RNA–Protein interactions for RNA: ENST00000429629.6

GARNL3-204, Transcript of GTPase activating Rap/RanGAP domain like 3, humanhuman

TSL 5

Gene GARNL3, Length 694 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GARNL3-204ENST00000429629 LIMS2Q7Z4I7 341 aa16.11■□□□□ 0.17
GARNL3-204ENST00000429629 IRF2BP1Q8IU81 584 aa16.11■□□□□ 0.17
GARNL3-204ENST00000429629 FAM114A1Q8IWE2 563 aa16.11■□□□□ 0.17
GARNL3-204ENST00000429629 TRIM59Q8IWR1 403 aa16.11■□□□□ 0.17
GARNL3-204ENST00000429629 MYLIPQ8WY64 445 aa16.11■□□□□ 0.17
GARNL3-204ENST00000429629 SLC35C1Q96A29 364 aa16.11■□□□□ 0.17
GARNL3-204ENST00000429629 EEF2KMTQ96G04 330 aa16.11■□□□□ 0.17
GARNL3-204ENST00000429629 CACNG4Q9UBN1 327 aa16.11■□□□□ 0.17
GARNL3-204ENST00000429629 BACE2Q9Y5Z0 518 aa16.11■□□□□ 0.17
GARNL3-204ENST00000429629 C2orf71A6NGG8 1288 aa16.1■□□□□ 0.17
GARNL3-204ENST00000429629 FOSL2P15408 326 aa16.1■□□□□ 0.17
GARNL3-204ENST00000429629 IGFBP6P24592 240 aaPredicted RBP16.1■□□□□ 0.17
GARNL3-204ENST00000429629 TRPC3Q13507 836 aa16.1■□□□□ 0.17
GARNL3-204ENST00000429629 COL19A1Q14993 1142 aa16.1■□□□□ 0.17
GARNL3-204ENST00000429629 PTPN14Q15678 1187 aa16.1■□□□□ 0.17
GARNL3-204ENST00000429629 TPD52L1Q16890 204 aaPredicted RBP16.1■□□□□ 0.17
GARNL3-204ENST00000429629 CCDC40Q4G0X9 1142 aa16.1■□□□□ 0.17
GARNL3-204ENST00000429629 TDRD10Q5VZ19 366 aaKnown RBP16.1■□□□□ 0.17
GARNL3-204ENST00000429629 SMYD5Q6GMV2 418 aa16.1■□□□□ 0.17
GARNL3-204ENST00000429629 PPFIBP1Q86W92 1011 aa16.1■□□□□ 0.17
GARNL3-204ENST00000429629 LNX1Q8TBB1 728 aaPredicted RBP16.1■□□□□ 0.17
GARNL3-204ENST00000429629 RABGGTAQ92696 567 aa16.1■□□□□ 0.17
GARNL3-204ENST00000429629 HPDLQ96IR7 371 aa16.1■□□□□ 0.17
GARNL3-204ENST00000429629 SENP8Q96LD8 212 aa16.1■□□□□ 0.17
GARNL3-204ENST00000429629 EMILIN2Q9BXX0 1053 aa16.1■□□□□ 0.17
GARNL3-204ENST00000429629 XYLT2Q9H1B5 865 aa16.1■□□□□ 0.17
GARNL3-204ENST00000429629 ENTPD7Q9NQZ7 604 aa16.1■□□□□ 0.17
GARNL3-204ENST00000429629 H7C4K7 107 aa16.09■□□□□ 0.17
GARNL3-204ENST00000429629 PPEF2O14830 753 aa16.09■□□□□ 0.17
GARNL3-204ENST00000429629 SPTLC1O15269 473 aa16.09■□□□□ 0.17
GARNL3-204ENST00000429629 TBC1D4O60343 1298 aa16.09■□□□□ 0.17
GARNL3-204ENST00000429629 N4BP1O75113 896 aaKnown RBP16.09■□□□□ 0.17
