RNA–Protein interactions for RNA: ENST00000428868.1

SMC6-204, Transcript of structural maintenance of chromosomes 6, humanhuman

TSL 4

Gene SMC6, Length 544 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMC6-204ENST00000428868 FAM228BP0C875 321 aa9.53□□□□□ -0.88
SMC6-204ENST00000428868 KRT5P13647 590 aa9.53□□□□□ -0.88
SMC6-204ENST00000428868 FERP16591 822 aa9.53□□□□□ -0.88
SMC6-204ENST00000428868 CHRNB2P17787 502 aa9.53□□□□□ -0.88
SMC6-204ENST00000428868 CD58P19256 250 aa9.53□□□□□ -0.88
SMC6-204ENST00000428868 SSTR3P32745 418 aaPredicted RBP9.53□□□□□ -0.88
SMC6-204ENST00000428868 KCNJ6P48051 423 aa9.53□□□□□ -0.88
SMC6-204ENST00000428868 ORC1Q13415 861 aa9.53□□□□□ -0.88
SMC6-204ENST00000428868 TSR1Q2NL82 804 aaKnown RBP9.53□□□□□ -0.88
SMC6-204ENST00000428868 WDR44Q5JSH3 913 aa9.53□□□□□ -0.88
SMC6-204ENST00000428868 CLLU1OSQ5K130 101 aa9.53□□□□□ -0.88
SMC6-204ENST00000428868 TAF3Q5VWG9 929 aa9.53□□□□□ -0.88
SMC6-204ENST00000428868 C9orf57Q5W0N0 161 aa9.53□□□□□ -0.88
SMC6-204ENST00000428868 DEFB128Q7Z7B8 93 aa9.53□□□□□ -0.88
SMC6-204ENST00000428868 UBE2Q1Q7Z7E8 422 aa9.53□□□□□ -0.88
SMC6-204ENST00000428868 NOP9Q86U38 636 aaKnown RBP9.53□□□□□ -0.88
SMC6-204ENST00000428868 SLC47A2Q86VL8 602 aa9.53□□□□□ -0.88
SMC6-204ENST00000428868 CD302Q8IX05 232 aa9.53□□□□□ -0.88
SMC6-204ENST00000428868 FAM71AQ8IYT1 594 aa9.53□□□□□ -0.88
SMC6-204ENST00000428868 USP38Q8NB14 1042 aa9.53□□□□□ -0.88
SMC6-204ENST00000428868 BEST2Q8NFU1 509 aa9.53□□□□□ -0.88
SMC6-204ENST00000428868 TRIM43Q96BQ3 446 aaPredicted RBP9.53□□□□□ -0.88
SMC6-204ENST00000428868 TOX2Q96NM4 488 aa9.53□□□□□ -0.88
SMC6-204ENST00000428868 PAAF1Q9BRP4 392 aa9.53□□□□□ -0.88
SMC6-204ENST00000428868 TRAIPQ9BWF2 469 aa9.53□□□□□ -0.88
SMC6-204ENST00000428868 NIF3L1Q9GZT8 377 aa9.53□□□□□ -0.88
SMC6-204ENST00000428868 RSAD1Q9HA92 442 aa9.53□□□□□ -0.88
SMC6-204ENST00000428868 RGS18Q9NS28 235 aa9.53□□□□□ -0.88
SMC6-204ENST00000428868 ZNHIT6Q9NWK9 470 aaKnown RBP9.53□□□□□ -0.88
SMC6-204ENST00000428868 HCSTQ9UBK5 93 aa9.53□□□□□ -0.88
SMC6-204ENST00000428868 NXF1Q9UBU9 619 aaKnown RBP9.53□□□□□ -0.88
SMC6-204ENST00000428868 TRIM10Q9UDY6 481 aa9.53□□□□□ -0.88
SMC6-204ENST00000428868 NOCTQ9UK39 431 aaKnown RBP9.53□□□□□ -0.88
SMC6-204ENST00000428868 ITGA11Q9UKX5 1188 aa9.53□□□□□ -0.88
SMC6-204ENST00000428868 UBQLN1Q9UMX0 589 aaKnown RBP9.53□□□□□ -0.88
SMC6-204ENST00000428868 NENFQ9UMX5 172 aa9.53□□□□□ -0.88
SMC6-204ENST00000428868 INPP5FQ9Y2H2 1132 aa9.53□□□□□ -0.88
SMC6-204ENST00000428868 GREB1Q4ZG55 1949 aa9.52□□□□□ -0.88
SMC6-204ENST00000428868 LOC101059915A0A1B0GWI6 518 aaPredicted RBP9.52□□□□□ -0.89
SMC6-204ENST00000428868 SSU72P8A0A1W2PR75 194 aa9.52□□□□□ -0.89
SMC6-204ENST00000428868 ANO9A1A5B4 782 aa9.52□□□□□ -0.89
SMC6-204ENST00000428868 EIF3CLB5ME19 914 aaKnown RBP9.52□□□□□ -0.89
SMC6-204ENST00000428868 F8W810 466 aa9.52□□□□□ -0.89
SMC6-204ENST00000428868 PIRO00625 290 aa9.52□□□□□ -0.89
SMC6-204ENST00000428868 ZNF500O60304 480 aaPredicted RBP9.52□□□□□ -0.89
SMC6-204ENST00000428868 POMCP01189 267 aa9.52□□□□□ -0.89
SMC6-204ENST00000428868 CXCL10P02778 98 aa9.52□□□□□ -0.89
SMC6-204ENST00000428868 FGFR1P11362 822 aa9.52□□□□□ -0.89
SMC6-204ENST00000428868 ARHGAP25P42331 645 aa9.52□□□□□ -0.89
