RNA–Protein interactions for RNA: ENST00000428774.1

CRIM1-204, Transcript of cysteine rich transmembrane BMP regulator 1, humanhuman

TSL 3

Gene CRIM1, Length 700 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CRIM1-204ENST00000428774 SDCBP2Q9H190 292 aa11.64□□□□□ -0.55
CRIM1-204ENST00000428774 ELAC1Q9H777 363 aaKnown RBP11.64□□□□□ -0.55
CRIM1-204ENST00000428774 SMYD3Q9H7B4 428 aa11.64□□□□□ -0.55
CRIM1-204ENST00000428774 TMEM161AQ9NX61 479 aa11.64□□□□□ -0.55
CRIM1-204ENST00000428774 PRKAG2Q9UGJ0 569 aa11.64□□□□□ -0.55
CRIM1-204ENST00000428774 INPP5FQ9Y2H2 1132 aa11.64□□□□□ -0.55
CRIM1-204ENST00000428774 FOXN3O00409 490 aaPredicted RBP11.63□□□□□ -0.55
CRIM1-204ENST00000428774 PIRO00625 290 aa11.63□□□□□ -0.55
CRIM1-204ENST00000428774 B4GALT3O60512 393 aa11.63□□□□□ -0.55
CRIM1-204ENST00000428774 EOMESO95936 686 aa11.63□□□□□ -0.55
CRIM1-204ENST00000428774 POMCP01189 267 aa11.63□□□□□ -0.55
CRIM1-204ENST00000428774 SERPING1P05155 500 aa11.63□□□□□ -0.55
CRIM1-204ENST00000428774 THP07101 528 aa11.63□□□□□ -0.55
CRIM1-204ENST00000428774 TBXAS1P24557 533 aaPredicted RBP11.63□□□□□ -0.55
CRIM1-204ENST00000428774 EIF4A3P38919 411 aaKnown RBP11.63□□□□□ -0.55
CRIM1-204ENST00000428774 KCNJ6P48051 423 aa11.63□□□□□ -0.55
CRIM1-204ENST00000428774 GATMP50440 423 aa11.63□□□□□ -0.55
CRIM1-204ENST00000428774 MAPK8IP2Q13387 824 aaPredicted RBP11.63□□□□□ -0.55
CRIM1-204ENST00000428774 TSR1Q2NL82 804 aaKnown RBP11.63□□□□□ -0.55
CRIM1-204ENST00000428774 FAM43BQ6ZT52 329 aaPredicted RBP11.63□□□□□ -0.55
CRIM1-204ENST00000428774 TOGARAM2Q6ZUX3 1019 aa11.63□□□□□ -0.55
CRIM1-204ENST00000428774 IRF2BP2Q7Z5L9 587 aa11.63□□□□□ -0.55
CRIM1-204ENST00000428774 ZSCAN30Q86W11 494 aa11.63□□□□□ -0.55
CRIM1-204ENST00000428774 TMTC1Q8IUR5 882 aa11.63□□□□□ -0.55
CRIM1-204ENST00000428774 FAM71AQ8IYT1 594 aa11.63□□□□□ -0.55
CRIM1-204ENST00000428774 CRIPAKQ8N1N5 446 aa11.63□□□□□ -0.55
CRIM1-204ENST00000428774 C17orf53Q8N3J3 647 aaPredicted RBP11.63□□□□□ -0.55
CRIM1-204ENST00000428774 LRRC52Q8N7C0 313 aa11.63□□□□□ -0.55
CRIM1-204ENST00000428774 HPDLQ96IR7 371 aa11.63□□□□□ -0.55
CRIM1-204ENST00000428774 FAM81BQ96LP2 452 aa11.63□□□□□ -0.55
CRIM1-204ENST00000428774 ZNF560Q96MR9 790 aa11.63□□□□□ -0.55