GARNL3-204ENST00000429629 PHACTR2O75167 634 aa16.09■□□□□ 0.17
GARNL3-204ENST00000429629 IGFBP4P22692 258 aa16.09■□□□□ 0.17
GARNL3-204ENST00000429629 IRS1P35568 1242 aa16.09■□□□□ 0.17
GARNL3-204ENST00000429629 BRCC3P46736 316 aa16.09■□□□□ 0.17
GARNL3-204ENST00000429629 PPP3CAQ08209 521 aa16.09■□□□□ 0.17
GARNL3-204ENST00000429629 NCOA4Q13772 614 aa16.09■□□□□ 0.17
GARNL3-204ENST00000429629 ZSCAN23Q3MJ62 389 aa16.09■□□□□ 0.17
GARNL3-204ENST00000429629 LMBRD2Q68DH5 695 aaPredicted RBP16.09■□□□□ 0.17
GARNL3-204ENST00000429629 DSTYKQ6XUX3 929 aa16.09■□□□□ 0.17
GARNL3-204ENST00000429629 TMEM184AQ6ZMB5 413 aa16.09■□□□□ 0.17
GARNL3-204ENST00000429629 TMEM86AQ8N2M4 240 aa16.09■□□□□ 0.17
GARNL3-204ENST00000429629 TOP6BLQ8N6T0 577 aa16.09■□□□□ 0.17
GARNL3-204ENST00000429629 FAM124BQ9H5Z6 455 aaPredicted RBP16.09■□□□□ 0.17
GARNL3-204ENST00000429629 MAFFQ9ULX9 164 aa16.09■□□□□ 0.17
GARNL3-204ENST00000429629 RALGAPA2Q2PPJ7 1873 aa16.08■□□□□ 0.17
GARNL3-204ENST00000429629 VNN1O95497 513 aa16.08■□□□□ 0.16
GARNL3-204ENST00000429629 KRT19P08727 400 aa16.08■□□□□ 0.16
GARNL3-204ENST00000429629 ODC1P11926 461 aa16.08■□□□□ 0.16
GARNL3-204ENST00000429629 EEF1GP26641 437 aaKnown RBP16.08■□□□□ 0.16
GARNL3-204ENST00000429629 GCLMP48507 274 aa16.08■□□□□ 0.16
GARNL3-204ENST00000429629 MYL5Q02045 173 aa16.08■□□□□ 0.16
GARNL3-204ENST00000429629 CETN1Q12798 172 aa16.08■□□□□ 0.16
GARNL3-204ENST00000429629 BIRC3Q13489 604 aa16.08■□□□□ 0.16
GARNL3-204ENST00000429629 DUSP6Q16828 381 aa16.08■□□□□ 0.16
GARNL3-204ENST00000429629 RTP2Q5QGT7 225 aa16.08■□□□□ 0.16
GARNL3-204ENST00000429629 SLC8B1Q6J4K2 584 aa16.08■□□□□ 0.16
GARNL3-204ENST00000429629 RTL10Q7L3V2 364 aa16.08■□□□□ 0.16
GARNL3-204ENST00000429629 HASPINQ8TF76 798 aa16.08■□□□□ 0.16
GARNL3-204ENST00000429629 RIN2Q8WYP3 895 aaPredicted RBP16.08■□□□□ 0.16
GARNL3-204ENST00000429629 TLE6Q9H808 572 aa16.08■□□□□ 0.16
GARNL3-204ENST00000429629 MTRRQ9UBK8 725 aa16.08■□□□□ 0.16
GARNL3-204ENST00000429629 DPP7Q9UHL4 492 aa16.08■□□□□ 0.16
GARNL3-204ENST00000429629 NFE2L3Q9Y4A8 694 aa16.08■□□□□ 0.16
GARNL3-204ENST00000429629 UTP18Q9Y5J1 556 aaKnown RBP eCLIP16.08■□□□□ 0.16
GARNL3-204ENST00000429629 SYCE3A1L190 88 aa16.07■□□□□ 0.16
