RNA–Protein interactions for RNA: ENST00000433454.3

NEFM-202, Transcript of neurofilament medium, humanhuman

TSL 2 BASIC

Gene NEFM, Length 2,519 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NEFM-202ENST00000433454 CTNNBL1Q8WYA6 563 aaPredicted RBP11.32□□□□□ -0.6
NEFM-202ENST00000433454 BCO2Q9BYV7 579 aa11.32□□□□□ -0.6
NEFM-202ENST00000433454 RNF208Q9H0X6 261 aa11.32□□□□□ -0.6
NEFM-202ENST00000433454 CXCL16Q9H2A7 254 aa11.32□□□□□ -0.6
NEFM-202ENST00000433454 RNF39Q9H2S5 420 aa11.32□□□□□ -0.6
NEFM-202ENST00000433454 SALL4Q9UJQ4 1053 aa11.32□□□□□ -0.6
NEFM-202ENST00000433454 SQORQ9Y6N5 450 aa11.32□□□□□ -0.6
NEFM-202ENST00000433454 WEE2P0C1S8 567 aa11.31□□□□□ -0.6
NEFM-202ENST00000433454 TMEM253P0C7T8 217 aa11.31□□□□□ -0.6
NEFM-202ENST00000433454 CKBP12277 381 aa11.31□□□□□ -0.6
NEFM-202ENST00000433454 CCL5P13501 91 aa11.31□□□□□ -0.6
NEFM-202ENST00000433454 KCNE1P15382 129 aa11.31□□□□□ -0.6
NEFM-202ENST00000433454 GALCP54803 685 aa11.31□□□□□ -0.6
NEFM-202ENST00000433454 IFI16Q16666 785 aaKnown RBP11.31□□□□□ -0.6
NEFM-202ENST00000433454 XKR4Q5GH76 650 aa11.31□□□□□ -0.6
NEFM-202ENST00000433454 L2HGDHQ9H9P8 463 aa11.31□□□□□ -0.6
NEFM-202ENST00000433454 TAS2R14Q9NYV8 317 aa11.31□□□□□ -0.6
NEFM-202ENST00000433454 KLK14Q9P0G3 267 aa11.31□□□□□ -0.6
NEFM-202ENST00000433454 TUBGCP4Q9UGJ1 667 aa11.31□□□□□ -0.6
NEFM-202ENST00000433454 POLIQ9UNA4 740 aa11.31□□□□□ -0.6
NEFM-202ENST00000433454 A0A0A6YYK5 440 aaPredicted RBP11.31□□□□□ -0.6
NEFM-202ENST00000433454 SMIM28A0A1B0GU29 152 aa11.31□□□□□ -0.6
NEFM-202ENST00000433454 ANO9A1A5B4 782 aa11.31□□□□□ -0.6
NEFM-202ENST00000433454 ANKRD62A6NC57 917 aa11.31□□□□□ -0.6
NEFM-202ENST00000433454 TLR3O15455 904 aaKnown RBP11.31□□□□□ -0.6
NEFM-202ENST00000433454 BUB1O43683 1085 aa11.31□□□□□ -0.6
NEFM-202ENST00000433454 RTN2O75298 545 aa11.31□□□□□ -0.6
NEFM-202ENST00000433454 CD4P01730 458 aa11.31□□□□□ -0.6
NEFM-202ENST00000433454 RAB27AP51159 221 aa11.31□□□□□ -0.6
NEFM-202ENST00000433454 TERF1P54274 439 aa11.31□□□□□ -0.6
NEFM-202ENST00000433454 TNNC1P63316 161 aa11.31□□□□□ -0.6
NEFM-202ENST00000433454 DNAAF5Q86Y56 855 aa11.31□□□□□ -0.6
NEFM-202ENST00000433454 TMEM130Q8N3G9 435 aa11.31□□□□□ -0.6
NEFM-202ENST00000433454 PCDHB18PQ96TA0 734 aa11.31□□□□□ -0.6
NEFM-202ENST00000433454 ISCUQ9H1K1 167 aa11.31□□□□□ -0.6
NEFM-202ENST00000433454 CYP3A43Q9HB55 503 aa11.31□□□□□ -0.6
NEFM-202ENST00000433454 OGDHLQ9ULD0 1010 aa11.31□□□□□ -0.6
NEFM-202ENST00000433454 NCANO14594 1321 aa11.3□□□□□ -0.6
NEFM-202ENST00000433454 FTLP02792 175 aaPredicted RBP11.3□□□□□ -0.6
NEFM-202ENST00000433454 ITGA4P13612 1032 aa11.3□□□□□ -0.6
NEFM-202ENST00000433454 ABCB4P21439 1286 aa11.3□□□□□ -0.6
NEFM-202ENST00000433454 LRRC52Q8N7C0 313 aa11.3□□□□□ -0.6
NEFM-202ENST00000433454 CAGE1Q8TC20 777 aa11.3□□□□□ -0.6
NEFM-202ENST00000433454 C18orf25Q96B23 403 aaPredicted RBP11.3□□□□□ -0.6
NEFM-202ENST00000433454 TRAIPQ9BWF2 469 aa11.3□□□□□ -0.6
NEFM-202ENST00000433454 PDCL3Q9H2J4 239 aa11.3□□□□□ -0.6
NEFM-202ENST00000433454 FAM124BQ9H5Z6 455 aaPredicted RBP11.3□□□□□ -0.6
NEFM-202ENST00000433454 MYH10P35580 1976 aa11.3□□□□□ -0.6
NEFM-202ENST00000433454 THAP12O43422 761 aa11.3□□□□□ -0.6
