RNA–Protein interactions for RNA: ENST00000433888.5

PTPN4-205, Transcript of protein tyrosine phosphatase, non-receptor type 4, humanhuman

TSL 3

Gene PTPN4, Length 954 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPN4-205ENST00000433888 IFI44Q8TCB0 444 aa5.18□□□□□ -1.58
PTPN4-205ENST00000433888 TMEM125Q96AQ2 219 aa5.18□□□□□ -1.58
PTPN4-205ENST00000433888 FBXL20Q96IG2 436 aa5.18□□□□□ -1.58
PTPN4-205ENST00000433888 KLHL32Q96NJ5 620 aa5.18□□□□□ -1.58
PTPN4-205ENST00000433888 FAM126AQ9BYI3 521 aaPredicted RBP5.18□□□□□ -1.58
PTPN4-205ENST00000433888 SLKQ9H2G2 1235 aaPredicted RBP5.18□□□□□ -1.58
PTPN4-205ENST00000433888 RNF7Q9UBF6 113 aa5.18□□□□□ -1.58
PTPN4-205ENST00000433888 SLC43A1O75387 559 aa5.17□□□□□ -1.58
PTPN4-205ENST00000433888 MTHFD1P11586 935 aaKnown RBP5.17□□□□□ -1.58
PTPN4-205ENST00000433888 CPEP16870 476 aa5.17□□□□□ -1.58
PTPN4-205ENST00000433888 SOX10P56693 466 aa5.17□□□□□ -1.58
PTPN4-205ENST00000433888 FPGSQ05932 587 aa5.17□□□□□ -1.58
PTPN4-205ENST00000433888 KLF1Q13351 362 aaPredicted RBP5.17□□□□□ -1.58
PTPN4-205ENST00000433888 CD300EQ496F6 205 aaPredicted RBP5.17□□□□□ -1.58
PTPN4-205ENST00000433888 CT47A1Q5JQC4 288 aaPredicted RBP5.17□□□□□ -1.58
PTPN4-205ENST00000433888 PPM1NQ8N819 430 aa5.17□□□□□ -1.58
PTPN4-205ENST00000433888 SSH1Q8WYL5 1049 aa5.17□□□□□ -1.58
PTPN4-205ENST00000433888 RAB24Q969Q5 203 aa5.17□□□□□ -1.58
PTPN4-205ENST00000433888 PGBD1Q96JS3 809 aa5.17□□□□□ -1.58
PTPN4-205ENST00000433888 ZNF778Q96MU6 729 aa5.17□□□□□ -1.58
PTPN4-205ENST00000433888 CPNE5Q9HCH3 593 aa5.17□□□□□ -1.58
PTPN4-205ENST00000433888 TUBD1Q9UJT1 453 aa5.17□□□□□ -1.58
PTPN4-205ENST00000433888 ADAM21Q9UKJ8 722 aa5.17□□□□□ -1.58
PTPN4-205ENST00000433888 NEU2Q9Y3R4 380 aa5.17□□□□□ -1.58
PTPN4-205ENST00000433888 VWC2LB2RUY7 222 aa5.16□□□□□ -1.58
PTPN4-205ENST00000433888 ITGB6P18564 788 aa5.16□□□□□ -1.58
PTPN4-205ENST00000433888 GPD1P21695 349 aa5.16□□□□□ -1.58
PTPN4-205ENST00000433888 CDC42EP1Q00587 391 aa5.16□□□□□ -1.58
PTPN4-205ENST00000433888 ATP2B3Q16720 1220 aa5.16□□□□□ -1.58
PTPN4-205ENST00000433888 TXNRD1Q16881 649 aa5.16□□□□□ -1.58
PTPN4-205ENST00000433888 EPHA10Q5JZY3 1008 aa5.16□□□□□ -1.58
