RNA–Protein interactions for RNA: ENST00000428014.1

SMC1A-203, Transcript of structural maintenance of chromosomes 1A, humanhuman

TSL 3

Gene SMC1A, Length 868 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMC1A-203ENST00000428014 SYCP3Q8IZU3 236 aa9.9□□□□□ -0.82
SMC1A-203ENST00000428014 GPD1LQ8N335 351 aa9.9□□□□□ -0.82
SMC1A-203ENST00000428014 C3orf58Q8NDZ4 430 aa9.9□□□□□ -0.82
SMC1A-203ENST00000428014 SPATA20Q8TB22 786 aa9.9□□□□□ -0.82
SMC1A-203ENST00000428014 C2orf15Q8WU43 125 aaKnown RBP9.9□□□□□ -0.82
SMC1A-203ENST00000428014 PAGE5Q96GU1 130 aa9.9□□□□□ -0.82
SMC1A-203ENST00000428014 FAXDC2Q96IV6 333 aa9.9□□□□□ -0.82
SMC1A-203ENST00000428014 ZNF560Q96MR9 790 aa9.9□□□□□ -0.82
SMC1A-203ENST00000428014 PRKD2Q9BZL6 878 aa9.9□□□□□ -0.82
SMC1A-203ENST00000428014 KCNH6Q9H252 994 aa9.9□□□□□ -0.82
SMC1A-203ENST00000428014 FAM124BQ9H5Z6 455 aaPredicted RBP9.9□□□□□ -0.82
SMC1A-203ENST00000428014 WDR6Q9NNW5 1121 aaKnown RBP9.9□□□□□ -0.82
SMC1A-203ENST00000428014 ZMYM5Q9UJ78 669 aa9.9□□□□□ -0.82
SMC1A-203ENST00000428014 ITGA11Q9UKX5 1188 aa9.9□□□□□ -0.82
SMC1A-203ENST00000428014 USP20Q9Y2K6 914 aa9.9□□□□□ -0.82
SMC1A-203ENST00000428014 ANK1P16157 1881 aa9.89□□□□□ -0.83
SMC1A-203ENST00000428014 SOBPA7XYQ1 873 aa9.89□□□□□ -0.83
SMC1A-203ENST00000428014 DCXO43602 365 aa9.89□□□□□ -0.83
SMC1A-203ENST00000428014 XYLBO75191 536 aa9.89□□□□□ -0.83
SMC1A-203ENST00000428014 PRKCSHP14314 528 aaPredicted RBP9.89□□□□□ -0.83
SMC1A-203ENST00000428014 EPCAMP16422 314 aa9.89□□□□□ -0.83
SMC1A-203ENST00000428014 TNFSF9P41273 254 aa9.89□□□□□ -0.83
SMC1A-203ENST00000428014 CASP5P51878 434 aa9.89□□□□□ -0.83
SMC1A-203ENST00000428014 LILRA4P59901 499 aa9.89□□□□□ -0.83
SMC1A-203ENST00000428014 GLRA4Q5JXX5 417 aa9.89□□□□□ -0.83
SMC1A-203ENST00000428014 VARS2Q5ST30 1063 aaKnown RBP9.89□□□□□ -0.83
SMC1A-203ENST00000428014 LIN9Q5TKA1 542 aa9.89□□□□□ -0.83
SMC1A-203ENST00000428014 C9orf57Q5W0N0 161 aa9.89□□□□□ -0.83
SMC1A-203ENST00000428014 ARMCX5Q6P1M9 558 aa9.89□□□□□ -0.83
SMC1A-203ENST00000428014 KRBA2Q6ZNG9 492 aa9.89□□□□□ -0.83
SMC1A-203ENST00000428014 LIMS2Q7Z4I7 341 aa9.89□□□□□ -0.83
