RNA–Protein interactions for RNA: ENST00000430570.5

CPNE1-212, Transcript of copine 1, humanhuman

TSL 5

Gene CPNE1, Length 1,332 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPNE1-212ENST00000430570 CNPP09543 421 aaKnown RBP27.09■■□□□ 1.93
CPNE1-212ENST00000430570 DUSP6Q16828 381 aa27.09■■□□□ 1.93
CPNE1-212ENST00000430570 PIK3R5Q8WYR1 880 aa27.09■■□□□ 1.93
CPNE1-212ENST00000430570 RXFP1Q9HBX9 757 aa27.09■■□□□ 1.93
CPNE1-212ENST00000430570 DACH1Q9UI36 760 aa27.09■■□□□ 1.93
CPNE1-212ENST00000430570 SSX2IPQ9Y2D8 614 aa27.09■■□□□ 1.93
CPNE1-212ENST00000430570 SYN3O14994 580 aa27.08■■□□□ 1.93
CPNE1-212ENST00000430570 CLASP2O75122 1294 aaKnown RBP27.08■■□□□ 1.93
CPNE1-212ENST00000430570 RPL17P18621 184 aaKnown RBP27.08■■□□□ 1.93
CPNE1-212ENST00000430570 ERCC5P28715 1186 aaPredicted RBP27.08■■□□□ 1.93
CPNE1-212ENST00000430570 GCLMP48507 274 aa27.08■■□□□ 1.93
CPNE1-212ENST00000430570 AP3M2P53677 418 aa27.08■■□□□ 1.93
CPNE1-212ENST00000430570 ENPEPQ07075 957 aa27.08■■□□□ 1.93
CPNE1-212ENST00000430570 C15orf39Q6ZRI6 1047 aa27.08■■□□□ 1.93
CPNE1-212ENST00000430570 SV2AQ7L0J3 742 aa27.08■■□□□ 1.93
CPNE1-212ENST00000430570 LRRC52Q8N7C0 313 aa27.08■■□□□ 1.93
CPNE1-212ENST00000430570 ZNF560Q96MR9 790 aa27.08■■□□□ 1.93
CPNE1-212ENST00000430570 MMRN2Q9H8L6 949 aa27.08■■□□□ 1.93
CPNE1-212ENST00000430570 KPNA7A9QM74 516 aa27.07■■□□□ 1.92
CPNE1-212ENST00000430570 LINC01565O15544 149 aa27.07■■□□□ 1.92
CPNE1-212ENST00000430570 VNN1O95497 513 aa27.07■■□□□ 1.92
CPNE1-212ENST00000430570 PNPLA4P41247 253 aa27.07■■□□□ 1.92
CPNE1-212ENST00000430570 RBM10P98175 930 aaKnown RBP27.07■■□□□ 1.92
CPNE1-212ENST00000430570 BIRC3Q13489 604 aa27.07■■□□□ 1.92
CPNE1-212ENST00000430570 ZACNQ401N2 412 aa27.07■■□□□ 1.92
CPNE1-212ENST00000430570 SV2CQ496J9 727 aa27.07■■□□□ 1.92
CPNE1-212ENST00000430570 VARS2Q5ST30 1063 aaKnown RBP27.07■■□□□ 1.92
CPNE1-212ENST00000430570 C11orf57Q6ZUT1 292 aaPredicted RBP27.07■■□□□ 1.92
CPNE1-212ENST00000430570 FRMD5Q7Z6J6 570 aa27.07■■□□□ 1.92
CPNE1-212ENST00000430570 USP37Q86T82 979 aa27.07■■□□□ 1.92
CPNE1-212ENST00000430570 GPR65Q8IYL9 337 aa27.07■■□□□ 1.92
CPNE1-212ENST00000430570 HPDLQ96IR7 371 aa27.07■■□□□ 1.92