PTPN4-205ENST00000433888 SDE2Q6IQ49 451 aa5.16□□□□□ -1.58
PTPN4-205ENST00000433888 GIMAP6Q6P9H5 292 aa5.16□□□□□ -1.58
PTPN4-205ENST00000433888 PTF1AQ7RTS3 328 aa5.16□□□□□ -1.58
PTPN4-205ENST00000433888 ADGRG5Q8IZF4 528 aa5.16□□□□□ -1.58
PTPN4-205ENST00000433888 MYCBPAPQ8TBZ2 947 aa5.16□□□□□ -1.58
PTPN4-205ENST00000433888 SMG7Q92540 1137 aaKnown RBP5.16□□□□□ -1.58
PTPN4-205ENST00000433888 DMRTA2Q96SC8 542 aa5.16□□□□□ -1.58
PTPN4-205ENST00000433888 JKAMPQ9P055 326 aa5.16□□□□□ -1.58
PTPN4-205ENST00000433888 SLC45A2Q9UMX9 530 aa5.16□□□□□ -1.58
PTPN4-205ENST00000433888 PCDHA13Q9Y5I0 950 aa5.16□□□□□ -1.58
PTPN4-205ENST00000433888 WASHC2AQ641Q2 1341 aa5.16□□□□□ -1.58
PTPN4-205ENST00000433888 CELA2AP08217 269 aa5.15□□□□□ -1.59
PTPN4-205ENST00000433888 ANXA11P50995 505 aaKnown RBP5.15□□□□□ -1.59
PTPN4-205ENST00000433888 ZNF81P51508 661 aa5.15□□□□□ -1.59
PTPN4-205ENST00000433888 ZNF280AP59817 542 aaPredicted RBP5.15□□□□□ -1.59
PTPN4-205ENST00000433888 MC2RQ01718 297 aa5.15□□□□□ -1.59
PTPN4-205ENST00000433888 ZNF844Q08AG5 666 aa5.15□□□□□ -1.59
PTPN4-205ENST00000433888 HLXQ14774 488 aaPredicted RBP5.15□□□□□ -1.59
PTPN4-205ENST00000433888 CFAP52Q8N1V2 620 aa5.15□□□□□ -1.59
PTPN4-205ENST00000433888 CBARPQ8N350 705 aaPredicted RBP5.15□□□□□ -1.59
PTPN4-205ENST00000433888 NSUN7Q8NE18 718 aaKnown RBP5.15□□□□□ -1.59
PTPN4-205ENST00000433888 ABCF1Q8NE71 845 aaKnown RBP eCLIP5.15□□□□□ -1.59
PTPN4-205ENST00000433888 TMIEQ8NEW7 156 aa5.15□□□□□ -1.59
PTPN4-205ENST00000433888 HASPINQ8TF76 798 aa5.15□□□□□ -1.59
PTPN4-205ENST00000433888 JADE3Q92613 823 aa5.15□□□□□ -1.59
PTPN4-205ENST00000433888 TMX3Q96JJ7 454 aa5.15□□□□□ -1.59
PTPN4-205ENST00000433888 MRGPRX4Q96LA9 322 aa5.15□□□□□ -1.59
PTPN4-205ENST00000433888 SLC29A3Q9BZD2 475 aa5.15□□□□□ -1.59
PTPN4-205ENST00000433888 CDYLQ9Y232 598 aa5.15□□□□□ -1.59
PTPN4-205ENST00000433888 IPPQ9Y573 584 aa5.15□□□□□ -1.59
PTPN4-205ENST00000433888 LINC00473A8K010 186 aa5.14□□□□□ -1.59
PTPN4-205ENST00000433888 E7ENX8 843 aa5.14□□□□□ -1.59
PTPN4-205ENST00000433888 PPP3CBP16298 524 aa5.14□□□□□ -1.59
PTPN4-205ENST00000433888 EDNRBP24530 442 aa5.14□□□□□ -1.59
PTPN4-205ENST00000433888 KRTAP10-9P60411 292 aa5.14□□□□□ -1.59
