RNA–Protein interactions for RNA: ENST00000429277.6

LDB3-205, Transcript of LIM domain binding 3, humanhuman

TSL 2 BASIC

Gene LDB3, Length 5,436 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LDB3-205ENST00000429277 GID8Q9NWU2 228 aa13.4□□□□□ -0.26
LDB3-205ENST00000429277 MPP6Q9NZW5 540 aa13.4□□□□□ -0.26
LDB3-205ENST00000429277 NEU2Q9Y3R4 380 aa13.4□□□□□ -0.26
LDB3-205ENST00000429277 GRIN3BO60391 1043 aa13.4□□□□□ -0.26
LDB3-205ENST00000429277 RPS6KA5O75582 802 aa13.4□□□□□ -0.26
LDB3-205ENST00000429277 ASMTLO95671 621 aa13.4□□□□□ -0.26
LDB3-205ENST00000429277 RAD23BP54727 409 aa13.4□□□□□ -0.26
LDB3-205ENST00000429277 ATF7IP2Q5U623 682 aa13.4□□□□□ -0.26
LDB3-205ENST00000429277 IGDCC4Q8TDY8 1250 aa13.4□□□□□ -0.26
LDB3-205ENST00000429277 GPRASP2Q96D09 838 aa13.4□□□□□ -0.26
LDB3-205ENST00000429277 JCADQ9P266 1359 aa13.4□□□□□ -0.26
LDB3-205ENST00000429277 FAM47DPA6NHR8 397 aa13.4□□□□□ -0.26
LDB3-205ENST00000429277 SNRPAP09012 282 aaKnown RBP13.4□□□□□ -0.26
LDB3-205ENST00000429277 MYL2P10916 166 aa13.4□□□□□ -0.26
LDB3-205ENST00000429277 PSMA3P25788 255 aa13.4□□□□□ -0.26
LDB3-205ENST00000429277 ZNF34Q8IZ26 560 aa13.4□□□□□ -0.26
LDB3-205ENST00000429277 ZMAT2Q96NC0 199 aaKnown RBP13.4□□□□□ -0.26
LDB3-205ENST00000429277 UNC45AQ9H3U1 944 aa13.4□□□□□ -0.26
LDB3-205ENST00000429277 TUBE1Q9UJT0 475 aa13.4□□□□□ -0.26
LDB3-205ENST00000429277 PRR12Q9ULL5 1215 aa13.4□□□□□ -0.26
LDB3-205ENST00000429277 AXIN2Q9Y2T1 843 aa13.4□□□□□ -0.26
LDB3-205ENST00000429277 MTO1Q9Y2Z2 717 aaKnown RBP13.4□□□□□ -0.26
LDB3-205ENST00000429277 PNPLA6Q8IY17 1366 aa13.4□□□□□ -0.26
LDB3-205ENST00000429277 DEAF1O75398 565 aaPredicted RBP13.39□□□□□ -0.27
LDB3-205ENST00000429277 AKT1P31749 480 aa13.39□□□□□ -0.27
LDB3-205ENST00000429277 NKX1-1Q15270 411 aaPredicted RBP13.39□□□□□ -0.27
LDB3-205ENST00000429277 CLMNQ96JQ2 1002 aa13.39□□□□□ -0.27
LDB3-205ENST00000429277 RMDN2Q96LZ7 410 aa13.39□□□□□ -0.27
LDB3-205ENST00000429277 EPN3Q9H201 632 aa13.39□□□□□ -0.27
LDB3-205ENST00000429277 ZC4H2Q9NQZ6 224 aa13.39□□□□□ -0.27
LDB3-205ENST00000429277 XPO7Q9UIA9 1087 aaKnown RBP13.39□□□□□ -0.27
LDB3-205ENST00000429277 CNOT7Q9UIV1 285 aaKnown RBP13.39□□□□□ -0.27
LDB3-205ENST00000429277 GRID1Q9ULK0 1009 aa13.39□□□□□ -0.27
LDB3-205ENST00000429277 CDY2AQ9Y6F7 541 aa13.39□□□□□ -0.27
LDB3-205ENST00000429277 CDY1Q9Y6F8 540 aa13.39□□□□□ -0.27
LDB3-205ENST00000429277 ZCCHC11Q5TAX3 1644 aaKnown RBP13.39□□□□□ -0.27
LDB3-205ENST00000429277 KRT87PA6NCN2 255 aa13.39□□□□□ -0.27
LDB3-205ENST00000429277 NPEPPSP55786 919 aa13.39□□□□□ -0.27
LDB3-205ENST00000429277 SFSWAPQ12872 951 aaKnown RBP13.39□□□□□ -0.27
LDB3-205ENST00000429277 LAMC2Q13753 1193 aa13.39□□□□□ -0.27
LDB3-205ENST00000429277 PHF21AQ96BD5 680 aa13.39□□□□□ -0.27
LDB3-205ENST00000429277 PRPF18Q99633 342 aaKnown RBP13.39□□□□□ -0.27
LDB3-205ENST00000429277 NDEL1Q9GZM8 345 aa13.39□□□□□ -0.27
LDB3-205ENST00000429277 ELP3Q9H9T3 547 aa13.39□□□□□ -0.27
LDB3-205ENST00000429277 MLXIPLQ9NP71 852 aa13.39□□□□□ -0.27
LDB3-205ENST00000429277 TRAF3IP3Q9Y228 551 aa13.39□□□□□ -0.27
LDB3-205ENST00000429277 TRPM1Q7Z4N2 1603 aa13.39□□□□□ -0.27
LDB3-205ENST00000429277 SRP72O76094 671 aaKnown RBP13.39□□□□□ -0.27
LDB3-205ENST00000429277 CSF1RP07333 972 aa13.39□□□□□ -0.27