CRIM1-204ENST00000428774 DESI2Q9BSY9 194 aa11.63□□□□□ -0.55
CRIM1-204ENST00000428774 SYT11Q9BT88 431 aa11.63□□□□□ -0.55
CRIM1-204ENST00000428774 HAUS4Q9H6D7 363 aa11.63□□□□□ -0.55
CRIM1-204ENST00000428774 UBN1Q9NPG3 1134 aa11.63□□□□□ -0.55
CRIM1-204ENST00000428774 SLC38A7Q9NVC3 462 aa11.63□□□□□ -0.55
CRIM1-204ENST00000428774 ZNHIT6Q9NWK9 470 aaKnown RBP11.63□□□□□ -0.55
CRIM1-204ENST00000428774 NXF1Q9UBU9 619 aaKnown RBP11.63□□□□□ -0.55
CRIM1-204ENST00000428774 SSU72P8A0A1W2PR75 194 aa11.62□□□□□ -0.55
CRIM1-204ENST00000428774 CASTOR2A6NHX0 329 aa11.62□□□□□ -0.55
CRIM1-204ENST00000428774 SPTLC1O15269 473 aa11.62□□□□□ -0.55
CRIM1-204ENST00000428774 IGFBP6P24592 240 aaPredicted RBP11.62□□□□□ -0.55
CRIM1-204ENST00000428774 USP8P40818 1118 aa11.62□□□□□ -0.55
CRIM1-204ENST00000428774 KIF11P52732 1056 aa11.62□□□□□ -0.55
CRIM1-204ENST00000428774 FPGSQ05932 587 aa11.62□□□□□ -0.55
CRIM1-204ENST00000428774 KLHL30Q0D2K2 578 aa11.62□□□□□ -0.55
CRIM1-204ENST00000428774 ASTE1Q2TB18 679 aaPredicted RBP11.62□□□□□ -0.55
CRIM1-204ENST00000428774 WDR72Q3MJ13 1102 aa11.62□□□□□ -0.55
CRIM1-204ENST00000428774 LIN28BQ6ZN17 250 aaKnown RBP eCLIP11.62□□□□□ -0.55
CRIM1-204ENST00000428774 ZNF571Q7Z3V5 609 aaPredicted RBP11.62□□□□□ -0.55
CRIM1-204ENST00000428774 RBBP8NLQ8NC74 664 aaPredicted RBP11.62□□□□□ -0.55
CRIM1-204ENST00000428774 C3orf58Q8NDZ4 430 aa11.62□□□□□ -0.55
CRIM1-204ENST00000428774 ACRBPQ8NEB7 543 aa11.62□□□□□ -0.55
CRIM1-204ENST00000428774 KIAA1524Q8TCG1 905 aa11.62□□□□□ -0.55
CRIM1-204ENST00000428774 EPS8L1Q8TE68 723 aa11.62□□□□□ -0.55
CRIM1-204ENST00000428774 SLC20A1Q8WUM9 679 aa11.62□□□□□ -0.55
CRIM1-204ENST00000428774 PAAF1Q9BRP4 392 aa11.62□□□□□ -0.55
CRIM1-204ENST00000428774 NHEJ1Q9H9Q4 299 aaPredicted RBP11.62□□□□□ -0.55
CRIM1-204ENST00000428774 ACP6Q9NPH0 428 aa11.62□□□□□ -0.55
CRIM1-204ENST00000428774 CNTN6Q9UQ52 1028 aa11.62□□□□□ -0.55
CRIM1-204ENST00000428774 REXO2Q9Y3B8 237 aaKnown RBP11.62□□□□□ -0.55
CRIM1-204ENST00000428774 PCDHB4Q9Y5E5 795 aa11.62□□□□□ -0.55
CRIM1-204ENST00000428774 NR2E3Q9Y5X4 410 aa11.62□□□□□ -0.55
CRIM1-204ENST00000428774 USP27XA6NNY8 438 aa11.61□□□□□ -0.55
CRIM1-204ENST00000428774 PODXLO00592 558 aa11.61□□□□□ -0.55
