RNA–Protein interactions for RNA: ENST00000429846.1

MSH5-208, Transcript of mutS homolog 5, humanhuman

TSL 3

Gene MSH5, Length 616 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MSH5-208ENST00000429846 PLD1Q13393 1074 aa16.2■□□□□ 0.18
MSH5-208ENST00000429846 ZBTB6Q15916 424 aa16.2■□□□□ 0.18
MSH5-208ENST00000429846 TANGO2Q6ICL3 276 aa16.2■□□□□ 0.18
MSH5-208ENST00000429846 USP37Q86T82 979 aa16.2■□□□□ 0.18
MSH5-208ENST00000429846 GPBP1Q86WP2 473 aa16.2■□□□□ 0.18
MSH5-208ENST00000429846 CD302Q8IX05 232 aa16.2■□□□□ 0.18
MSH5-208ENST00000429846 MAML2Q8IZL2 1156 aaPredicted RBP16.2■□□□□ 0.18
MSH5-208ENST00000429846 DEPDC1BQ8WUY9 529 aa16.2■□□□□ 0.18
MSH5-208ENST00000429846 CLDN23Q96B33 292 aa16.2■□□□□ 0.18
MSH5-208ENST00000429846 TCEAL4Q96EI5 215 aa16.2■□□□□ 0.18
MSH5-208ENST00000429846 ASB16Q96NS5 453 aa16.2■□□□□ 0.18
MSH5-208ENST00000429846 PLA2G2FQ9BZM2 168 aa16.2■□□□□ 0.18
MSH5-208ENST00000429846 HAPLN2Q9GZV7 340 aa16.2■□□□□ 0.18
MSH5-208ENST00000429846 SMC3Q9UQE7 1217 aa16.2■□□□□ 0.18
MSH5-208ENST00000429846 MTF2Q9Y483 593 aaPredicted RBP16.2■□□□□ 0.18
MSH5-208ENST00000429846 NPHP3-ACAD11A0A0J9YXS1 232 aa16.19■□□□□ 0.18
MSH5-208ENST00000429846 OR6C75A6NL08 312 aa16.19■□□□□ 0.18
MSH5-208ENST00000429846 SPTLC1O15269 473 aa16.19■□□□□ 0.18
MSH5-208ENST00000429846 FAM189A1O60320 539 aa16.19■□□□□ 0.18
MSH5-208ENST00000429846 KINO60870 393 aaKnown RBP16.19■□□□□ 0.18
MSH5-208ENST00000429846 ADRB2P07550 413 aa16.19■□□□□ 0.18
MSH5-208ENST00000429846 PSMC3P17980 439 aa16.19■□□□□ 0.18
MSH5-208ENST00000429846 TYMPP19971 482 aa16.19■□□□□ 0.18
MSH5-208ENST00000429846 TARSP26639 723 aaKnown RBP16.19■□□□□ 0.18
MSH5-208ENST00000429846 LONP1P36776 959 aaKnown RBP16.19■□□□□ 0.18
MSH5-208ENST00000429846 TNFSF9P41273 254 aa16.19■□□□□ 0.18
MSH5-208ENST00000429846 CCR2P41597 374 aa16.19■□□□□ 0.18
MSH5-208ENST00000429846 FAM78AQ5JUQ0 283 aa16.19■□□□□ 0.18
MSH5-208ENST00000429846 RNF19BQ6ZMZ0 732 aa16.19■□□□□ 0.18
MSH5-208ENST00000429846 BRAPQ7Z569 592 aa16.19■□□□□ 0.18
MSH5-208ENST00000429846 MYCT1Q8N699 235 aa16.19■□□□□ 0.18
MSH5-208ENST00000429846 SMARCD2Q92925 531 aa16.19■□□□□ 0.18
MSH5-208ENST00000429846 IRF7Q92985 503 aa16.19■□□□□ 0.18
MSH5-208ENST00000429846 TRMT61BQ9BVS5 477 aaKnown RBP16.19■□□□□ 0.18
MSH5-208ENST00000429846 GPR88Q9GZN0 384 aa16.19■□□□□ 0.18
MSH5-208ENST00000429846 BRD9Q9H8M2 597 aa16.19■□□□□ 0.18
MSH5-208ENST00000429846 RPF1Q9H9Y2 349 aaKnown RBP16.19■□□□□ 0.18
MSH5-208ENST00000429846 TRPV4Q9HBA0 871 aa16.19■□□□□ 0.18
MSH5-208ENST00000429846 TRPV5Q9NQA5 729 aa16.19■□□□□ 0.18
MSH5-208ENST00000429846 HEBP1Q9NRV9 189 aa16.19■□□□□ 0.18
MSH5-208ENST00000429846 CEP72Q9P209 647 aa16.19■□□□□ 0.18
MSH5-208ENST00000429846 YIPF1Q9Y548 306 aa16.19■□□□□ 0.18
MSH5-208ENST00000429846 PCDHGA2Q9Y5H1 932 aa16.19■□□□□ 0.18
MSH5-208ENST00000429846 TICRRQ7Z2Z1 1910 aa16.19■□□□□ 0.18
MSH5-208ENST00000429846 A0A0B4J269 797 aa16.18■□□□□ 0.18
MSH5-208ENST00000429846 LACTBL1A8MY62 500 aa16.18■□□□□ 0.18
MSH5-208ENST00000429846 MAN2B1O00754 1011 aa16.18■□□□□ 0.18
MSH5-208ENST00000429846 TRAK2O60296 914 aa16.18■□□□□ 0.18
MSH5-208ENST00000429846 TBCAO75347 108 aaKnown RBP16.18■□□□□ 0.18
