RNA–Protein interactions for RNA: ENST00000437124.6

DDR1-237, Transcript of discoidin domain receptor tyrosine kinase 1, humanhuman

TSL 4

Gene DDR1, Length 587 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDR1-237ENST00000437124 BRD9Q9H8M2 597 aa16.46■□□□□ 0.23
DDR1-237ENST00000437124 LMAN1LQ9HAT1 526 aa16.46■□□□□ 0.23
DDR1-237ENST00000437124 ZFP14Q9HCL3 533 aa16.46■□□□□ 0.23
DDR1-237ENST00000437124 CNTN3Q9P232 1028 aa16.46■□□□□ 0.23
DDR1-237ENST00000437124 KCNG1Q9UIX4 513 aa16.46■□□□□ 0.23
DDR1-237ENST00000437124 CDY1Q9Y6F8 540 aa16.46■□□□□ 0.23
DDR1-237ENST00000437124 CNOT1A5YKK6 2376 aaKnown RBP16.46■□□□□ 0.23
DDR1-237ENST00000437124 COL4A2P08572 1712 aa16.45■□□□□ 0.22
DDR1-237ENST00000437124 ARHGEF37A1IGU5 675 aa16.45■□□□□ 0.22
DDR1-237ENST00000437124 PODXLO00592 558 aa16.45■□□□□ 0.22
DDR1-237ENST00000437124 TOM1L1O75674 476 aa16.45■□□□□ 0.22
DDR1-237ENST00000437124 PAPSS2O95340 614 aaPredicted RBP16.45■□□□□ 0.22
DDR1-237ENST00000437124 PLA2G4BP0C869 781 aa16.45■□□□□ 0.22
DDR1-237ENST00000437124 MAPTP10636 758 aaKnown RBP16.45■□□□□ 0.22
DDR1-237ENST00000437124 CEBPBP17676 345 aa16.45■□□□□ 0.22
DDR1-237ENST00000437124 CXCL12P48061 93 aa16.45■□□□□ 0.22
DDR1-237ENST00000437124 LIMK1P53667 647 aa16.45■□□□□ 0.22
DDR1-237ENST00000437124 SMTNP53814 917 aa16.45■□□□□ 0.22
DDR1-237ENST00000437124 DMWDQ09019 674 aa16.45■□□□□ 0.22
DDR1-237ENST00000437124 TMEM119Q4V9L6 283 aa16.45■□□□□ 0.22
DDR1-237ENST00000437124 PRSS36Q5K4E3 855 aa16.45■□□□□ 0.22
DDR1-237ENST00000437124 FAM3CQ92520 227 aa16.45■□□□□ 0.22
DDR1-237ENST00000437124 TRMT61BQ9BVS5 477 aaKnown RBP16.45■□□□□ 0.22
DDR1-237ENST00000437124 ZNF334Q9HCZ1 680 aaPredicted RBP16.45■□□□□ 0.22
DDR1-237ENST00000437124 KCND2Q9NZV8 630 aa16.45■□□□□ 0.22
DDR1-237ENST00000437124 ZZEF1O43149 2961 aa16.45■□□□□ 0.22
DDR1-237ENST00000437124 HRO43593 1189 aa16.44■□□□□ 0.22
DDR1-237ENST00000437124 GDF9O60383 454 aa16.44■□□□□ 0.22
DDR1-237ENST00000437124 CHRNB1P11230 501 aa16.44■□□□□ 0.22
DDR1-237ENST00000437124 HARSP12081 509 aaKnown RBP16.44■□□□□ 0.22
DDR1-237ENST00000437124 MCM2P49736 904 aa16.44■□□□□ 0.22
DDR1-237ENST00000437124 STRN3Q13033 797 aa16.44■□□□□ 0.22
DDR1-237ENST00000437124 ARSHQ5FYA8 562 aa16.44■□□□□ 0.22
DDR1-237ENST00000437124 FAM78AQ5JUQ0 283 aa16.44■□□□□ 0.22
DDR1-237ENST00000437124 SLC8B1Q6J4K2 584 aa16.44■□□□□ 0.22
DDR1-237ENST00000437124 ZPBP2Q6X784 338 aa16.44■□□□□ 0.22
DDR1-237ENST00000437124 SPEM1Q8N4L4 309 aa16.44■□□□□ 0.22
DDR1-237ENST00000437124 ZNF461Q8TAF7 563 aa16.44■□□□□ 0.22
DDR1-237ENST00000437124 C18orf25Q96B23 403 aaPredicted RBP16.44■□□□□ 0.22
DDR1-237ENST00000437124 ASB16Q96NS5 453 aa16.44■□□□□ 0.22
DDR1-237ENST00000437124 PIAS3Q9Y6X2 628 aa16.44■□□□□ 0.22
DDR1-237ENST00000437124 NPHP3-ACAD11A0A0J9YXS1 232 aa16.43■□□□□ 0.22
DDR1-237ENST00000437124 ZNF197O14709 1029 aa16.43■□□□□ 0.22
DDR1-237ENST00000437124 SLC26A4O43511 780 aa16.43■□□□□ 0.22
DDR1-237ENST00000437124 PSMC3P17980 439 aa16.43■□□□□ 0.22
DDR1-237ENST00000437124 RPL9P32969 192 aaKnown RBP16.43■□□□□ 0.22
DDR1-237ENST00000437124 SATB1Q01826 763 aa16.43■□□□□ 0.22
DDR1-237ENST00000437124 MCL1Q07820 350 aa16.43■□□□□ 0.22
DDR1-237ENST00000437124 GAS6Q14393 721 aa16.43■□□□□ 0.22