SMC1A-203ENST00000428014 USP37Q86T82 979 aa9.89□□□□□ -0.83
SMC1A-203ENST00000428014 WDR49Q8IV35 697 aa9.89□□□□□ -0.83
SMC1A-203ENST00000428014 UBALD2Q8IYN6 164 aa9.89□□□□□ -0.83
SMC1A-203ENST00000428014 TMEM86AQ8N2M4 240 aa9.89□□□□□ -0.83
SMC1A-203ENST00000428014 KREMEN2Q8NCW0 462 aa9.89□□□□□ -0.83
SMC1A-203ENST00000428014 SCFD1Q8WVM8 642 aa9.89□□□□□ -0.83
SMC1A-203ENST00000428014 ACSF2Q96CM8 615 aaPredicted RBP9.89□□□□□ -0.83
SMC1A-203ENST00000428014 GSDMAQ96QA5 445 aa9.89□□□□□ -0.83
SMC1A-203ENST00000428014 PANK2Q9BZ23 570 aa9.89□□□□□ -0.83
SMC1A-203ENST00000428014 VRTNQ9H8Y1 702 aa9.89□□□□□ -0.83
SMC1A-203ENST00000428014 MAN1C1Q9NR34 630 aa9.89□□□□□ -0.83
SMC1A-203ENST00000428014 AGPAT3Q9NRZ7 376 aa9.89□□□□□ -0.83
SMC1A-203ENST00000428014 GDAP2Q9NXN4 497 aa9.89□□□□□ -0.83
SMC1A-203ENST00000428014 IGSF9Q9P2J2 1179 aa9.89□□□□□ -0.83
SMC1A-203ENST00000428014 EPS15L1Q9UBC2 864 aa9.89□□□□□ -0.83
SMC1A-203ENST00000428014 AFF4Q9UHB7 1163 aaKnown RBP9.89□□□□□ -0.83
SMC1A-203ENST00000428014 HOOK1Q9UJC3 728 aaKnown RBP9.89□□□□□ -0.83
SMC1A-203ENST00000428014 TRAF3IP3Q9Y228 551 aa9.89□□□□□ -0.83
SMC1A-203ENST00000428014 IKBKBO14920 756 aa9.88□□□□□ -0.83
SMC1A-203ENST00000428014 TGFB1I1O43294 461 aa9.88□□□□□ -0.83
SMC1A-203ENST00000428014 ZNF202O95125 648 aa9.88□□□□□ -0.83
SMC1A-203ENST00000428014 MYBP10242 640 aa9.88□□□□□ -0.83
SMC1A-203ENST00000428014 ODC1P11926 461 aa9.88□□□□□ -0.83
SMC1A-203ENST00000428014 MCM4P33991 863 aa9.88□□□□□ -0.83
SMC1A-203ENST00000428014 HOXD13P35453 343 aa9.88□□□□□ -0.83
SMC1A-203ENST00000428014 ACOT2P49753 483 aa9.88□□□□□ -0.83
SMC1A-203ENST00000428014 TAF6P49848 677 aa9.88□□□□□ -0.83
SMC1A-203ENST00000428014 OSTNP61366 133 aa9.88□□□□□ -0.83
SMC1A-203ENST00000428014 YWHAHQ04917 246 aaPredicted RBP9.88□□□□□ -0.83
SMC1A-203ENST00000428014 FAM160A1Q05DH4 1040 aa9.88□□□□□ -0.83
SMC1A-203ENST00000428014 KCNA1Q09470 495 aa9.88□□□□□ -0.83
SMC1A-203ENST00000428014 DPYDQ12882 1025 aa9.88□□□□□ -0.83
SMC1A-203ENST00000428014 GPR17Q13304 367 aa9.88□□□□□ -0.83
SMC1A-203ENST00000428014 SV2CQ496J9 727 aa9.88□□□□□ -0.83
SMC1A-203ENST00000428014 JADE1Q6IE81 842 aa9.88□□□□□ -0.83
