□□□ -0.79
CUX1-206ENST00000437600 CCT8L2Q96SF2 557 aa10.09□□□□□ -0.79
CUX1-206ENST00000437600 NCAPGQ9BPX3 1015 aa10.09□□□□□ -0.79
CUX1-206ENST00000437600 EPB41L4BQ9H329 900 aa10.09□□□□□ -0.79
CUX1-206ENST00000437600 ST6GALNAC4Q9H4F1 302 aa10.09□□□□□ -0.79
CUX1-206ENST00000437600 GINS2Q9Y248 185 aa10.09□□□□□ -0.79
CUX1-206ENST00000437600 GZMAP12544 262 aa10.09□□□□□ -0.79
CUX1-206ENST00000437600 PMS2P54278 862 aa10.09□□□□□ -0.79
CUX1-206ENST00000437600 TAS2R40P59535 323 aa10.09□□□□□ -0.79
CUX1-206ENST00000437600 CCL14Q16627 93 aa10.09□□□□□ -0.79
CUX1-206ENST00000437600 QPCTQ16769 361 aa10.09□□□□□ -0.79
CUX1-206ENST00000437600 DEFB115Q30KQ5 88 aa10.09□□□□□ -0.79
CUX1-206ENST00000437600 DPP9Q86TI2 863 aa10.09□□□□□ -0.79
CUX1-206ENST00000437600 MICALL1Q8N3F8 863 aa10.09□□□□□ -0.79
CUX1-206ENST00000437600 MREGQ8N565 214 aa10.09□□□□□ -0.79
CUX1-206ENST00000437600 LENG1Q96BZ8 264 aaPredicted RBP10.09□□□□□ -0.79
CUX1-206ENST00000437600 MRRFQ96E11 262 aaKnown RBP10.09□□□□□ -0.79
CUX1-206ENST00000437600 CCDC114Q96M63 670 aa10.09□□□□□ -0.79
CUX1-206ENST00000437600 FBXL18Q96ME1 805 aa10.09□□□□□ -0.79
CUX1-206ENST00000437600 CEP89Q96ST8 783 aa10.09□□□□□ -0.79
CUX1-206ENST00000437600 TIPINQ9BVW5 301 aa10.09□□□□□ -0.79
CUX1-206ENST00000437600 NRBP2Q9NSY0 501 aa10.09□□□□□ -0.79
CUX1-206ENST00000437600 GRHL1Q9NZI5 618 aa10.09□□□□□ -0.79
CUX1-206ENST00000437600 SAE1Q9UBE0 346 aaPredicted RBP10.09□□□□□ -0.79
CUX1-206ENST00000437600 COQ4Q9Y3A0 265 aa10.09□□□□□ -0.79
CUX1-206ENST00000437600 LOXHD1Q8IVV2 1947 aa10.08□□□□□ -0.8
CUX1-206ENST00000437600 MROH7Q68CQ1 1323 aa10.08□□□□□ -0.8
CUX1-206ENST00000437600 IGKV6D-21A0A0A0MT36 114 aa10.08□□□□□ -0.8
CUX1-206ENST00000437600 UNCXA6NJT0 531 aa10.08□□□□□ -0.8
CUX1-206ENST00000437600 PIK3R2O00459 728 aa10.08□□□□□ -0.8
CUX1-206ENST00000437600 P4HA2O15460 535 aa10.08□□□□□ -0.8
CUX1-206ENST00000437600 B4GALT5O43286 388 aa10.08□□□□□ -0.8
CUX1-206ENST00000437600 THAP12O43422 761 aa10.08□□□□□ -0.8
CUX1-206ENST00000437600 RPS6KA5O75582 802 aa10.08□□□□□ -0.8
CUX1-206ENST00000437600 C4BPAP04003 597 aaKnown RBP10.08□□□□□ -0.8
CUX1-206ENST00000437600 CYP2B6P20813 491 aa10.08□□□□□ -0.8
CUX1-206ENST00000437600 ANXA13P27216 316 aa10.08□□□□□ -0.8
CUX1-206ENST00000437600 SGO2Q562F6 1265 aa10.08□□□□□ -0.8
CUX1-206ENST00000437600 CAPN12Q6ZSI9 719 aa10.08□□□□□ -0.8
CUX1-206ENST00000437600 MCOLN2Q8IZK6 566 aa10.08□□□□□ -0.8
