RNA–Protein interactions for RNA: ENST00000428307.6

HDAC9-210, Transcript of histone deacetylase 9, humanhuman

TSL 2 BASIC

Gene HDAC9, Length 2,359 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC9-210ENST00000428307 RUBCNQ92622 972 aa11.1□□□□□ -0.63
HDAC9-210ENST00000428307 CD101Q93033 1021 aa11.1□□□□□ -0.63
HDAC9-210ENST00000428307 WNT8AQ9H1J5 351 aa11.1□□□□□ -0.63
HDAC9-210ENST00000428307 CDHR5Q9HBB8 845 aa11.1□□□□□ -0.63
HDAC9-210ENST00000428307 SIX4Q9UIU6 781 aa11.1□□□□□ -0.63
HDAC9-210ENST00000428307 MROH7Q68CQ1 1323 aa11.1□□□□□ -0.63
HDAC9-210ENST00000428307 TSPAN1O60635 241 aa11.09□□□□□ -0.63
HDAC9-210ENST00000428307 MCF2P10911 925 aa11.09□□□□□ -0.63
HDAC9-210ENST00000428307 ASPAP45381 313 aa11.09□□□□□ -0.63
HDAC9-210ENST00000428307 ZNF132P52740 706 aa11.09□□□□□ -0.63
HDAC9-210ENST00000428307 ORC1Q13415 861 aa11.09□□□□□ -0.63
HDAC9-210ENST00000428307 SLC10A6Q3KNW5 377 aa11.09□□□□□ -0.63
HDAC9-210ENST00000428307 GLIPR1L2Q4G1C9 344 aa11.09□□□□□ -0.63
HDAC9-210ENST00000428307 NAP1L3Q99457 506 aaPredicted RBP11.09□□□□□ -0.63
HDAC9-210ENST00000428307 TRIM31Q9BZY9 425 aa11.09□□□□□ -0.63
HDAC9-210ENST00000428307 VIPAS39Q9H9C1 493 aa11.09□□□□□ -0.63
HDAC9-210ENST00000428307 PCDHA3Q9Y5H8 950 aa11.09□□□□□ -0.63
HDAC9-210ENST00000428307 COL1A2P08123 1366 aa11.09□□□□□ -0.63
HDAC9-210ENST00000428307 TCRBV7S2A1N4TA0A589 114 aa11.09□□□□□ -0.63
HDAC9-210ENST00000428307 CCDC66A2RUB6 948 aa11.09□□□□□ -0.63
HDAC9-210ENST00000428307 A6NJR5 290 aa11.09□□□□□ -0.63
HDAC9-210ENST00000428307 IL18RAPO95256 599 aa11.09□□□□□ -0.63
HDAC9-210ENST00000428307 HOXD8P13378 290 aaPredicted RBP11.09□□□□□ -0.63
HDAC9-210ENST00000428307 GGCXP38435 758 aa11.09□□□□□ -0.63
HDAC9-210ENST00000428307 PAK2Q13177 524 aa11.09□□□□□ -0.63
HDAC9-210ENST00000428307 MAMLD1Q13495 774 aa11.09□□□□□ -0.63
HDAC9-210ENST00000428307 TERF2Q15554 542 aa11.09□□□□□ -0.63
HDAC9-210ENST00000428307 LIN9Q5TKA1 542 aa11.09□□□□□ -0.63
HDAC9-210ENST00000428307 EMBQ6PCB8 327 aa11.09□□□□□ -0.63
HDAC9-210ENST00000428307 MAATS1Q7Z4T9 603 aa11.09□□□□□ -0.63
HDAC9-210ENST00000428307 TLK2Q86UE8 772 aa11.09□□□□□ -0.63
HDAC9-210ENST00000428307 IFNLR1Q8IU57 520 aaPredicted RBP11.09□□□□□ -0.63