LDB3-205ENST00000429277 GPD1P21695 349 aa13.39□□□□□ -0.27
LDB3-205ENST00000429277 PRKCEQ02156 737 aa13.39□□□□□ -0.27
LDB3-205ENST00000429277 DDX53Q86TM3 631 aaKnown RBP13.39□□□□□ -0.27
LDB3-205ENST00000429277 CCNJLQ8IV13 435 aa13.39□□□□□ -0.27
LDB3-205ENST00000429277 GSPT2Q8IYD1 628 aaKnown RBP13.39□□□□□ -0.27
LDB3-205ENST00000429277 SHCBP1Q8NEM2 672 aa13.39□□□□□ -0.27
LDB3-205ENST00000429277 OSBPL8Q9BZF1 889 aa13.39□□□□□ -0.27
LDB3-205ENST00000429277 ZNF70Q9UC06 446 aaPredicted RBP13.39□□□□□ -0.27
LDB3-205ENST00000429277 MORC2Q9Y6X9 1032 aaPredicted RBP13.39□□□□□ -0.27
LDB3-205ENST00000429277 CLASP2O75122 1294 aaKnown RBP13.39□□□□□ -0.27
LDB3-205ENST00000429277 FGFR4P22455 802 aa13.39□□□□□ -0.27
LDB3-205ENST00000429277 LRRC14Q15048 493 aa13.39□□□□□ -0.27
LDB3-205ENST00000429277 BOLA3Q53S33 107 aa13.39□□□□□ -0.27
LDB3-205ENST00000429277 NOTUMQ6P988 496 aa13.39□□□□□ -0.27
LDB3-205ENST00000429277 SLITRK1Q96PX8 696 aa13.39□□□□□ -0.27
LDB3-205ENST00000429277 CCDC134Q9H6E4 229 aa13.39□□□□□ -0.27
LDB3-205ENST00000429277 SPON1Q9HCB6 807 aa13.39□□□□□ -0.27
LDB3-205ENST00000429277 GIMAP4Q9NUV9 329 aa13.39□□□□□ -0.27
LDB3-205ENST00000429277 SH3BP1Q9Y3L3 701 aa13.39□□□□□ -0.27
LDB3-205ENST00000429277 CETPP11597 493 aa13.38□□□□□ -0.27
LDB3-205ENST00000429277 CPT1AP50416 773 aa13.38□□□□□ -0.27
LDB3-205ENST00000429277 UGT3A1Q6NUS8 523 aa13.38□□□□□ -0.27
LDB3-205ENST00000429277 SLC7A14Q8TBB6 771 aa13.38□□□□□ -0.27
LDB3-205ENST00000429277 TADA1Q96BN2 335 aa13.38□□□□□ -0.27
LDB3-205ENST00000429277 OPTNQ96CV9 577 aa13.38□□□□□ -0.27
LDB3-205ENST00000429277 ELMO2Q96JJ3 720 aa13.38□□□□□ -0.27
LDB3-205ENST00000429277 LATS2Q9NRM7 1088 aa13.38□□□□□ -0.27
LDB3-205ENST00000429277 HACL1Q9UJ83 578 aa13.38□□□□□ -0.27
LDB3-205ENST00000429277 TARBP1Q13395 1621 aaKnown RBP13.38□□□□□ -0.27
LDB3-205ENST00000429277 VGLL3A8MV65 326 aa13.38□□□□□ -0.27
LDB3-205ENST00000429277 ZNF263O14978 683 aa13.38□□□□□ -0.27
LDB3-205ENST00000429277 DYNC1LI2O43237 492 aaPredicted RBP13.38□□□□□ -0.27
LDB3-205ENST00000429277 ANXA9O76027 345 aa13.38□□□□□ -0.27
LDB3-205ENST00000429277 HLA-DRAP01903 254 aa13.38□□□□□ -0.27
LDB3-205ENST00000429277 ICE2Q659A1 982 aa13.38□□□□□ -0.27
LDB3-205ENST00000429277 TMEM143Q96AN5 459 aa13.38□□□□□ -0.27
LDB3-205ENST00000429277 MCEEQ96PE7 176 aa13.38□□□□□ -0.27
LDB3-205ENST00000429277 KIAA1257Q9ULG3 409 aa13.38□□□□□ -0.27
LDB3-205ENST00000429277 USP15Q9Y4E8 981 aaPredicted RBP13.38□□□□□ -0.27
LDB3-205ENST00000429277 GLI2P10070 1586 aa13.38□□□□□ -0.27
LDB3-205ENST00000429277 RARBP10826 455 aa13.38□□□□□ -0.27
LDB3-205ENST00000429277 ACOT2P49753 483 aa13.38□□□□□ -0.27
LDB3-205ENST00000429277 DGKDQ16760 1214 aa13.38□□□□□ -0.27
LDB3-205ENST00000429277 STYK1Q6J9G0 422 aa13.38□□□□□ -0.27
LDB3-205ENST00000429277 BBS7Q8IWZ6 715 aa13.38□□□□□ -0.27
LDB3-205ENST00000429277 ABHD8Q96I13 439 aa13.38□□□□□ -0.27
LDB3-205ENST00000429277 RBBP8Q99708 897 aa13.38□□□□□ -0.27
LDB3-205ENST00000429277 CDYLQ9Y232 598 aa13.38□□□□□ -0.27
LDB3-205ENST00000429277 ZBTB7AO95365 584 aa13.38□□□□□ -0.27
LDB3-205ENST00000429277 ARIH2O95376 493 aa13.38□□□□□ -0.27
LDB3-205ENST00000429277 FDFT1P37268 417 aa13.38□□□□□ -0.27
Retrieved 100 of 20,778 RNA–protein pairs in 25.4 ms