DDR1-237ENST00000437124 GRM2Q14416 872 aa16.43■□□□□ 0.22
DDR1-237ENST00000437124 NOLC1Q14978 699 aaKnown RBP eCLIP16.43■□□□□ 0.22
DDR1-237ENST00000437124 SLC10A6Q3KNW5 377 aa16.43■□□□□ 0.22
DDR1-237ENST00000437124 C1orf228Q6PIY5 440 aa16.43■□□□□ 0.22
DDR1-237ENST00000437124 ARHGAP30Q7Z6I6 1101 aaPredicted RBP16.43■□□□□ 0.22
DDR1-237ENST00000437124 LONP2Q86WA8 852 aa16.43■□□□□ 0.22
DDR1-237ENST00000437124 DEPDC1BQ8WUY9 529 aa16.43■□□□□ 0.22
DDR1-237ENST00000437124 CDK5RAP3Q96JB5 506 aa16.43■□□□□ 0.22
DDR1-237ENST00000437124 AK8Q96MA6 479 aa16.43■□□□□ 0.22
DDR1-237ENST00000437124 UPF2Q9HAU5 1272 aaKnown RBP16.43■□□□□ 0.22
DDR1-237ENST00000437124 ANKFY1Q9P2R3 1169 aa16.43■□□□□ 0.22
DDR1-237ENST00000437124 SMC3Q9UQE7 1217 aa16.43■□□□□ 0.22
DDR1-237ENST00000437124 ANKRD11Q6UB99 2663 aaPredicted RBP16.43■□□□□ 0.22
DDR1-237ENST00000437124 CITO14578 2027 aa16.42■□□□□ 0.22
DDR1-237ENST00000437124 TM4SF5O14894 197 aa16.42■□□□□ 0.22
DDR1-237ENST00000437124 SYN3O14994 580 aa16.42■□□□□ 0.22
DDR1-237ENST00000437124 ABLIM3O94929 683 aa16.42■□□□□ 0.22
DDR1-237ENST00000437124 LRG1P02750 347 aa16.42■□□□□ 0.22
DDR1-237ENST00000437124 HOXA6P31267 233 aa16.42■□□□□ 0.22
DDR1-237ENST00000437124 NCKAP1LP55160 1127 aa16.42■□□□□ 0.22
DDR1-237ENST00000437124 ROR1Q01973 937 aa16.42■□□□□ 0.22
DDR1-237ENST00000437124 CACNB1Q02641 598 aaPredicted RBP16.42■□□□□ 0.22
DDR1-237ENST00000437124 MRPL58Q14197 206 aaKnown RBP16.42■□□□□ 0.22
DDR1-237ENST00000437124 SEZ6Q53EL9 994 aa16.42■□□□□ 0.22
DDR1-237ENST00000437124 N4BP2L1Q5TBK1 243 aaPredicted RBP16.42■□□□□ 0.22
DDR1-237ENST00000437124 LARP1BQ659C4 914 aaKnown RBP16.42■□□□□ 0.22
DDR1-237ENST00000437124 IL31Q6EBC2 164 aa16.42■□□□□ 0.22
DDR1-237ENST00000437124 SMARCD2Q92925 531 aa16.42■□□□□ 0.22
DDR1-237ENST00000437124 KCNN1Q92952 543 aa16.42■□□□□ 0.22
DDR1-237ENST00000437124 MSANTD3Q96H12 275 aa16.42■□□□□ 0.22
DDR1-237ENST00000437124 HAPLN2Q9GZV7 340 aa16.42■□□□□ 0.22
DDR1-237ENST00000437124 TRPV4Q9HBA0 871 aa16.42■□□□□ 0.22
DDR1-237ENST00000437124 LARSQ9P2J5 1176 aaKnown RBP16.42■□□□□ 0.22
DDR1-237ENST00000437124 ASPMQ8IZT6 3477 aa16.42■□□□□ 0.22
DDR1-237ENST00000437124 MYH11P35749 1972 aa16.42■□□□□ 0.22
DDR1-237ENST00000437124 WDR27A2RRH5 827 aa16.41■□□□□ 0.22
DDR1-237ENST00000437124 CHURC1-FNTBB4DL54 471 aa16.41■□□□□ 0.22
DDR1-237ENST00000437124 K7ESF4 209 aa16.41■□□□□ 0.22
DDR1-237ENST00000437124 ARNTLO00327 626 aa16.41■□□□□ 0.22
DDR1-237ENST00000437124 CLDN3O15551 220 aa16.41■□□□□ 0.22
DDR1-237ENST00000437124 GDI1P31150 447 aa16.41■□□□□ 0.22
DDR1-237ENST00000437124 FNTBP49356 437 aa16.41■□□□□ 0.22
DDR1-237ENST00000437124 VITQ6UXI7 678 aa16.41■□□□□ 0.22
DDR1-237ENST00000437124 TCEAL8Q8IYN2 117 aa16.41■□□□□ 0.22
DDR1-237ENST00000437124 LRRC15Q8TF66 581 aa16.41■□□□□ 0.22
DDR1-237ENST00000437124 SUSD3Q96L08 255 aa16.41■□□□□ 0.22
DDR1-237ENST00000437124 CORO1BQ9BR76 489 aa16.41■□□□□ 0.22
DDR1-237ENST00000437124 ODF2LQ9ULJ1 636 aa16.41■□□□□ 0.22
DDR1-237ENST00000437124 ZSCAN21Q9Y5A6 473 aaPredicted RBP16.41■□□□□ 0.22
DDR1-237ENST00000437124 NUB1Q9Y5A7 615 aa16.41■□□□□ 0.22
DDR1-237ENST00000437124 ZFYVE26Q68DK2 2539 aa16.4■□□□□ 0.22
Retrieved 100 of 20,778 RNA–protein pairs in 19.5 ms