HDAC9-210ENST00000428307 ZDHHC14Q8IZN3 488 aa11.09□□□□□ -0.63
HDAC9-210ENST00000428307 UBR7Q8N806 425 aa11.09□□□□□ -0.63
HDAC9-210ENST00000428307 TSEN2Q8NCE0 465 aaKnown RBP11.09□□□□□ -0.63
HDAC9-210ENST00000428307 CCDC26Q8TAB7 109 aa11.09□□□□□ -0.63
HDAC9-210ENST00000428307 TFAP2BQ92481 460 aa11.09□□□□□ -0.63
HDAC9-210ENST00000428307 KAT2BQ92831 832 aa11.09□□□□□ -0.63
HDAC9-210ENST00000428307 ACBD3Q9H3P7 528 aa11.09□□□□□ -0.63
HDAC9-210ENST00000428307 VPS18Q9P253 973 aa11.09□□□□□ -0.63
HDAC9-210ENST00000428307 GNEQ9Y223 722 aaKnown RBP11.09□□□□□ -0.63
HDAC9-210ENST00000428307 GOLGA6L10A0A0M3HER8 536 aa11.08□□□□□ -0.64
HDAC9-210ENST00000428307 A0A1B0GUA9 196 aa11.08□□□□□ -0.64
HDAC9-210ENST00000428307 DAPK3O43293 454 aa11.08□□□□□ -0.64
HDAC9-210ENST00000428307 SMIM10L2AP0DMW4 78 aa11.08□□□□□ -0.64
HDAC9-210ENST00000428307 SMIM10L2BP0DMW5 78 aa11.08□□□□□ -0.64
HDAC9-210ENST00000428307 MYBL1P10243 752 aa11.08□□□□□ -0.64
HDAC9-210ENST00000428307 CD19P15391 556 aa11.08□□□□□ -0.64
HDAC9-210ENST00000428307 TNFRSF8P28908 595 aa11.08□□□□□ -0.64
HDAC9-210ENST00000428307 CTNNA1P35221 906 aaKnown RBP11.08□□□□□ -0.64
HDAC9-210ENST00000428307 BEX3Q00994 111 aa11.08□□□□□ -0.64
HDAC9-210ENST00000428307 ZNF667Q5HYK9 610 aa11.08□□□□□ -0.64
HDAC9-210ENST00000428307 SEL1L2Q5TEA6 688 aa11.08□□□□□ -0.64
HDAC9-210ENST00000428307 TRIM72Q6ZMU5 477 aa11.08□□□□□ -0.64
HDAC9-210ENST00000428307 SAPCD2Q86UD0 394 aa11.08□□□□□ -0.64
HDAC9-210ENST00000428307 MSL3Q8N5Y2 521 aaKnown RBP11.08□□□□□ -0.64
HDAC9-210ENST00000428307 TRIM11Q96F44 468 aa11.08□□□□□ -0.64
HDAC9-210ENST00000428307 AVENQ9NQS1 362 aaPredicted RBP11.08□□□□□ -0.64
HDAC9-210ENST00000428307 RNF19AQ9NV58 838 aa11.08□□□□□ -0.64
HDAC9-210ENST00000428307 FAN1Q9Y2M0 1017 aa11.08□□□□□ -0.64
HDAC9-210ENST00000428307 PLXNB2O15031 1838 aa11.08□□□□□ -0.64
HDAC9-210ENST00000428307 CEP350Q5VT06 3117 aa11.08□□□□□ -0.64
HDAC9-210ENST00000428307 GOLGA6BA6NDN3 693 aa11.08□□□□□ -0.64
HDAC9-210ENST00000428307 MANSC4A6NHS7 340 aaPredicted RBP11.08□□□□□ -0.64
HDAC9-210ENST00000428307 SYF2O95926 243 aaKnown RBP11.08□□□□□ -0.64
HDAC9-210ENST00000428307 ZNF865P0CJ78 1059 aaPredicted RBP11.08□□□□□ -0.64