CPNE1-212ENST00000430570 ANO10Q9NW15 660 aa27.07■■□□□ 1.92
CPNE1-212ENST00000430570 ARMCX3Q9UH62 379 aaPredicted RBP27.07■■□□□ 1.92
CPNE1-212ENST00000430570 CYB561D2O14569 222 aa27.06■■□□□ 1.92
CPNE1-212ENST00000430570 TEX28O15482 410 aa27.06■■□□□ 1.92
CPNE1-212ENST00000430570 PHACTR2O75167 634 aa27.06■■□□□ 1.92
CPNE1-212ENST00000430570 MYL6P60660 151 aa27.06■■□□□ 1.92
CPNE1-212ENST00000430570 TYRO3Q06418 890 aa27.06■■□□□ 1.92
CPNE1-212ENST00000430570 MRPL58Q14197 206 aaKnown RBP27.06■■□□□ 1.92
CPNE1-212ENST00000430570 PSMD5Q16401 504 aa27.06■■□□□ 1.92
CPNE1-212ENST00000430570 STX1AQ16623 288 aa27.06■■□□□ 1.92
CPNE1-212ENST00000430570 SKOR2Q2VWA4 1001 aaPredicted RBP27.06■■□□□ 1.92
CPNE1-212ENST00000430570 CCDC40Q4G0X9 1142 aa27.06■■□□□ 1.92
CPNE1-212ENST00000430570 RSPO2Q6UXX9 243 aaPredicted RBP27.06■■□□□ 1.92
CPNE1-212ENST00000430570 PPP2R3CQ969Q6 453 aa27.06■■□□□ 1.92
CPNE1-212ENST00000430570 ELMO3Q96BJ8 720 aa27.06■■□□□ 1.92
CPNE1-212ENST00000430570 CLSTN3Q9BQT9 956 aa27.06■■□□□ 1.92
CPNE1-212ENST00000430570 EMILIN2Q9BXX0 1053 aa27.06■■□□□ 1.92
CPNE1-212ENST00000430570 ADAM12O43184 909 aa27.05■■□□□ 1.92
CPNE1-212ENST00000430570 PAX3P23760 479 aa27.05■■□□□ 1.92
CPNE1-212ENST00000430570 TRPC3Q13507 836 aa27.05■■□□□ 1.92
CPNE1-212ENST00000430570 SKIV2LQ15477 1246 aaKnown RBP27.05■■□□□ 1.92
CPNE1-212ENST00000430570 DCAF17Q5H9S7 520 aaPredicted RBP27.05■■□□□ 1.92
CPNE1-212ENST00000430570 CT47A1Q5JQC4 288 aaPredicted RBP27.05■■□□□ 1.92
CPNE1-212ENST00000430570 IRF2BP1Q8IU81 584 aa27.05■■□□□ 1.92
CPNE1-212ENST00000430570 GLYCTKQ8IVS8 523 aa27.05■■□□□ 1.92
CPNE1-212ENST00000430570 VN1R2Q8NFZ6 395 aa27.05■■□□□ 1.92
CPNE1-212ENST00000430570 METTL14Q9HCE5 456 aaKnown RBP27.05■■□□□ 1.92
CPNE1-212ENST00000430570 R3HCC1Q9Y3T6 440 aaKnown RBP27.05■■□□□ 1.92
CPNE1-212ENST00000430570 KLRC2P26717 231 aa27.04■■□□□ 1.92
CPNE1-212ENST00000430570 KCNC3Q14003 757 aa27.04■■□□□ 1.92
CPNE1-212ENST00000430570 TCERG1LQ5VWI1 586 aa27.04■■□□□ 1.92
CPNE1-212ENST00000430570 ANKS3Q6ZW76 656 aa27.04■■□□□ 1.92
CPNE1-212ENST00000430570 APPL2Q8NEU8 664 aa27.04■■□□□ 1.92
CPNE1-212ENST00000430570 SLC35C1Q96A29 364 aa27.04■■□□□ 1.92