CUX1-206ENST00000437600 NPLOC4Q8TAT6 608 aa10.08□□□□□ -0.8
CUX1-206ENST00000437600 PSPC1Q8WXF1 523 aaKnown RBP10.08□□□□□ -0.8
CUX1-206ENST00000437600 CD101Q93033 1021 aa10.08□□□□□ -0.8
CUX1-206ENST00000437600 TBK1Q9UHD2 729 aa10.08□□□□□ -0.8
CUX1-206ENST00000437600 INO80B-WBP1J3KQ70 363 aa10.08□□□□□ -0.8
CUX1-206ENST00000437600 TRPA1O75762 1119 aa10.08□□□□□ -0.8
CUX1-206ENST00000437600 RALAP11233 206 aa10.08□□□□□ -0.8
CUX1-206ENST00000437600 CHKAP35790 457 aa10.08□□□□□ -0.8
CUX1-206ENST00000437600 COILP38432 576 aaPredicted RBP10.08□□□□□ -0.8
CUX1-206ENST00000437600 NSFP46459 744 aaKnown RBP10.08□□□□□ -0.8
CUX1-206ENST00000437600 IFNAR2P48551 515 aa10.08□□□□□ -0.8
CUX1-206ENST00000437600 RWDD2BP57060 319 aa10.08□□□□□ -0.8
CUX1-206ENST00000437600 IFT88Q13099 833 aa10.08□□□□□ -0.8
CUX1-206ENST00000437600 LRRC14Q15048 493 aa10.08□□□□□ -0.8
CUX1-206ENST00000437600 LONRF1Q17RB8 773 aa10.08□□□□□ -0.8
CUX1-206ENST00000437600 FAM110CQ1W6H9 321 aa10.08□□□□□ -0.8
CUX1-206ENST00000437600 CLEC16AQ2KHT3 1053 aa10.08□□□□□ -0.8
CUX1-206ENST00000437600 RNF187Q5TA31 235 aaPredicted RBP10.08□□□□□ -0.8
CUX1-206ENST00000437600 FAM160B1Q5W0V3 765 aa10.08□□□□□ -0.8
CUX1-206ENST00000437600 TXNRD3NBQ6F5E7 133 aa10.08□□□□□ -0.8
CUX1-206ENST00000437600 TMEM192Q8IY95 271 aa10.08□□□□□ -0.8
CUX1-206ENST00000437600 MGARPQ8TDB4 240 aa10.08□□□□□ -0.8
CUX1-206ENST00000437600 AFG1LQ8WV93 481 aa10.08□□□□□ -0.8
CUX1-206ENST00000437600 SELENOSQ9BQE4 189 aa10.08□□□□□ -0.8
CUX1-206ENST00000437600 INO80BQ9C086 356 aaPredicted RBP10.08□□□□□ -0.8
CUX1-206ENST00000437600 MTMR12Q9C0I1 747 aa10.08□□□□□ -0.8
CUX1-206ENST00000437600 CTNNAL1Q9UBT7 734 aa10.08□□□□□ -0.8
CUX1-206ENST00000437600 NXF1Q9UBU9 619 aaKnown RBP10.08□□□□□ -0.8
CUX1-206ENST00000437600 TJP2Q9UDY2 1190 aa10.08□□□□□ -0.8
CUX1-206ENST00000437600 ASIC3Q9UHC3 531 aa10.08□□□□□ -0.8
CUX1-206ENST00000437600 PCDHA3Q9Y5H8 950 aa10.08□□□□□ -0.8
CUX1-206ENST00000437600 ZBTB42B2RXF5 422 aa10.07□□□□□ -0.8
CUX1-206ENST00000437600 HGSO14964 777 aaPredicted RBP10.07□□□□□ -0.8
CUX1-206ENST00000437600 EXTL3O43909 919 aa10.07□□□□□ -0.8
CUX1-206ENST00000437600 CYP1A2P05177 515 aa10.07□□□□□ -0.8
CUX1-206ENST00000437600 TGFB3P10600 412 aa10.07□□□□□ -0.8
CUX1-206ENST00000437600 UNGP13051 313 aaPredicted RBP10.07□□□□□ -0.8
Retrieved 100 of 20,778 RNA–protein pairs in 26.8 ms