HDAC9-210ENST00000428307 RWDD2BP57060 319 aa11.08□□□□□ -0.64
HDAC9-210ENST00000428307 LACTBP83111 547 aaPredicted RBP11.08□□□□□ -0.64
HDAC9-210ENST00000428307 ZNF200P98182 395 aaPredicted RBP11.08□□□□□ -0.64
HDAC9-210ENST00000428307 GABPB1Q06547 395 aaPredicted RBP11.08□□□□□ -0.64
HDAC9-210ENST00000428307 HIC1Q14526 733 aa11.08□□□□□ -0.64
HDAC9-210ENST00000428307 CHADLQ6NUI6 762 aa11.08□□□□□ -0.64
HDAC9-210ENST00000428307 C1orf131Q8NDD1 294 aaKnown RBP11.08□□□□□ -0.64
HDAC9-210ENST00000428307 C18orf8Q96DM3 657 aa11.08□□□□□ -0.64
HDAC9-210ENST00000428307 ACAP3Q96P50 834 aa11.08□□□□□ -0.64
HDAC9-210ENST00000428307 OSMRQ99650 979 aa11.08□□□□□ -0.64
HDAC9-210ENST00000428307 ADPGKQ9BRR6 497 aa11.08□□□□□ -0.64
HDAC9-210ENST00000428307 TRIM51Q9BSJ1 452 aa11.08□□□□□ -0.64
HDAC9-210ENST00000428307 CXCL16Q9H2A7 254 aa11.08□□□□□ -0.64
HDAC9-210ENST00000428307 DPH5Q9H2P9 285 aa11.08□□□□□ -0.64
HDAC9-210ENST00000428307 SLITRK6Q9H5Y7 841 aa11.08□□□□□ -0.64
HDAC9-210ENST00000428307 USTQ9Y2C2 406 aa11.08□□□□□ -0.64
HDAC9-210ENST00000428307 SIP14410 1827 aa11.07□□□□□ -0.64
HDAC9-210ENST00000428307 RRN3P2A6NIE6 340 aa11.07□□□□□ -0.64
HDAC9-210ENST00000428307 AGPSO00116 658 aa11.07□□□□□ -0.64
HDAC9-210ENST00000428307 O00370 1275 aa11.07□□□□□ -0.64
HDAC9-210ENST00000428307 TLR3O15455 904 aaKnown RBP11.07□□□□□ -0.64
HDAC9-210ENST00000428307 POLR2BP30876 1174 aaKnown RBP11.07□□□□□ -0.64
HDAC9-210ENST00000428307 SSR1P43307 286 aaKnown RBP11.07□□□□□ -0.64
HDAC9-210ENST00000428307 RPL7AP62424 266 aaKnown RBP11.07□□□□□ -0.64
HDAC9-210ENST00000428307 POU5F1Q01860 360 aaKnown RBP11.07□□□□□ -0.64
HDAC9-210ENST00000428307 PTP4A2Q12974 167 aa11.07□□□□□ -0.64
HDAC9-210ENST00000428307 RGMBQ6NW40 437 aa11.07□□□□□ -0.64
HDAC9-210ENST00000428307 C17orf99Q6UX52 265 aa11.07□□□□□ -0.64
HDAC9-210ENST00000428307 PHF13Q86YI8 300 aaPredicted RBP11.07□□□□□ -0.64
HDAC9-210ENST00000428307 IFNL1Q8IU54 200 aa11.07□□□□□ -0.64
HDAC9-210ENST00000428307 PRELID2Q8N945 189 aa11.07□□□□□ -0.64
HDAC9-210ENST00000428307 ASB7Q9H672 318 aa11.07□□□□□ -0.64
HDAC9-210ENST00000428307 SMYD3Q9H7B4 428 aa11.07□□□□□ -0.64
HDAC9-210ENST00000428307 AGAP1Q9UPQ3 857 aa11.07□□□□□ -0.64
Retrieved 100 of 20,778 RNA–protein pairs in 19.5 ms