MSH5-208ENST00000429846 CENPBP07199 599 aaPredicted RBP16.18■□□□□ 0.18
MSH5-208ENST00000429846 CD72P21854 359 aa16.18■□□□□ 0.18
MSH5-208ENST00000429846 SPAG1Q07617 926 aa16.18■□□□□ 0.18
MSH5-208ENST00000429846 MYBPC2Q14324 1141 aa16.18■□□□□ 0.18
MSH5-208ENST00000429846 ENOX2Q16206 610 aaKnown RBP16.18■□□□□ 0.18
MSH5-208ENST00000429846 LARP1BQ659C4 914 aaKnown RBP16.18■□□□□ 0.18
MSH5-208ENST00000429846 POTEHQ6S545 545 aa16.18■□□□□ 0.18
MSH5-208ENST00000429846 RASSF8Q8NHQ8 419 aa16.18■□□□□ 0.18
MSH5-208ENST00000429846 RUBCNQ92622 972 aa16.18■□□□□ 0.18
MSH5-208ENST00000429846 E2F7Q96AV8 911 aa16.18■□□□□ 0.18
MSH5-208ENST00000429846 IER2Q9BTL4 223 aa16.18■□□□□ 0.18
MSH5-208ENST00000429846 BLOC1S4Q9NUP1 217 aa16.18■□□□□ 0.18
MSH5-208ENST00000429846 ANK1P16157 1881 aa16.18■□□□□ 0.18
MSH5-208ENST00000429846 F5P12259 2224 aa16.18■□□□□ 0.18
MSH5-208ENST00000429846 NUP210Q8TEM1 1887 aaPredicted RBP16.17■□□□□ 0.18
MSH5-208ENST00000429846 CD2BP2O95400 341 aaKnown RBP16.17■□□□□ 0.18
MSH5-208ENST00000429846 KRT18P05783 430 aaKnown RBP16.17■□□□□ 0.18
MSH5-208ENST00000429846 ODC1P11926 461 aa16.17■□□□□ 0.18
MSH5-208ENST00000429846 PLCG1P19174 1290 aa16.17■□□□□ 0.18
MSH5-208ENST00000429846 GPR17Q13304 367 aa16.17■□□□□ 0.18
MSH5-208ENST00000429846 SPATA1Q5VX52 437 aa16.17■□□□□ 0.18
MSH5-208ENST00000429846 OVOS1Q6IE37 1185 aa16.17■□□□□ 0.18
MSH5-208ENST00000429846 DSTYKQ6XUX3 929 aa16.17■□□□□ 0.18
MSH5-208ENST00000429846 MAP4K3Q8IVH8 894 aa16.17■□□□□ 0.18
MSH5-208ENST00000429846 ZSCAN18Q8TBC5 510 aaPredicted RBP16.17■□□□□ 0.18
MSH5-208ENST00000429846 LARP4BQ92615 738 aaKnown RBP16.17■□□□□ 0.18
MSH5-208ENST00000429846 RAD54LQ92698 747 aa16.17■□□□□ 0.18
MSH5-208ENST00000429846 HINFPQ9BQA5 517 aa16.17■□□□□ 0.18
MSH5-208ENST00000429846 MSTO1Q9BUK6 570 aa16.17■□□□□ 0.18
MSH5-208ENST00000429846 HSFX1Q9UBD0 423 aa16.17■□□□□ 0.18
MSH5-208ENST00000429846 CPSF3Q9UKF6 684 aaKnown RBP16.17■□□□□ 0.18
MSH5-208ENST00000429846 DERAQ9Y315 318 aa16.17■□□□□ 0.18
MSH5-208ENST00000429846 CACNA1AO00555 2505 aa16.16■□□□□ 0.18
MSH5-208ENST00000429846 MOSPD3O75425 235 aa16.16■□□□□ 0.18
MSH5-208ENST00000429846 MYL4P12829 197 aa16.16■□□□□ 0.18
MSH5-208ENST00000429846 EPHB3P54753 998 aa16.16■□□□□ 0.18
MSH5-208ENST00000429846 GTF2BQ00403 316 aa16.16■□□□□ 0.18
MSH5-208ENST00000429846 GRM2Q14416 872 aa16.16■□□□□ 0.18
MSH5-208ENST00000429846 VITQ6UXI7 678 aa16.16■□□□□ 0.18
MSH5-208ENST00000429846 HS6ST3Q8IZP7 471 aa16.16■□□□□ 0.18
MSH5-208ENST00000429846 MSANTD3Q96H12 275 aa16.16■□□□□ 0.18
MSH5-208ENST00000429846 FIZ1Q96SL8 496 aa16.16■□□□□ 0.18
MSH5-208ENST00000429846 FAM126AQ9BYI3 521 aaPredicted RBP16.16■□□□□ 0.18
MSH5-208ENST00000429846 ST6GALNAC4Q9H4F1 302 aa16.16■□□□□ 0.18
MSH5-208ENST00000429846 SLITRK6Q9H5Y7 841 aa16.16■□□□□ 0.18
MSH5-208ENST00000429846 ASB7Q9H672 318 aa16.16■□□□□ 0.18
MSH5-208ENST00000429846 PRMT8Q9NR22 394 aaPredicted RBP16.16■□□□□ 0.18
MSH5-208ENST00000429846 ZSCAN32Q9NX65 697 aa16.16■□□□□ 0.18
MSH5-208ENST00000429846 ASB3Q9Y575 518 aa16.16■□□□□ 0.18
MSH5-208ENST00000429846 TIMM13Q9Y5L4 95 aaPredicted RBP16.16■□□□□ 0.18
MSH5-208ENST00000429846 TCHHQ07283 1943 aa16.15■□□□□ 0.18
Retrieved 100 of 20,778 RNA–protein pairs in 41.5 ms