RNA–Protein interactions for RNA: ENST00000436439.6

HMGCL-204, Transcript of 3-hydroxy-3-methylglutaryl-CoA lyase, humanhuman

TSL 2 BASIC

Gene HMGCL, Length 1,354 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGCL-204ENST00000436439 PLCD3Q8N3E9 789 aa11.88□□□□□ -0.51
HMGCL-204ENST00000436439 TMEM105Q8N8V8 129 aa11.88□□□□□ -0.51
HMGCL-204ENST00000436439 ANKRD20A12PQ8NF67 263 aa11.88□□□□□ -0.51
HMGCL-204ENST00000436439 PRRX2Q99811 253 aa11.88□□□□□ -0.51
HMGCL-204ENST00000436439 PAAF1Q9BRP4 392 aa11.88□□□□□ -0.51
HMGCL-204ENST00000436439 GPR62Q9BZJ7 368 aa11.88□□□□□ -0.51
HMGCL-204ENST00000436439 TRIM6Q9C030 488 aaPredicted RBP11.88□□□□□ -0.51
HMGCL-204ENST00000436439 CXCL16Q9H2A7 254 aa11.88□□□□□ -0.51
HMGCL-204ENST00000436439 STK39Q9UEW8 545 aa11.88□□□□□ -0.51
HMGCL-204ENST00000436439 TBX20Q9UMR3 447 aa11.88□□□□□ -0.51
HMGCL-204ENST00000436439 USP20Q9Y2K6 914 aa11.88□□□□□ -0.51
HMGCL-204ENST00000436439 ZDBF2Q9HCK1 2354 aa11.88□□□□□ -0.51
HMGCL-204ENST00000436439 A0A1B0GTH6 734 aa11.87□□□□□ -0.51
HMGCL-204ENST00000436439 CCDC195A0A1B0GUA6 201 aa11.87□□□□□ -0.51
HMGCL-204ENST00000436439 A0A1B0GUA9 196 aa11.87□□□□□ -0.51
HMGCL-204ENST00000436439 KCNJ18B7U540 433 aa11.87□□□□□ -0.51
HMGCL-204ENST00000436439 CBFA2T2O43439 604 aa11.87□□□□□ -0.51
HMGCL-204ENST00000436439 RFPL2O75678 378 aa11.87□□□□□ -0.51
HMGCL-204ENST00000436439 GNA14O95837 355 aa11.87□□□□□ -0.51
HMGCL-204ENST00000436439 SERPINC1P01008 464 aa11.87□□□□□ -0.51
HMGCL-204ENST00000436439 PIGRP01833 764 aa11.87□□□□□ -0.51
HMGCL-204ENST00000436439 SPATA31D3P0C874 917 aa11.87□□□□□ -0.51
HMGCL-204ENST00000436439 DSG1Q02413 1049 aa11.87□□□□□ -0.51
HMGCL-204ENST00000436439 NCBP1Q09161 790 aaKnown RBP11.87□□□□□ -0.51
HMGCL-204ENST00000436439 KCNJ12Q14500 433 aa11.87□□□□□ -0.51
HMGCL-204ENST00000436439 FUT10Q6P4F1 479 aa11.87□□□□□ -0.51
HMGCL-204ENST00000436439 C15orf39Q6ZRI6 1047 aa11.87□□□□□ -0.51
HMGCL-204ENST00000436439 SPATA31D4Q6ZUB0 917 aa11.87□□□□□ -0.51
HMGCL-204ENST00000436439 CCDC149Q6ZUS6 474 aa11.87□□□□□ -0.51
HMGCL-204ENST00000436439 HS2ST1Q7LGA3 356 aa11.87□□□□□ -0.51
HMGCL-204ENST00000436439 GLYCTKQ8IVS8 523 aa11.87□□□□□ -0.51
HMGCL-204ENST00000436439 SPC24Q8NBT2 197 aa11.87□□□□□ -0.51