PTPN4-205ENST00000433888 POU6F2P78424 691 aaPredicted RBP5.14□□□□□ -1.59
PTPN4-205ENST00000433888 TAP2Q03519 686 aa5.14□□□□□ -1.59
PTPN4-205ENST00000433888 TSTD2Q5T7W7 516 aa5.14□□□□□ -1.59
PTPN4-205ENST00000433888 ZNF425Q6IV72 752 aa5.14□□□□□ -1.59
PTPN4-205ENST00000433888 TOR1AIP2Q8NFQ8 470 aa5.14□□□□□ -1.59
PTPN4-205ENST00000433888 DDB2Q92466 427 aa5.14□□□□□ -1.59
PTPN4-205ENST00000433888 TDP1Q9NUW8 608 aa5.14□□□□□ -1.59
PTPN4-205ENST00000433888 ZNF70Q9UC06 446 aaPredicted RBP5.14□□□□□ -1.59
PTPN4-205ENST00000433888 CCDC195A0A1B0GUA6 201 aa5.13□□□□□ -1.59
PTPN4-205ENST00000433888 MANSC4A6NHS7 340 aaPredicted RBP5.13□□□□□ -1.59
PTPN4-205ENST00000433888 SGTAO43765 313 aa5.13□□□□□ -1.59
PTPN4-205ENST00000433888 ORC4O43929 436 aa5.13□□□□□ -1.59
PTPN4-205ENST00000433888 NDUFS2O75306 463 aa5.13□□□□□ -1.59
PTPN4-205ENST00000433888 PRKCGP05129 697 aa5.13□□□□□ -1.59
PTPN4-205ENST00000433888 CHRM2P08172 466 aa5.13□□□□□ -1.59
PTPN4-205ENST00000433888 C5AR1P21730 350 aa5.13□□□□□ -1.59
PTPN4-205ENST00000433888 SSBP2P81877 361 aaPredicted RBP5.13□□□□□ -1.59
PTPN4-205ENST00000433888 TFF2Q03403 129 aa5.13□□□□□ -1.59
PTPN4-205ENST00000433888 ZNF365Q70YC5 407 aa5.13□□□□□ -1.59
PTPN4-205ENST00000433888 RSPH3Q86UC2 560 aa5.13□□□□□ -1.59
PTPN4-205ENST00000433888 Q8N9P0 234 aaPredicted RBP5.13□□□□□ -1.59
PTPN4-205ENST00000433888 POC1BQ8TC44 478 aa5.13□□□□□ -1.59
PTPN4-205ENST00000433888 LIMCH1Q9UPQ0 1083 aa5.13□□□□□ -1.59
PTPN4-205ENST00000433888 WDR91A4D1P6 747 aa5.12□□□□□ -1.59
PTPN4-205ENST00000433888 E9PLN8 166 aa5.12□□□□□ -1.59
PTPN4-205ENST00000433888 HTRA2O43464 458 aaPredicted RBP5.12□□□□□ -1.59
PTPN4-205ENST00000433888 LPOP22079 712 aaPredicted RBP5.12□□□□□ -1.59
PTPN4-205ENST00000433888 NXPH1P58417 271 aa5.12□□□□□ -1.59
PTPN4-205ENST00000433888 TLE1Q04724 770 aa5.12□□□□□ -1.59
PTPN4-205ENST00000433888 IL10RAQ13651 578 aa5.12□□□□□ -1.59
PTPN4-205ENST00000433888 KIAA1614Q5VZ46 1190 aa5.12□□□□□ -1.59
PTPN4-205ENST00000433888 FCRLBQ6BAA4 426 aa5.12□□□□□ -1.59
PTPN4-205ENST00000433888 AMOTL1Q8IY63 956 aa5.12□□□□□ -1.59
PTPN4-205ENST00000433888 PDPRQ8NCN5 879 aa5.12□□□□□ -1.59
Retrieved 100 of 20,778 RNA–protein pairs in 21.5 ms