CPNE1-212ENST00000430570 XYLT2Q9H1B5 865 aa27.04■■□□□ 1.92
CPNE1-212ENST00000430570 DNAJC25Q9H1X3 360 aa27.04■■□□□ 1.92
CPNE1-212ENST00000430570 PRDM6Q9NQX0 595 aa27.04■■□□□ 1.92
CPNE1-212ENST00000430570 APOBEC3CQ9NRW3 190 aaKnown RBP eCLIP27.04■■□□□ 1.92
CPNE1-212ENST00000430570 FNIP2Q9P278 1114 aa27.04■■□□□ 1.92
CPNE1-212ENST00000430570 MTRRQ9UBK8 725 aa27.04■■□□□ 1.92
CPNE1-212ENST00000430570 SNX9Q9Y5X1 595 aa27.04■■□□□ 1.92
CPNE1-212ENST00000430570 TBC1D4O60343 1298 aa27.03■■□□□ 1.92
CPNE1-212ENST00000430570 LRRN2O75325 713 aa27.03■■□□□ 1.92
CPNE1-212ENST00000430570 FGFR1OPO95684 399 aaKnown RBP27.03■■□□□ 1.92
CPNE1-212ENST00000430570 GNA14O95837 355 aa27.03■■□□□ 1.92
CPNE1-212ENST00000430570 TYMPP19971 482 aa27.03■■□□□ 1.92
CPNE1-212ENST00000430570 GTF2H1P32780 548 aa27.03■■□□□ 1.92
CPNE1-212ENST00000430570 MYO1EQ12965 1108 aa27.03■■□□□ 1.92
CPNE1-212ENST00000430570 ADAM15Q13444 863 aa27.03■■□□□ 1.92
CPNE1-212ENST00000430570 NCOA4Q13772 614 aa27.03■■□□□ 1.92
CPNE1-212ENST00000430570 COL19A1Q14993 1142 aa27.03■■□□□ 1.92
CPNE1-212ENST00000430570 CTC1Q2NKJ3 1217 aa27.03■■□□□ 1.92
CPNE1-212ENST00000430570 WSCD1Q658N2 575 aa27.03■■□□□ 1.92
CPNE1-212ENST00000430570 EFHBQ8N7U6 833 aa27.03■■□□□ 1.92
CPNE1-212ENST00000430570 SLC22A17Q8WUG5 538 aa27.03■■□□□ 1.92
CPNE1-212ENST00000430570 CDCA3Q99618 268 aaPredicted RBP27.03■■□□□ 1.92
CPNE1-212ENST00000430570 TMEM8AQ9HCN3 771 aa27.03■■□□□ 1.92
CPNE1-212ENST00000430570 GDAP2Q9NXN4 497 aa27.03■■□□□ 1.92
CPNE1-212ENST00000430570 BACE2Q9Y5Z0 518 aa27.03■■□□□ 1.92
CPNE1-212ENST00000430570 SYCE3A1L190 88 aa27.02■■□□□ 1.92
CPNE1-212ENST00000430570 GLP2RO95838 553 aa27.02■■□□□ 1.92
CPNE1-212ENST00000430570 HLA-DRAP01903 254 aa27.02■■□□□ 1.92
CPNE1-212ENST00000430570 CYP11A1P05108 521 aa27.02■■□□□ 1.92
CPNE1-212ENST00000430570 ODC1P11926 461 aa27.02■■□□□ 1.92
CPNE1-212ENST00000430570 MARSP56192 900 aaKnown RBP27.02■■□□□ 1.92
CPNE1-212ENST00000430570 YWHAHQ04917 246 aaPredicted RBP27.02■■□□□ 1.92
CPNE1-212ENST00000430570 TPD52L1Q16890 204 aaPredicted RBP27.02■■□□□ 1.92
CPNE1-212ENST00000430570 CBWD6Q4V339 395 aa27.02■■□□□ 1.92
Retrieved 100 of 20,778 RNA–protein pairs in 19.1 ms