HMGCL-204ENST00000436439 DEPTORQ8TB45 409 aa11.87□□□□□ -0.51
HMGCL-204ENST00000436439 C2orf40Q9H1Z8 148 aa11.87□□□□□ -0.51
HMGCL-204ENST00000436439 RXFP1Q9HBX9 757 aa11.87□□□□□ -0.51
HMGCL-204ENST00000436439 CHST7Q9NS84 486 aa11.87□□□□□ -0.51
HMGCL-204ENST00000436439 DMAC2Q9NW81 257 aa11.87□□□□□ -0.51
HMGCL-204ENST00000436439 MAGEC2Q9UBF1 373 aaPredicted RBP11.87□□□□□ -0.51
HMGCL-204ENST00000436439 PARP2Q9UGN5 583 aa11.87□□□□□ -0.51
HMGCL-204ENST00000436439 H0Y858 1186 aa11.86□□□□□ -0.51
HMGCL-204ENST00000436439 CETN3O15182 167 aa11.86□□□□□ -0.51
HMGCL-204ENST00000436439 SLC16A3O15427 465 aaKnown RBP11.86□□□□□ -0.51
HMGCL-204ENST00000436439 NR3C1P04150 777 aa11.86□□□□□ -0.51
HMGCL-204ENST00000436439 ADH1AP07327 375 aa11.86□□□□□ -0.51
HMGCL-204ENST00000436439 NR2F2P24468 414 aa11.86□□□□□ -0.51
HMGCL-204ENST00000436439 UBASH3AP57075 661 aa11.86□□□□□ -0.51
HMGCL-204ENST00000436439 GRIK3Q13003 919 aa11.86□□□□□ -0.51
HMGCL-204ENST00000436439 ADAM9Q13443 819 aa11.86□□□□□ -0.51
HMGCL-204ENST00000436439 TAS1R3Q7RTX0 852 aa11.86□□□□□ -0.51
HMGCL-204ENST00000436439 PALB2Q86YC2 1186 aa11.86□□□□□ -0.51
HMGCL-204ENST00000436439 SYCP3Q8IZU3 236 aa11.86□□□□□ -0.51
HMGCL-204ENST00000436439 ACSF2Q96CM8 615 aaPredicted RBP11.86□□□□□ -0.51
HMGCL-204ENST00000436439 CNOT6LQ96LI5 555 aaKnown RBP11.86□□□□□ -0.51
HMGCL-204ENST00000436439 MKNK1Q9BUB5 465 aa11.86□□□□□ -0.51
HMGCL-204ENST00000436439 CCDC113Q9H0I3 377 aa11.86□□□□□ -0.51
HMGCL-204ENST00000436439 FZD8Q9H461 694 aa11.86□□□□□ -0.51
HMGCL-204ENST00000436439 AGPAT3Q9NRZ7 376 aa11.86□□□□□ -0.51
HMGCL-204ENST00000436439 PRMT7Q9NVM4 692 aaPredicted RBP11.86□□□□□ -0.51
HMGCL-204ENST00000436439 IFNKQ9P0W0 207 aa11.86□□□□□ -0.51
HMGCL-204ENST00000436439 ADAM28Q9UKQ2 775 aa11.86□□□□□ -0.51
HMGCL-204ENST00000436439 MYO15AQ9UKN7 3530 aa11.86□□□□□ -0.51
HMGCL-204ENST00000436439 K7ERI5 159 aa11.85□□□□□ -0.51
HMGCL-204ENST00000436439 PTGESO14684 152 aa11.85□□□□□ -0.51
HMGCL-204ENST00000436439 MAPK13O15264 365 aa11.85□□□□□ -0.51
HMGCL-204ENST00000436439 GLUD1P00367 558 aa11.85□□□□□ -0.51
HMGCL-204ENST00000436439 PRKCSHP14314 528 aaPredicted RBP11.85□□□□□ -0.51
HMGCL-204ENST00000436439 RPL17P18621 184 aaKnown RBP11.85□□□□□ -0.51