SMC1A-203ENST00000428014 CLEC17AQ6ZS10 378 aa9.88□□□□□ -0.83
SMC1A-203ENST00000428014 EP400NLQ6ZTU2 488 aa9.88□□□□□ -0.83
SMC1A-203ENST00000428014 GUF1Q8N442 669 aaKnown RBP9.88□□□□□ -0.83
SMC1A-203ENST00000428014 XXYLT1Q8NBI6 393 aa9.88□□□□□ -0.83
SMC1A-203ENST00000428014 ENGASEQ8NFI3 743 aa9.88□□□□□ -0.83
SMC1A-203ENST00000428014 CXorf38Q8TB03 319 aa9.88□□□□□ -0.83
SMC1A-203ENST00000428014 ZNF707Q96C28 371 aaPredicted RBP9.88□□□□□ -0.83
SMC1A-203ENST00000428014 CXCL16Q9H2A7 254 aa9.88□□□□□ -0.83
SMC1A-203ENST00000428014 EXOC1Q9NV70 894 aa9.88□□□□□ -0.83
SMC1A-203ENST00000428014 DMAC2Q9NW81 257 aa9.88□□□□□ -0.83
SMC1A-203ENST00000428014 RMND1Q9NWS8 449 aa9.88□□□□□ -0.83
SMC1A-203ENST00000428014 RBAKQ9NYW8 714 aaPredicted RBP9.88□□□□□ -0.83
SMC1A-203ENST00000428014 SERTAD1Q9UHV2 236 aa9.88□□□□□ -0.83
SMC1A-203ENST00000428014 ASB3Q9Y575 518 aa9.88□□□□□ -0.83
SMC1A-203ENST00000428014 A0A1B0GVL5 298 aa9.87□□□□□ -0.83
SMC1A-203ENST00000428014 GOLGA6L4A6NEF3 574 aa9.87□□□□□ -0.83
SMC1A-203ENST00000428014 PRR33A8MZF0 331 aa9.87□□□□□ -0.83
SMC1A-203ENST00000428014 F8W810 466 aa9.87□□□□□ -0.83
SMC1A-203ENST00000428014 RBAK-RBAKDNI3L0D1 243 aa9.87□□□□□ -0.83
SMC1A-203ENST00000428014 PRPF6O94906 941 aaKnown RBP9.87□□□□□ -0.83
SMC1A-203ENST00000428014 FGF19O95750 216 aa9.87□□□□□ -0.83
SMC1A-203ENST00000428014 TKTP29401 623 aaKnown RBP9.87□□□□□ -0.83
SMC1A-203ENST00000428014 OR1D2P34982 312 aa9.87□□□□□ -0.83
SMC1A-203ENST00000428014 NDUFA8P51970 172 aa9.87□□□□□ -0.83
SMC1A-203ENST00000428014 EPHA5P54756 1037 aa9.87□□□□□ -0.83
SMC1A-203ENST00000428014 ROR1Q01973 937 aa9.87□□□□□ -0.83
SMC1A-203ENST00000428014 PLD1Q13393 1074 aa9.87□□□□□ -0.83
SMC1A-203ENST00000428014 CUL4BQ13620 913 aa9.87□□□□□ -0.83
SMC1A-203ENST00000428014 PSMD6Q15008 389 aa9.87□□□□□ -0.83
SMC1A-203ENST00000428014 DUOXA2Q1HG44 320 aa9.87□□□□□ -0.83
SMC1A-203ENST00000428014 EDRF1Q3B7T1 1238 aa9.87□□□□□ -0.83
SMC1A-203ENST00000428014 FMR1NBQ8N0W7 255 aaPredicted RBP9.87□□□□□ -0.83
SMC1A-203ENST00000428014 TOP6BLQ8N6T0 577 aa9.87□□□□□ -0.83
SMC1A-203ENST00000428014 AUTS2Q8WXX7 1259 aa9.87□□□□□ -0.83
Retrieved 100 of 20,778 RNA–protein pairs in 20.9 ms