NEFM-202ENST00000433454 ATF7P17544 494 aaPredicted RBP11.3□□□□□ -0.6
NEFM-202ENST00000433454 RAP1GAPP47736 663 aa11.3□□□□□ -0.6
NEFM-202ENST00000433454 C1QTNF8P60827 252 aa11.3□□□□□ -0.6
NEFM-202ENST00000433454 CLEC16AQ2KHT3 1053 aa11.3□□□□□ -0.6
NEFM-202ENST00000433454 TRIM72Q6ZMU5 477 aa11.3□□□□□ -0.6
NEFM-202ENST00000433454 MYRIPQ8NFW9 859 aa11.3□□□□□ -0.6
NEFM-202ENST00000433454 RFFLQ8WZ73 363 aa11.3□□□□□ -0.6
NEFM-202ENST00000433454 OSBPL7Q9BZF2 842 aa11.3□□□□□ -0.6
NEFM-202ENST00000433454 SMYD3Q9H7B4 428 aa11.3□□□□□ -0.6
NEFM-202ENST00000433454 PUF60Q9UHX1 559 aaKnown RBP11.3□□□□□ -0.6
NEFM-202ENST00000433454 JRKLQ9Y4A0 524 aa11.3□□□□□ -0.6
NEFM-202ENST00000433454 PCDHGC5Q9Y5F6 944 aa11.3□□□□□ -0.6
NEFM-202ENST00000433454 ENC1O14682 589 aa11.29□□□□□ -0.6
NEFM-202ENST00000433454 CALCAP01258 141 aa11.29□□□□□ -0.6
NEFM-202ENST00000433454 CYP3A5P20815 502 aa11.29□□□□□ -0.6
NEFM-202ENST00000433454 NOP2P46087 812 aaKnown RBP11.29□□□□□ -0.6
NEFM-202ENST00000433454 CDK7P50613 346 aa11.29□□□□□ -0.6
NEFM-202ENST00000433454 TUBB2AQ13885 445 aa11.29□□□□□ -0.6
NEFM-202ENST00000433454 ZNF394Q53GI3 561 aa11.29□□□□□ -0.6
NEFM-202ENST00000433454 C9orf57Q5W0N0 161 aa11.29□□□□□ -0.6
NEFM-202ENST00000433454 TTC39CQ8N584 583 aa11.29□□□□□ -0.6
NEFM-202ENST00000433454 ZNF560Q96MR9 790 aa11.29□□□□□ -0.6
NEFM-202ENST00000433454 RPS6KC1Q96S38 1066 aa11.29□□□□□ -0.6
NEFM-202ENST00000433454 TUBB2BQ9BVA1 445 aa11.29□□□□□ -0.6
NEFM-202ENST00000433454 THAP2Q9H0W7 228 aa11.29□□□□□ -0.6
NEFM-202ENST00000433454 MRFAP1Q9Y605 127 aa11.29□□□□□ -0.6
NEFM-202ENST00000433454 SCN1AP35498 2009 aa11.29□□□□□ -0.6
NEFM-202ENST00000433454 ATP1A1P05023 1023 aaKnown RBP11.29□□□□□ -0.6
NEFM-202ENST00000433454 DSC3Q14574 896 aa11.29□□□□□ -0.6
NEFM-202ENST00000433454 TRAF7Q6Q0C0 670 aa11.29□□□□□ -0.6
NEFM-202ENST00000433454 FAM126BQ8IXS8 530 aa11.29□□□□□ -0.6
NEFM-202ENST00000433454 ZFP42Q96MM3 310 aa11.29□□□□□ -0.6
NEFM-202ENST00000433454 MMS19Q96T76 1030 aa11.29□□□□□ -0.6
NEFM-202ENST00000433454 RNF19AQ9NV58 838 aa11.29□□□□□ -0.6
NEFM-202ENST00000433454 GIT1Q9Y2X7 761 aa11.29□□□□□ -0.6
NEFM-202ENST00000433454 GTF3C5Q9Y5Q8 519 aaPredicted RBP11.29□□□□□ -0.6
NEFM-202ENST00000433454 PTGESO14684 152 aa11.28□□□□□ -0.6
NEFM-202ENST00000433454 PPEF2O14830 753 aa11.28□□□□□ -0.6
NEFM-202ENST00000433454 MGEA5O60502 916 aa11.28□□□□□ -0.6
NEFM-202ENST00000433454 ZNF623O75123 536 aa11.28□□□□□ -0.6
NEFM-202ENST00000433454 PALMO75781 387 aa11.28□□□□□ -0.6
NEFM-202ENST00000433454 SKIP12755 728 aa11.28□□□□□ -0.6
NEFM-202ENST00000433454 MLH1P40692 756 aa11.28□□□□□ -0.6
NEFM-202ENST00000433454 PNPLA4P41247 253 aa11.28□□□□□ -0.6
NEFM-202ENST00000433454 CDH8P55286 799 aa11.28□□□□□ -0.6
NEFM-202ENST00000433454 GPC5P78333 572 aa11.28□□□□□ -0.6
NEFM-202ENST00000433454 ACAD10Q6JQN1 1059 aa11.28□□□□□ -0.6
NEFM-202ENST00000433454 PPP1R2P3Q6NXS1 205 aa11.28□□□□□ -0.6
NEFM-202ENST00000433454 MRPL10Q7Z7H8 261 aaKnown RBP11.28□□□□□ -0.6
NEFM-202ENST00000433454 RHOT2Q8IXI1 618 aa11.28□□□□□ -0.6
NEFM-202ENST00000433454 PPP1R10Q96QC0 940 aaKnown RBP11.28□□□□□ -0.6
Retrieved 100 of 20,778 RNA–protein pairs in 62.6 ms