HMGCL-204ENST00000436439 MCCD1P59942 119 aaPredicted RBP11.85□□□□□ -0.51
HMGCL-204ENST00000436439 STRN3Q13033 797 aa11.85□□□□□ -0.51
HMGCL-204ENST00000436439 NR1I3Q14994 352 aa11.85□□□□□ -0.51
HMGCL-204ENST00000436439 KRT31Q15323 416 aa11.85□□□□□ -0.51
HMGCL-204ENST00000436439 FAM187BQ17R55 369 aa11.85□□□□□ -0.51
HMGCL-204ENST00000436439 FILIP1LQ4L180 1135 aa11.85□□□□□ -0.51
HMGCL-204ENST00000436439 CWF19L1Q69YN2 538 aaKnown RBP11.85□□□□□ -0.51
HMGCL-204ENST00000436439 OTOP3Q7RTS5 596 aa11.85□□□□□ -0.51
HMGCL-204ENST00000436439 FRMD5Q7Z6J6 570 aa11.85□□□□□ -0.51
HMGCL-204ENST00000436439 CMASQ8NFW8 434 aaPredicted RBP11.85□□□□□ -0.51
HMGCL-204ENST00000436439 HASPINQ8TF76 798 aa11.85□□□□□ -0.51
HMGCL-204ENST00000436439 RSAD2Q8WXG1 361 aa11.85□□□□□ -0.51
HMGCL-204ENST00000436439 ZNF707Q96C28 371 aaPredicted RBP11.85□□□□□ -0.51
HMGCL-204ENST00000436439 KIFC3Q9BVG8 833 aa11.85□□□□□ -0.51
HMGCL-204ENST00000436439 COLEC11Q9BWP8 271 aa11.85□□□□□ -0.51
HMGCL-204ENST00000436439 XPO4Q9C0E2 1151 aaKnown RBP11.85□□□□□ -0.51
HMGCL-204ENST00000436439 PDZD7Q9H5P4 517 aa11.85□□□□□ -0.51
HMGCL-204ENST00000436439 KCNK12Q9HB15 430 aa11.85□□□□□ -0.51
HMGCL-204ENST00000436439 SNTG2Q9NY99 539 aa11.85□□□□□ -0.51
HMGCL-204ENST00000436439 IMPACTQ9P2X3 320 aa11.85□□□□□ -0.51
HMGCL-204ENST00000436439 SSX2IPQ9Y2D8 614 aa11.85□□□□□ -0.51
HMGCL-204ENST00000436439 STYXL1Q9Y6J8 313 aa11.85□□□□□ -0.51
HMGCL-204ENST00000436439 CASTOR2A6NHX0 329 aa11.84□□□□□ -0.51
HMGCL-204ENST00000436439 KIAA0391O15091 583 aaKnown RBP11.84□□□□□ -0.51
HMGCL-204ENST00000436439 TGM5O43548 720 aa11.84□□□□□ -0.51
HMGCL-204ENST00000436439 GALR2O43603 387 aaPredicted RBP11.84□□□□□ -0.51
HMGCL-204ENST00000436439 NARSO43776 548 aaKnown RBP11.84□□□□□ -0.51
HMGCL-204ENST00000436439 NPR3P17342 541 aa11.84□□□□□ -0.51
HMGCL-204ENST00000436439 GARTP22102 1010 aa11.84□□□□□ -0.51
HMGCL-204ENST00000436439 COPB1P53618 953 aaKnown RBP11.84□□□□□ -0.51
HMGCL-204ENST00000436439 GSDMDP57764 484 aa11.84□□□□□ -0.51
HMGCL-204ENST00000436439 TDGQ13569 410 aa11.84□□□□□ -0.51
HMGCL-204ENST00000436439 NAB2Q15742 525 aa11.84□□□□□ -0.51
Retrieved 100 of 20,778 RNA–protein pairs in 47 ms