GARNL3-204ENST00000429629 LRRC10BA6NIK2 292 aa16.07■□□□□ 0.16
GARNL3-204ENST00000429629 SMTNL1A8MU46 457 aa16.07■□□□□ 0.16
GARNL3-204ENST00000429629 HIDE1A8MVS5 230 aa16.07■□□□□ 0.16
GARNL3-204ENST00000429629 CYB561D2O14569 222 aa16.07■□□□□ 0.16
GARNL3-204ENST00000429629 HUS1O60921 280 aa16.07■□□□□ 0.16
GARNL3-204ENST00000429629 TACC1O75410 805 aa16.07■□□□□ 0.16
GARNL3-204ENST00000429629 ASS1P00966 412 aaKnown RBP16.07■□□□□ 0.16
GARNL3-204ENST00000429629 ADH1AP07327 375 aa16.07■□□□□ 0.16
GARNL3-204ENST00000429629 CNPP09543 421 aaKnown RBP16.07■□□□□ 0.16
GARNL3-204ENST00000429629 TKTP29401 623 aaKnown RBP16.07■□□□□ 0.16
GARNL3-204ENST00000429629 LHX1P48742 406 aa16.07■□□□□ 0.16
GARNL3-204ENST00000429629 NDUFV1P49821 464 aa16.07■□□□□ 0.16
GARNL3-204ENST00000429629 MXI1P50539 228 aa16.07■□□□□ 0.16
GARNL3-204ENST00000429629 YWHAHQ04917 246 aaPredicted RBP16.07■□□□□ 0.16
GARNL3-204ENST00000429629 CTC1Q2NKJ3 1217 aa16.07■□□□□ 0.16
GARNL3-204ENST00000429629 VARS2Q5ST30 1063 aaKnown RBP16.07■□□□□ 0.16
GARNL3-204ENST00000429629 CDKAL1Q5VV42 579 aa16.07■□□□□ 0.16
GARNL3-204ENST00000429629 C11orf57Q6ZUT1 292 aaPredicted RBP16.07■□□□□ 0.16
GARNL3-204ENST00000429629 METTL23Q86XA0 190 aa16.07■□□□□ 0.16
GARNL3-204ENST00000429629 FBXL13Q8NEE6 735 aa16.07■□□□□ 0.16
GARNL3-204ENST00000429629 HDAC7Q8WUI4 952 aa16.07■□□□□ 0.16
GARNL3-204ENST00000429629 CNOT6LQ96LI5 555 aaKnown RBP16.07■□□□□ 0.16
GARNL3-204ENST00000429629 KLHL5Q96PQ7 755 aa16.07■□□□□ 0.16
GARNL3-204ENST00000429629 DNAJC25Q9H1X3 360 aa16.07■□□□□ 0.16
GARNL3-204ENST00000429629 RAB20Q9NX57 234 aa16.07■□□□□ 0.16
GARNL3-204ENST00000429629 MAGEC2Q9UBF1 373 aaPredicted RBP16.07■□□□□ 0.16
GARNL3-204ENST00000429629 GBF1Q92538 1859 aa16.06■□□□□ 0.16
GARNL3-204ENST00000429629 ZC3H11BA0A1B0GUI2 810 aaPredicted RBP16.06■□□□□ 0.16
GARNL3-204ENST00000429629 OR6C75A6NL08 312 aa16.06■□□□□ 0.16
GARNL3-204ENST00000429629 GABRDO14764 452 aa16.06■□□□□ 0.16
GARNL3-204ENST00000429629 HLA-DRAP01903 254 aa16.06■□□□□ 0.16
GARNL3-204ENST00000429629 AFPP02771 609 aaKnown RBP16.06■□□□□ 0.16
GARNL3-204ENST00000429629 TRIM49P0CI25 452 aa16.06■□□□□ 0.16
Retrieved 100 of 20,778 RNA–protein pairs in 23.2 ms