CRIM1-204ENST00000428774 CYP26A1O43174 497 aa11.61□□□□□ -0.55
CRIM1-204ENST00000428774 NDUFA10O95299 355 aa11.61□□□□□ -0.55
CRIM1-204ENST00000428774 CALCAP01258 141 aa11.61□□□□□ -0.55
CRIM1-204ENST00000428774 KRT5P13647 590 aa11.61□□□□□ -0.55
CRIM1-204ENST00000428774 CD58P19256 250 aa11.61□□□□□ -0.55
CRIM1-204ENST00000428774 CLCN1P35523 988 aa11.61□□□□□ -0.55
CRIM1-204ENST00000428774 TAF6P49848 677 aa11.61□□□□□ -0.55
CRIM1-204ENST00000428774 CLCNKBP51801 687 aa11.61□□□□□ -0.55
CRIM1-204ENST00000428774 ZNF132P52740 706 aa11.61□□□□□ -0.55
CRIM1-204ENST00000428774 TNNC1P63316 161 aa11.61□□□□□ -0.55
CRIM1-204ENST00000428774 PTK2Q05397 1052 aa11.61□□□□□ -0.55
CRIM1-204ENST00000428774 DSC1Q08554 894 aa11.61□□□□□ -0.55
CRIM1-204ENST00000428774 MYO1EQ12965 1108 aa11.61□□□□□ -0.55
CRIM1-204ENST00000428774 TUSC3Q13454 348 aa11.61□□□□□ -0.55
CRIM1-204ENST00000428774 SV2CQ496J9 727 aa11.61□□□□□ -0.55
CRIM1-204ENST00000428774 NOMO2Q5JPE7 1267 aa11.61□□□□□ -0.55
CRIM1-204ENST00000428774 C9orf50Q5SZB4 431 aa11.61□□□□□ -0.55
CRIM1-204ENST00000428774 GLB1LQ6UWU2 654 aa11.61□□□□□ -0.55
CRIM1-204ENST00000428774 NOP9Q86U38 636 aaKnown RBP11.61□□□□□ -0.55
CRIM1-204ENST00000428774 NPAS4Q8IUM7 802 aa11.61□□□□□ -0.55
CRIM1-204ENST00000428774 TMEM199Q8N511 208 aa11.61□□□□□ -0.55
CRIM1-204ENST00000428774 LNX1Q8TBB1 728 aaPredicted RBP11.61□□□□□ -0.55
CRIM1-204ENST00000428774 URGCPQ8TCY9 931 aa11.61□□□□□ -0.55
CRIM1-204ENST00000428774 JAKMIP2Q96AA8 810 aa11.61□□□□□ -0.55
CRIM1-204ENST00000428774 FAXDC2Q96IV6 333 aa11.61□□□□□ -0.55
CRIM1-204ENST00000428774 BUD13Q9BRD0 619 aaKnown RBP eCLIP11.61□□□□□ -0.55
CRIM1-204ENST00000428774 IL23AQ9NPF7 189 aa11.61□□□□□ -0.55
CRIM1-204ENST00000428774 CISHQ9NSE2 258 aa11.61□□□□□ -0.55
CRIM1-204ENST00000428774 SPTLC3Q9NUV7 552 aa11.61□□□□□ -0.55
CRIM1-204ENST00000428774 TBC1D13Q9NVG8 400 aa11.61□□□□□ -0.55
CRIM1-204ENST00000428774 HCSTQ9UBK5 93 aa11.61□□□□□ -0.55
CRIM1-204ENST00000428774 HMGXB4Q9UGU5 601 aa11.61□□□□□ -0.55
CRIM1-204ENST00000428774 NOCTQ9UK39 431 aaKnown RBP11.61□□□□□ -0.55
CRIM1-204ENST00000428774 NME7Q9Y5B8 376 aa11.61□□□□□ -0.55
CRIM1-204ENST00000428774 VWA8A3KMH1 1905 aa11.6□□□□□ -0.55
Retrieved 100 of 20,778 RNA–protein pairs in 56.8 ms