SMC6-204ENST00000428868 RAB27AP51159 221 aa9.52□□□□□ -0.89
SMC6-204ENST00000428868 ZNF132P52740 706 aa9.52□□□□□ -0.89
SMC6-204ENST00000428868 MFAP3P55082 362 aa9.52□□□□□ -0.89
SMC6-204ENST00000428868 SGSM1Q2NKQ1 1148 aa9.52□□□□□ -0.89
SMC6-204ENST00000428868 WDR72Q3MJ13 1102 aa9.52□□□□□ -0.89
SMC6-204ENST00000428868 ZNF667Q5HYK9 610 aa9.52□□□□□ -0.89
SMC6-204ENST00000428868 TMEM270Q6UE05 265 aa9.52□□□□□ -0.89
SMC6-204ENST00000428868 NECAB2Q7Z6G3 386 aa9.52□□□□□ -0.89
SMC6-204ENST00000428868 NT5DC4Q86YG4 428 aa9.52□□□□□ -0.89
SMC6-204ENST00000428868 RBBP8NLQ8NC74 664 aaPredicted RBP9.52□□□□□ -0.89
SMC6-204ENST00000428868 C3orf58Q8NDZ4 430 aa9.52□□□□□ -0.89
SMC6-204ENST00000428868 EPS8L1Q8TE68 723 aa9.52□□□□□ -0.89
SMC6-204ENST00000428868 WHAMMQ8TF30 809 aa9.52□□□□□ -0.89
SMC6-204ENST00000428868 DDX1Q92499 740 aaKnown RBP9.52□□□□□ -0.89
SMC6-204ENST00000428868 HPDLQ96IR7 371 aa9.52□□□□□ -0.89
SMC6-204ENST00000428868 TWNKQ96RR1 684 aa9.52□□□□□ -0.89
SMC6-204ENST00000428868 PCDHB18PQ96TA0 734 aa9.52□□□□□ -0.89
SMC6-204ENST00000428868 EIF3CQ99613 913 aaKnown RBP9.52□□□□□ -0.89
SMC6-204ENST00000428868 ZSWIM1Q9BR11 485 aa9.52□□□□□ -0.89
SMC6-204ENST00000428868 TMEM106CQ9BVX2 250 aa9.52□□□□□ -0.89
SMC6-204ENST00000428868 PACSIN1Q9BY11 444 aa9.52□□□□□ -0.89
SMC6-204ENST00000428868 BCO2Q9BYV7 579 aa9.52□□□□□ -0.89
SMC6-204ENST00000428868 NUCKS1Q9H1E3 243 aaKnown RBP9.52□□□□□ -0.89
SMC6-204ENST00000428868 TSPYL2Q9H2G4 693 aaPredicted RBP9.52□□□□□ -0.89
SMC6-204ENST00000428868 PRDM5Q9NQX1 630 aaPredicted RBP9.52□□□□□ -0.89
SMC6-204ENST00000428868 TMEM39AQ9NV64 488 aa9.52□□□□□ -0.89
SMC6-204ENST00000428868 TAS2R14Q9NYV8 317 aa9.52□□□□□ -0.89
SMC6-204ENST00000428868 GIT1Q9Y2X7 761 aa9.52□□□□□ -0.89
SMC6-204ENST00000428868 DAAM1Q9Y4D1 1078 aa9.52□□□□□ -0.89
SMC6-204ENST00000428868 PCDHB4Q9Y5E5 795 aa9.52□□□□□ -0.89
SMC6-204ENST00000428868 CASTOR2A6NHX0 329 aa9.51□□□□□ -0.89
SMC6-204ENST00000428868 ENPP3O14638 875 aa9.51□□□□□ -0.89
SMC6-204ENST00000428868 FANCGO15287 622 aa9.51□□□□□ -0.89
SMC6-204ENST00000428868 NRDCO43847 1150 aa9.51□□□□□ -0.89
SMC6-204ENST00000428868 AKR1B10O60218 316 aa9.51□□□□□ -0.89
SMC6-204ENST00000428868 OFD1O75665 1012 aa9.51□□□□□ -0.89
SMC6-204ENST00000428868 LCA5LO95447 670 aa9.51□□□□□ -0.89
SMC6-204ENST00000428868 STAU1O95793 577 aaKnown RBP9.51□□□□□ -0.89
SMC6-204ENST00000428868 MMEP08473 750 aa9.51□□□□□ -0.89
SMC6-204ENST00000428868 CYLC1P35663 651 aaPredicted RBP9.51□□□□□ -0.89
SMC6-204ENST00000428868 FAM189BP81408 668 aa9.51□□□□□ -0.89
SMC6-204ENST00000428868 RBP5P82980 135 aa9.51□□□□□ -0.89
SMC6-204ENST00000428868 FMO1Q01740 532 aa9.51□□□□□ -0.89
SMC6-204ENST00000428868 ZNF394Q53GI3 561 aa9.51□□□□□ -0.89
SMC6-204ENST00000428868 CD300LGQ6UXG3 332 aa9.51□□□□□ -0.89
SMC6-204ENST00000428868 LIN28BQ6ZN17 250 aaKnown RBP eCLIP9.51□□□□□ -0.89
SMC6-204ENST00000428868 OSTM1Q86WC4 334 aa9.51□□□□□ -0.89
SMC6-204ENST00000428868 GLYCTKQ8IVS8 523 aa9.51□□□□□ -0.89
SMC6-204ENST00000428868 CCDC170Q8IYT3 715 aa9.51□□□□□ -0.89
SMC6-204ENST00000428868 RPUSD2Q8IZ73 545 aaKnown RBP9.51□□□□□ -0.89
SMC6-204ENST00000428868 SLC30A5Q8TAD4 765 aa9.51□□□□□ -0.89
Retrieved 100 of 20,778 RNA–protein pairs in 31.5 ms